| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is btuB [H]
Identifier: 50083867
GI number: 50083867
Start: 622432
End: 624327
Strand: Reverse
Name: btuB [H]
Synonym: ACIAD0634
Alternate gene names: 50083867
Gene position: 624327-622432 (Counterclockwise)
Preceding gene: 50083872
Following gene: 50083866
Centisome position: 17.35
GC content: 35.28
Gene sequence:
>1896_bases ATGTATGGAGCACAATACATGTCTATTTCTTTTCAGCCTACCCGTTTAGTGGGGGCGATTGCAATTGCAATGGGGTTTTC TTCAACAACTGTTTTTGCTGATGATTCAACAGATGCAACTAAACTTGATCCAATTGTAGTGACTGCATCAAAATCTGAGG AAAAAGTCAGTCAGGTTCCCGCACGGATTACAGTGATTTCTAAAAAAGAAATTGAAAAAAATCCTATCTCAAATTTATCA GATGTTTTACAACAGGATGCATCCATTTATATCAAACAAAATGGTGGTCTTGGACAAGTTGCAGACTTATCATTAAGAAG TGGTAGATCAGGATCAACCTTATTGTTAAAAAATGGCGCTAGATTAAATACTCAAAATAGTTTCGGCCCTGTTTCACCTG AATTTATGGATTTAACTGATGTCGATCAAATTGAAATATTAAAAGGTCCAGCATCGGTACAATATGGATCTGATGCAATT AGTGGTGTAATCAACTTAATATCAAAAACACCAACTAAATCAGGTGTCAATTTGACAGGGATTTATGGTGAGAACAACAC TTATAAATCTATTTTGAATGCAGACTATGTTGATGCTTCGGGTTTCTATACACAAGTAGGTGGACAACGTTTAGAATCTG ATGGAACACGAATACTTAGTAGTCAAAATAAAAATGACAAAGCAGGCTTTGATCAAAAAGGCTATCATGCGAAATTCGGT TATCAAAAAAATGCTGTAGATACAAGTATTTCAATTAGTGAGAATCAAGGTACCAATGTGTATTGGGACTCAACTATAGA CTCAAATACAGGAATCCGCGATTTTAAAAATCAATTGATCAATTGGTTAGGTTCATACCAATTGAATTCTGATATTAAAG TAAATGCACGCTATTCAAATATAAAAAACATAAGTGAATCAACTGATACAGATTGGCAAACATTTCAACCAGCCACTAGC CATTACAATACTGAGACAAATGAAGGTGATCTAAACGCTATTTGGAAATTTACAGCGCATCAAAATATTTTAGCTGGCGT TACATATAGCAAGTCAGAATACGACTCTTCATCCTCTCCTGAAGCTGTACGCAATATCAACACCACAGGTTACTATTTAC AGCATCAATATCAAAATAATGGCTTTAACACACAAGCTGGTGTCCGCTTAGAAGATAATGATTGGTTTGGTACGCATACC GTAGGGCAGATTGCAGCACGTTATCAGCTTTTACCACTTACAAGTATCTATGCCAATATTGGTACAGCATTTAAAGCGCC AACTCTTGAAAATTTATATGGCTCTTATGGTAATACATTTTACAGTAATCCAAACTTAAAACCAGAAGAAAGTACCTCCT ACGAAATTGGGGTAGACCAGAAACTAAACTATGGCTTATCGGCTTATATTTCTGCATATTCTACTGATGTTAAAAACTTG ATTAGCTCAGGTAAAATAGATGGAAAAACAACCTATATAAATGTAAATAAAGCCACAATTCAGGGTGGTGAAATTGGCTT AAAATGGGCATTAGATAATTTATTTGCAAATGCTGAGTATGCATACTCAAAAGCACAAAATAAAGCGACTAAGTCAGATA CTTCTTATCGACCTCGTCAAACCTATACACTCACACTAGGTTATGATGATGGTGTCTATGGCGTGAATACTGCATTGATT TCTCGATCAAAAGCCAATACAAGTGCCGCAAATGTTAAAGTCTCAGGTTACGCGACAATTGATCTAAATGCCTTTTGGAA TGTTAACTCAAATGTAAAACTTTTTACTAATATTCAAAATATTGGTGATATACAAAATATTGTGGTTAATGACTTTGGCT CAGAATATGTTAACGGTGGCCGCCTTGCCTCAGTTGGTGTAACACTCAGTTATTAA
Upstream 100 bases:
>100_bases AGATGTGGGAAGGTGAATATGCTTGTCTCTTTTTGAGATGCCATTTGAGTCCGGAGACCTGCTTGTTACATCTATCCACT CAATCATTCACGTGGGGTGA
Downstream 100 bases:
>100_bases TCCAGCAGTCCAATAAAAATATTTTCTTAACTCCATTTTCAGGGTAATGTTCTTGACCGATATTACCCTTTTTTTATTGC ATCCAATTGATTAGTCTACA
Product: vitamin B12 receptor precursor
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 631; Mature: 631
Protein sequence:
>631_residues MYGAQYMSISFQPTRLVGAIAIAMGFSSTTVFADDSTDATKLDPIVVTASKSEEKVSQVPARITVISKKEIEKNPISNLS DVLQQDASIYIKQNGGLGQVADLSLRSGRSGSTLLLKNGARLNTQNSFGPVSPEFMDLTDVDQIEILKGPASVQYGSDAI SGVINLISKTPTKSGVNLTGIYGENNTYKSILNADYVDASGFYTQVGGQRLESDGTRILSSQNKNDKAGFDQKGYHAKFG YQKNAVDTSISISENQGTNVYWDSTIDSNTGIRDFKNQLINWLGSYQLNSDIKVNARYSNIKNISESTDTDWQTFQPATS HYNTETNEGDLNAIWKFTAHQNILAGVTYSKSEYDSSSSPEAVRNINTTGYYLQHQYQNNGFNTQAGVRLEDNDWFGTHT VGQIAARYQLLPLTSIYANIGTAFKAPTLENLYGSYGNTFYSNPNLKPEESTSYEIGVDQKLNYGLSAYISAYSTDVKNL ISSGKIDGKTTYINVNKATIQGGEIGLKWALDNLFANAEYAYSKAQNKATKSDTSYRPRQTYTLTLGYDDGVYGVNTALI SRSKANTSAANVKVSGYATIDLNAFWNVNSNVKLFTNIQNIGDIQNIVVNDFGSEYVNGGRLASVGVTLSY
Sequences:
>Translated_631_residues MYGAQYMSISFQPTRLVGAIAIAMGFSSTTVFADDSTDATKLDPIVVTASKSEEKVSQVPARITVISKKEIEKNPISNLS DVLQQDASIYIKQNGGLGQVADLSLRSGRSGSTLLLKNGARLNTQNSFGPVSPEFMDLTDVDQIEILKGPASVQYGSDAI SGVINLISKTPTKSGVNLTGIYGENNTYKSILNADYVDASGFYTQVGGQRLESDGTRILSSQNKNDKAGFDQKGYHAKFG YQKNAVDTSISISENQGTNVYWDSTIDSNTGIRDFKNQLINWLGSYQLNSDIKVNARYSNIKNISESTDTDWQTFQPATS HYNTETNEGDLNAIWKFTAHQNILAGVTYSKSEYDSSSSPEAVRNINTTGYYLQHQYQNNGFNTQAGVRLEDNDWFGTHT VGQIAARYQLLPLTSIYANIGTAFKAPTLENLYGSYGNTFYSNPNLKPEESTSYEIGVDQKLNYGLSAYISAYSTDVKNL ISSGKIDGKTTYINVNKATIQGGEIGLKWALDNLFANAEYAYSKAQNKATKSDTSYRPRQTYTLTLGYDDGVYGVNTALI SRSKANTSAANVKVSGYATIDLNAFWNVNSNVKLFTNIQNIGDIQNIVVNDFGSEYVNGGRLASVGVTLSY >Mature_631_residues MYGAQYMSISFQPTRLVGAIAIAMGFSSTTVFADDSTDATKLDPIVVTASKSEEKVSQVPARITVISKKEIEKNPISNLS DVLQQDASIYIKQNGGLGQVADLSLRSGRSGSTLLLKNGARLNTQNSFGPVSPEFMDLTDVDQIEILKGPASVQYGSDAI SGVINLISKTPTKSGVNLTGIYGENNTYKSILNADYVDASGFYTQVGGQRLESDGTRILSSQNKNDKAGFDQKGYHAKFG YQKNAVDTSISISENQGTNVYWDSTIDSNTGIRDFKNQLINWLGSYQLNSDIKVNARYSNIKNISESTDTDWQTFQPATS HYNTETNEGDLNAIWKFTAHQNILAGVTYSKSEYDSSSSPEAVRNINTTGYYLQHQYQNNGFNTQAGVRLEDNDWFGTHT VGQIAARYQLLPLTSIYANIGTAFKAPTLENLYGSYGNTFYSNPNLKPEESTSYEIGVDQKLNYGLSAYISAYSTDVKNL ISSGKIDGKTTYINVNKATIQGGEIGLKWALDNLFANAEYAYSKAQNKATKSDTSYRPRQTYTLTLGYDDGVYGVNTALI SRSKANTSAANVKVSGYATIDLNAFWNVNSNVKLFTNIQNIGDIQNIVVNDFGSEYVNGGRLASVGVTLSY
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: COG4206
COG function: function code H; Outer membrane cobalamin receptor protein
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=606, Percent_Identity=27.0627062706271, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1788478, Length=164, Percent_Identity=29.8780487804878, Blast_Score=86, Evalue=9e-18,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 68911; Mature: 68911
