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The map label for this gene is yceD [C]

Identifier: 50084079

GI number: 50084079

Start: 853175

End: 853735

Strand: Direct

Name: yceD [C]

Synonym: ACIAD0868

Alternate gene names: 50084079

Gene position: 853175-853735 (Clockwise)

Preceding gene: 50084076

Following gene: 50084080

Centisome position: 23.71

GC content: 41.35

Gene sequence:

>561_bases
ATGTCAGCAAATACCTTTCCGGCACAGATTGAGCCGTATAAATGGGCTGAACAAGGCTTTACATGGTCAGGAACACTGCC
ATTGTCTCGCTTTGCTCGTATTGCTCGTGAAGCTGTTGGGTCAATTAATGATCAATTGATCTATATAGACTGTAAACTAT
CAATGGATGCGTATCATCGTATTGTATGGTTTGAGGGTCATATTGAAACAAAAGTACCATTAGAGTGCCAGCGTTGTCTG
GAACCTGTGGAAATTCCTCTTGTTTCAGATTTCCGTCTTGCCTTGGTCGATGATGAGTCACTGATAGAGCGCTTGGATGA
GGATGCTGATTTCATCGTTTTAGGTGAAAGTGAATCTTCGACAAAGGGTGATTTTGCCACTCCTGCGACTGTCGATTTAC
TTTCTCTACTAGAAGATGAACTGTTACTGTTGATGCCTCTGTCTCCCAAGCATGATGCCTGTGAACATAAACATCAACCT
ACCGTTCAGGACATTGTTGAAGAAAAACGTGATAATCCGTTTGATGTTTTAGCAAGTTTGAAAGGTAAACTTAACTCATA
A

Upstream 100 bases:

>100_bases
GCATTGCTTAATTTACCCCGAGTTCTGTCGAAATTAGTACAAAATTGTATCTTAATCTTTGACAGAGTACTGATGAATTT
GTAGAATTGCCGCCTTAATT

Downstream 100 bases:

>100_bases
GTGTTATACTTGTGGGCTAAGATAACTGAATTTGTTCTGATCCATTTTTTCGATCTTTGTAAGGAGCCATCATGGCCGTT
CAGCAAAACCGTAAAAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSANTFPAQIEPYKWAEQGFTWSGTLPLSRFARIAREAVGSINDQLIYIDCKLSMDAYHRIVWFEGHIETKVPLECQRCL
EPVEIPLVSDFRLALVDDESLIERLDEDADFIVLGESESSTKGDFATPATVDLLSLLEDELLLLMPLSPKHDACEHKHQP
TVQDIVEEKRDNPFDVLASLKGKLNS

Sequences:

>Translated_186_residues
MSANTFPAQIEPYKWAEQGFTWSGTLPLSRFARIAREAVGSINDQLIYIDCKLSMDAYHRIVWFEGHIETKVPLECQRCL
EPVEIPLVSDFRLALVDDESLIERLDEDADFIVLGESESSTKGDFATPATVDLLSLLEDELLLLMPLSPKHDACEHKHQP
TVQDIVEEKRDNPFDVLASLKGKLNS
>Mature_185_residues
SANTFPAQIEPYKWAEQGFTWSGTLPLSRFARIAREAVGSINDQLIYIDCKLSMDAYHRIVWFEGHIETKVPLECQRCLE
PVEIPLVSDFRLALVDDESLIERLDEDADFIVLGESESSTKGDFATPATVDLLSLLEDELLLLMPLSPKHDACEHKHQPT
VQDIVEEKRDNPFDVLASLKGKLNS

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yceD [H]

Homologues:

Organism=Escherichia coli, GI1787329, Length=188, Percent_Identity=28.1914893617021, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 21000; Mature: 20869

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANTFPAQIEPYKWAEQGFTWSGTLPLSRFARIAREAVGSINDQLIYIDCKLSMDAYHR
CCCCCCCCCCCCCCHHHCCCEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEE
IVWFEGHIETKVPLECQRCLEPVEIPLVSDFRLALVDDESLIERLDEDADFIVLGESESS
EEEEECCCCCCCCHHHHHCCCCCCCCEECCCEEEEECCHHHHHHHCCCCCEEEEECCCCC
TKGDFATPATVDLLSLLEDELLLLMPLSPKHDACEHKHQPTVQDIVEEKRDNPFDVLASL
CCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHHH
KGKLNS
HCCCCC
>Mature Secondary Structure 
SANTFPAQIEPYKWAEQGFTWSGTLPLSRFARIAREAVGSINDQLIYIDCKLSMDAYHR
CCCCCCCCCCCCCHHHCCCEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEE
IVWFEGHIETKVPLECQRCLEPVEIPLVSDFRLALVDDESLIERLDEDADFIVLGESESS
EEEEECCCCCCCCHHHHHCCCCCCCCEECCCEEEEECCHHHHHHHCCCCCEEEEECCCCC
TKGDFATPATVDLLSLLEDELLLLMPLSPKHDACEHKHQPTVQDIVEEKRDNPFDVLASL
CCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHHH
KGKLNS
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]