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The map label for this gene is pilJ [H]

Identifier: 50084004

GI number: 50084004

Start: 776556

End: 777989

Strand: Direct

Name: pilJ [H]

Synonym: ACIAD0789

Alternate gene names: 50084004

Gene position: 776556-777989 (Clockwise)

Preceding gene: 50084003

Following gene: 50084005

Centisome position: 21.58

GC content: 36.68

Gene sequence:

>1434_bases
ATGGAATCAATCAATCGGAAAAAAAATAAAGCGTTACAACAGCCACATTTTAAAACAGACACTTTTTTTTCATCGTTTTC
TTCTAAACTCAAGCAGTTTTCGAATTATTTTGAATCACCGCAAAAGGCTCGTTCTTTATTACAGGTTATTTTAACCTGTT
TGGCATTCTCTTTTATTTTTTCACTTTTTTTATGTCAACATTCAATTTACACAAGTAAAGTAGATAAAAGCCTGATTCAG
CTAAGTATTTTAAATCATCGCTTTTTATCACAATCTTTGGAAACCATTCGTTCCGATGCCGCTCAAAATCGCCAACTTTT
GAATGAAGCACAGAAGTCATTTAAACATGAAATGACCTATTTAGATGACTCTTCAACCGAATTTCAAAATGTAAATCAGG
CATGGCAACAGTTATCGCGTAGTATTGATCAGATTCAAGCTCATCCAGAGTTGTTAAAACAGGTTCAGTATTTGCATCTG
GCAATGCAGCTTTCCATGCCAGAAATTCAGGCAAATTATGCTCAATTGATTGAGCGTATGCGGAGCCAGCAAGCACCTCT
TGCTGAAATTAAAGTTGCACAGCAGCAAGAATTACTGGCCAGCAAATTATTGAAATGGATTAATACGCCAATTTTACCAG
AGCAAACTTCACCTGCATCGGTGTATATATTTTTAGATGACTTCAAAGTATTTCGTTCAAATATCGATCTTCAATTAAAT
GGTCAGTCTGTATCAGCATTCGACCCACAATCACGCATCCTATTACAAAATATTCATCTGGAATATGAAAGTGCTTTGCA
ACCTAAACTCAATCGGGTATTTCAACGCCCTAATGAAATTGAGCAGTTATGGCAGGCTTACTGGAAGCTTCCCACACAAT
CAGAAAAACTGATGGATATGCTGGATGAGTTTGCCCAGTCAAAAAACAGTTTGTTATCAATGCTGGTTTCAGGATTACTC
ATCATTTTTTTGATGATTATGACTTATGCTTTGATTCGTCTAATTCGGTTGCGCCGTGCTGAAACACCGCCAAGTGAAGT
ACTACAAACCGAAGACAGCATGCAAAATCAGAATGCGATTTTAAGATTATTGAATGAAATGAGTGATTTTGTAGAGGGTG
ATCTAAGACGTCAGGCGACAGTTTCAGAGGCATTTACTGGTACGATTGCAGATGCTTTAAATATTATCGTGCAACAAAAG
AAAGACTTGATTCGGTGTGTACAGCACAATATTGATGGTATTGAAAAAGCGATAAAAACATTGACGCATTCTAAGCAAAA
GCTTGTCGCCTTACAGCAAAATCATCAGGGTTTAGAGACTCTAAATCAAACTGAGCAGTTAGAGTTGGCTCAATGTGTTT
ATCAGCTTAATGAGATTATTCAGACATTACGTACTGCCATCATGACGTATAAGCTTGATTTTGCATCTGAGTAA

Upstream 100 bases:

>100_bases
TTTTTTATTTAGTCAATTATTAAAAAATACAGATTTTATGAATGCTTCACAATATTGATGATGAAGAGGTATGCAGATGC
TGTAATGGGGGATAAACATC

Downstream 100 bases:

>100_bases
AGATGAGATTTGTTTGAATCAGATGTGTTTTATAAAAGGGTAAAATGCAATGGAAAACGGGGTTTATTTACAAGACATGA
TGTTATGGATGCACAAGTAA

Product: type IV pilus biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MESINRKKNKALQQPHFKTDTFFSSFSSKLKQFSNYFESPQKARSLLQVILTCLAFSFIFSLFLCQHSIYTSKVDKSLIQ
LSILNHRFLSQSLETIRSDAAQNRQLLNEAQKSFKHEMTYLDDSSTEFQNVNQAWQQLSRSIDQIQAHPELLKQVQYLHL
AMQLSMPEIQANYAQLIERMRSQQAPLAEIKVAQQQELLASKLLKWINTPILPEQTSPASVYIFLDDFKVFRSNIDLQLN
GQSVSAFDPQSRILLQNIHLEYESALQPKLNRVFQRPNEIEQLWQAYWKLPTQSEKLMDMLDEFAQSKNSLLSMLVSGLL
IIFLMIMTYALIRLIRLRRAETPPSEVLQTEDSMQNQNAILRLLNEMSDFVEGDLRRQATVSEAFTGTIADALNIIVQQK
KDLIRCVQHNIDGIEKAIKTLTHSKQKLVALQQNHQGLETLNQTEQLELAQCVYQLNEIIQTLRTAIMTYKLDFASE

Sequences:

>Translated_477_residues
MESINRKKNKALQQPHFKTDTFFSSFSSKLKQFSNYFESPQKARSLLQVILTCLAFSFIFSLFLCQHSIYTSKVDKSLIQ
LSILNHRFLSQSLETIRSDAAQNRQLLNEAQKSFKHEMTYLDDSSTEFQNVNQAWQQLSRSIDQIQAHPELLKQVQYLHL
AMQLSMPEIQANYAQLIERMRSQQAPLAEIKVAQQQELLASKLLKWINTPILPEQTSPASVYIFLDDFKVFRSNIDLQLN
GQSVSAFDPQSRILLQNIHLEYESALQPKLNRVFQRPNEIEQLWQAYWKLPTQSEKLMDMLDEFAQSKNSLLSMLVSGLL
IIFLMIMTYALIRLIRLRRAETPPSEVLQTEDSMQNQNAILRLLNEMSDFVEGDLRRQATVSEAFTGTIADALNIIVQQK
KDLIRCVQHNIDGIEKAIKTLTHSKQKLVALQQNHQGLETLNQTEQLELAQCVYQLNEIIQTLRTAIMTYKLDFASE
>Mature_477_residues
MESINRKKNKALQQPHFKTDTFFSSFSSKLKQFSNYFESPQKARSLLQVILTCLAFSFIFSLFLCQHSIYTSKVDKSLIQ
LSILNHRFLSQSLETIRSDAAQNRQLLNEAQKSFKHEMTYLDDSSTEFQNVNQAWQQLSRSIDQIQAHPELLKQVQYLHL
AMQLSMPEIQANYAQLIERMRSQQAPLAEIKVAQQQELLASKLLKWINTPILPEQTSPASVYIFLDDFKVFRSNIDLQLN
GQSVSAFDPQSRILLQNIHLEYESALQPKLNRVFQRPNEIEQLWQAYWKLPTQSEKLMDMLDEFAQSKNSLLSMLVSGLL
IIFLMIMTYALIRLIRLRRAETPPSEVLQTEDSMQNQNAILRLLNEMSDFVEGDLRRQATVSEAFTGTIADALNIIVQQK
KDLIRCVQHNIDGIEKAIKTLTHSKQKLVALQQNHQGLETLNQTEQLELAQCVYQLNEIIQTLRTAIMTYKLDFASE

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 55165; Mature: 55165

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESINRKKNKALQQPHFKTDTFFSSFSSKLKQFSNYFESPQKARSLLQVILTCLAFSFIF
CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SLFLCQHSIYTSKVDKSLIQLSILNHRFLSQSLETIRSDAAQNRQLLNEAQKSFKHEMTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDDSSTEFQNVNQAWQQLSRSIDQIQAHPELLKQVQYLHLAMQLSMPEIQANYAQLIERM
CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RSQQAPLAEIKVAQQQELLASKLLKWINTPILPEQTSPASVYIFLDDFKVFRSNIDLQLN
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHCCCCEEEC
GQSVSAFDPQSRILLQNIHLEYESALQPKLNRVFQRPNEIEQLWQAYWKLPTQSEKLMDM
CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
LDEFAQSKNSLLSMLVSGLLIIFLMIMTYALIRLIRLRRAETPPSEVLQTEDSMQNQNAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LRLLNEMSDFVEGDLRRQATVSEAFTGTIADALNIIVQQKKDLIRCVQHNIDGIEKAIKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LTHSKQKLVALQQNHQGLETLNQTEQLELAQCVYQLNEIIQTLRTAIMTYKLDFASE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MESINRKKNKALQQPHFKTDTFFSSFSSKLKQFSNYFESPQKARSLLQVILTCLAFSFIF
CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SLFLCQHSIYTSKVDKSLIQLSILNHRFLSQSLETIRSDAAQNRQLLNEAQKSFKHEMTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDDSSTEFQNVNQAWQQLSRSIDQIQAHPELLKQVQYLHLAMQLSMPEIQANYAQLIERM
CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RSQQAPLAEIKVAQQQELLASKLLKWINTPILPEQTSPASVYIFLDDFKVFRSNIDLQLN
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHCCCCEEEC
GQSVSAFDPQSRILLQNIHLEYESALQPKLNRVFQRPNEIEQLWQAYWKLPTQSEKLMDM
CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
LDEFAQSKNSLLSMLVSGLLIIFLMIMTYALIRLIRLRRAETPPSEVLQTEDSMQNQNAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LRLLNEMSDFVEGDLRRQATVSEAFTGTIADALNIIVQQKKDLIRCVQHNIDGIEKAIKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LTHSKQKLVALQQNHQGLETLNQTEQLELAQCVYQLNEIIQTLRTAIMTYKLDFASE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]