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The map label for this gene is ndoA [H]

Identifier: 50084190

GI number: 50084190

Start: 973629

End: 973934

Strand: Direct

Name: ndoA [H]

Synonym: ACIAD0986

Alternate gene names: 50084190

Gene position: 973629-973934 (Clockwise)

Preceding gene: 50084187

Following gene: 50084191

Centisome position: 27.06

GC content: 40.52

Gene sequence:

>306_bases
ATGAGTTGGATTTCAGTTTGTGGCATTGATGATGTCTCGGAAGATGAACCAAAAGCAGTAGAGATTAATGACAAAAAGAT
TGGCGTATTTGTGATTGATGAAAACTATTTCGCAATCGAAAACGTTTGTCCGCATGCCTTTGCATTACTGACAGAAGGGT
TTATTGAAGATCAGACGGTTGAATGTCCGCTGCATGAAGCTATTTTTGATATCCAAACAGGGCAATTAAAAAGTGGACCA
GGCTGCCGCGATCTTTGTACATATCCTGTACGTGTTGAAGATCAGCAGATCCAGATTCAACTGTGA

Upstream 100 bases:

>100_bases
TAAAATTATTGACATAAAATCAATAAGCGCATTATGCTGTGCTTATGTTTTGAAAATAAACTAATGTTTTGTATATAAAA
CAATATCGAGGGCTCAAACG

Downstream 100 bases:

>100_bases
GGGAAAAGGAATTTTGCTATGAAACAATTTAATGAAAAACTGGCTAACTGGATGAGCCCATCGCCATCAAAAGAAGCGGG
TATTAACAATATTCAGATTC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSWISVCGIDDVSEDEPKAVEINDKKIGVFVIDENYFAIENVCPHAFALLTEGFIEDQTVECPLHEAIFDIQTGQLKSGP
GCRDLCTYPVRVEDQQIQIQL

Sequences:

>Translated_101_residues
MSWISVCGIDDVSEDEPKAVEINDKKIGVFVIDENYFAIENVCPHAFALLTEGFIEDQTVECPLHEAIFDIQTGQLKSGP
GCRDLCTYPVRVEDQQIQIQL
>Mature_100_residues
SWISVCGIDDVSEDEPKAVEINDKKIGVFVIDENYFAIENVCPHAFALLTEGFIEDQTVECPLHEAIFDIQTGQLKSGPG
CRDLCTYPVRVEDQQIQIQL

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=103, Percent_Identity=40.7766990291262, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 11331; Mature: 11200

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWISVCGIDDVSEDEPKAVEINDKKIGVFVIDENYFAIENVCPHAFALLTEGFIEDQTV
CCEEEECCCCCCCCCCCCEEEECCCEEEEEEECCCEEEECCCCCHHHHHHHCCCCCCCEE
ECPLHEAIFDIQTGQLKSGPGCRDLCTYPVRVEDQQIQIQL
CCCHHHHHEECCCCCCCCCCCCHHHCCCCEEECCCEEEEEC
>Mature Secondary Structure 
SWISVCGIDDVSEDEPKAVEINDKKIGVFVIDENYFAIENVCPHAFALLTEGFIEDQTV
CEEEECCCCCCCCCCCCEEEECCCEEEEEEECCCEEEECCCCCHHHHHHHCCCCCCCEE
ECPLHEAIFDIQTGQLKSGPGCRDLCTYPVRVEDQQIQIQL
CCCHHHHHEECCCCCCCCCCCCHHHCCCCEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA