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The map label for this gene is yhbH [C]

Identifier: 50083888

GI number: 50083888

Start: 653294

End: 653647

Strand: Direct

Name: yhbH [C]

Synonym: ACIAD0658

Alternate gene names: 50083888

Gene position: 653294-653647 (Clockwise)

Preceding gene: 50083887

Following gene: 50083889

Centisome position: 18.15

GC content: 33.05

Gene sequence:

>354_bases
GTGAGGGATAGAACTATGCAGATAACAATTCGTGGACATCATTTAACTATAACACCTGCCATTGAAGAAAATATCAAATC
TAAATTTGGTGAGATGACCAAGCATTTAGATCAAGTCAATAGTATGCAGGTGAAACTTTCGAAAGATCATCAAATTGATA
AAAGAACGCACAAAGGGAGTTCAAATCATATTGCTGAAGCAATTGTACGCCTACCAGGCATTGAACTTTTTGCACAAGCG
TCTGCTGATGACATGTATACATCAATTAAAAAATTATCTGAAAAATTGAAACGTCAATTACAAAAACATCGAAAAATACA
ATGTACATATCAGCAAGTTATTGTTCCTATTTAA

Upstream 100 bases:

>100_bases
TTTTTCATCGAAGGAATAGTTTAAATGATTTGACGATTGCATTTTATAGTTAATTTCTGTCTTTAGATCATTTGGCTATA
CCTTTATATCCTGATAGAAG

Downstream 100 bases:

>100_bases
TTTTTTGATCTTTAAAGAGGCTAGAGATTAGCCTCTTTTTTTATGTATAAAATGTAGCGACGTACTAAATTATCTCTATG
ATTTATAGTAGAATGATGAG

Product: sigma(54) modulation protein RpoX

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MRDRTMQITIRGHHLTITPAIEENIKSKFGEMTKHLDQVNSMQVKLSKDHQIDKRTHKGSSNHIAEAIVRLPGIELFAQA
SADDMYTSIKKLSEKLKRQLQKHRKIQCTYQQVIVPI

Sequences:

>Translated_117_residues
MRDRTMQITIRGHHLTITPAIEENIKSKFGEMTKHLDQVNSMQVKLSKDHQIDKRTHKGSSNHIAEAIVRLPGIELFAQA
SADDMYTSIKKLSEKLKRQLQKHRKIQCTYQQVIVPI
>Mature_117_residues
MRDRTMQITIRGHHLTITPAIEENIKSKFGEMTKHLDQVNSMQVKLSKDHQIDKRTHKGSSNHIAEAIVRLPGIELFAQA
SADDMYTSIKKLSEKLKRQLQKHRKIQCTYQQVIVPI

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=99, Percent_Identity=34.3434343434343, Blast_Score=62, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 13530; Mature: 13530

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDRTMQITIRGHHLTITPAIEENIKSKFGEMTKHLDQVNSMQVKLSKDHQIDKRTHKGS
CCCCEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCC
SNHIAEAIVRLPGIELFAQASADDMYTSIKKLSEKLKRQLQKHRKIQCTYQQVIVPI
CHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEECC
>Mature Secondary Structure
MRDRTMQITIRGHHLTITPAIEENIKSKFGEMTKHLDQVNSMQVKLSKDHQIDKRTHKGS
CCCCEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCC
SNHIAEAIVRLPGIELFAQASADDMYTSIKKLSEKLKRQLQKHRKIQCTYQQVIVPI
CHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8206826 [H]