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The map label for this gene is scpB [H]

Identifier: 50084074

GI number: 50084074

Start: 849304

End: 849894

Strand: Reverse

Name: scpB [H]

Synonym: ACIAD0862

Alternate gene names: 50084074

Gene position: 849894-849304 (Counterclockwise)

Preceding gene: 50084075

Following gene: 50084073

Centisome position: 23.62

GC content: 40.61

Gene sequence:

>591_bases
ATGACCATTGATCAAAGTTCAGCACTTTCGCTTGAAGATATTCATCATGAAGTCTTGTTACAAATCGAGGCAATTCTGTT
TGCCAGCGATGTTCCTATTTCATTGGCCCGTTTAAAAGAAGCTTTTCAAAATCAGTATAATAAACAACAGCTTCGTCATT
TTTTACAACAACTTGCCGTTTTACAGCACGGTCGTTCAATTGAATTAATTGAGACTGCTCAAGGTTTTAGGTTTCAGGTT
CGATCAAAATATCGTAATATGATCGCGCAAGTATGGCCCGAACGTCCGACTAAGCTATCTCCCTCCCTTCTTGAAACGAT
TGCGGTGATTGCTTATCACCAGCCTGTGACTCGTGCGGATATTGAACAAATTCGTGGCGTTTCAAATAACAGTCAAATTT
TAAGAATGTTATTTGAATGGAACTGGATTAAAGAGTCTGGTTTTAGAGACTTGCCCGGAAGACCTGCGTTGTTGATTACA
ACGCCTCAATTTTTGAATGCATTTGGCTTGGTTTCTCTAGGTCAATTGCCTCCCCTGCAGGATGCCAAGGACGCGTTTAT
GAGTTTGGATGTGAATACACCCAAGTCATAA

Upstream 100 bases:

>100_bases
TCGTTACATTTATGGCCATTTTAGAACTAACACGCCAGCAAAAGATTAAAATCATTGCTTCTGGAGTAGAGGCTCCGCTC
GCAATTCAAGGAGCTCAAGT

Downstream 100 bases:

>100_bases
ATCGGTGAACTGTTGACAATTATTTCTAAGGTTATGCTGTCATGAGTGAAAAATTGCAAAAAGTATTAGCGCGAATTGGT
TTAGGTTCTCGCAGATATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTIDQSSALSLEDIHHEVLLQIEAILFASDVPISLARLKEAFQNQYNKQQLRHFLQQLAVLQHGRSIELIETAQGFRFQV
RSKYRNMIAQVWPERPTKLSPSLLETIAVIAYHQPVTRADIEQIRGVSNNSQILRMLFEWNWIKESGFRDLPGRPALLIT
TPQFLNAFGLVSLGQLPPLQDAKDAFMSLDVNTPKS

Sequences:

>Translated_196_residues
MTIDQSSALSLEDIHHEVLLQIEAILFASDVPISLARLKEAFQNQYNKQQLRHFLQQLAVLQHGRSIELIETAQGFRFQV
RSKYRNMIAQVWPERPTKLSPSLLETIAVIAYHQPVTRADIEQIRGVSNNSQILRMLFEWNWIKESGFRDLPGRPALLIT
TPQFLNAFGLVSLGQLPPLQDAKDAFMSLDVNTPKS
>Mature_195_residues
TIDQSSALSLEDIHHEVLLQIEAILFASDVPISLARLKEAFQNQYNKQQLRHFLQQLAVLQHGRSIELIETAQGFRFQVR
SKYRNMIAQVWPERPTKLSPSLLETIAVIAYHQPVTRADIEQIRGVSNNSQILRMLFEWNWIKESGFRDLPGRPALLITT
PQFLNAFGLVSLGQLPPLQDAKDAFMSLDVNTPKS

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 22360; Mature: 22229

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDQSSALSLEDIHHEVLLQIEAILFASDVPISLARLKEAFQNQYNKQQLRHFLQQLAV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LQHGRSIELIETAQGFRFQVRSKYRNMIAQVWPERPTKLSPSLLETIAVIAYHQPVTRAD
HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
IEQIRGVSNNSQILRMLFEWNWIKESGFRDLPGRPALLITTPQFLNAFGLVSLGQLPPLQ
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCC
DAKDAFMSLDVNTPKS
HHHHHHEEECCCCCCC
>Mature Secondary Structure 
TIDQSSALSLEDIHHEVLLQIEAILFASDVPISLARLKEAFQNQYNKQQLRHFLQQLAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LQHGRSIELIETAQGFRFQVRSKYRNMIAQVWPERPTKLSPSLLETIAVIAYHQPVTRAD
HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
IEQIRGVSNNSQILRMLFEWNWIKESGFRDLPGRPALLITTPQFLNAFGLVSLGQLPPLQ
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCC
DAKDAFMSLDVNTPKS
HHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]