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGAQYMSISFQPTRLVGAIAIAMGFSSTTVFADDSTDATKLDPIVVTASKSEEKVSQVP CCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHCC ARITVISKKEIEKNPISNLSDVLQQDASIYIKQNGGLGQVADLSLRSGRSGSTLLLKNGA EEEEEEEHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEECCC RLNTQNSFGPVSPEFMDLTDVDQIEILKGPASVQYGSDAISGVINLISKTPTKSGVNLTG EECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEE IYGENNTYKSILNADYVDASGFYTQVGGQRLESDGTRILSSQNKNDKAGFDQKGYHAKFG EECCCCHHHHHCCCCCCCCCCCEECCCCCEECCCCCEEECCCCCCCCCCCCCCCCEEECC YQKNAVDTSISISENQGTNVYWDSTIDSNTGIRDFKNQLINWLGSYQLNSDIKVNARYSN CCCCCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCEEECCCEEEEEECCC IKNISESTDTDWQTFQPATSHYNTETNEGDLNAIWKFTAHQNILAGVTYSKSEYDSSSSP CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCC EAVRNINTTGYYLQHQYQNNGFNTQAGVRLEDNDWFGTHTVGQIAARYQLLPLTSIYANI HHHHCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHEEEEEHHHHHHHH GTAFKAPTLENLYGSYGNTFYSNPNLKPEESTSYEIGVDQKLNYGLSAYISAYSTDVKNL CCCCCCCCHHHHHHCCCCCEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHH ISSGKIDGKTTYINVNKATIQGGEIGLKWALDNLFANAEYAYSKAQNKATKSDTSYRPRQ HHCCCCCCEEEEEEEEEEEECCCCEEEEEEHHHHHCCCHHHHHHHHCCCCCCCCCCCCCE TYTLTLGYDDGVYGVNTALISRSKANTSAANVKVSGYATIDLNAFWNVNSNVKLFTNIQN EEEEEEECCCCCCCCCHHEEECCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEEECCC IGDIQNIVVNDFGSEYVNGGRLASVGVTLSY CCCHHHHHHHCCCHHHCCCCEEEEEEEEEEC >Mature Secondary Structure MYGAQYMSISFQPTRLVGAIAIAMGFSSTTVFADDSTDATKLDPIVVTASKSEEKVSQVP CCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHCC ARITVISKKEIEKNPISNLSDVLQQDASIYIKQNGGLGQVADLSLRSGRSGSTLLLKNGA EEEEEEEHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEECCC RLNTQNSFGPVSPEFMDLTDVDQIEILKGPASVQYGSDAISGVINLISKTPTKSGVNLTG EECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEE IYGENNTYKSILNADYVDASGFYTQVGGQRLESDGTRILSSQNKNDKAGFDQKGYHAKFG EECCCCHHHHHCCCCCCCCCCCEECCCCCEECCCCCEEECCCCCCCCCCCCCCCCEEECC YQKNAVDTSISISENQGTNVYWDSTIDSNTGIRDFKNQLINWLGSYQLNSDIKVNARYSN CCCCCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCEEECCCEEEEEECCC IKNISESTDTDWQTFQPATSHYNTETNEGDLNAIWKFTAHQNILAGVTYSKSEYDSSSSP CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCC EAVRNINTTGYYLQHQYQNNGFNTQAGVRLEDNDWFGTHTVGQIAARYQLLPLTSIYANI HHHHCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHEEEEEHHHHHHHH GTAFKAPTLENLYGSYGNTFYSNPNLKPEESTSYEIGVDQKLNYGLSAYISAYSTDVKNL CCCCCCCCHHHHHHCCCCCEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHH ISSGKIDGKTTYINVNKATIQGGEIGLKWALDNLFANAEYAYSKAQNKATKSDTSYRPRQ HHCCCCCCEEEEEEEEEEEECCCCEEEEEEHHHHHCCCHHHHHHHHCCCCCCCCCCCCCE TYTLTLGYDDGVYGVNTALISRSKANTSAANVKVSGYATIDLNAFWNVNSNVKLFTNIQN EEEEEEECCCCCCCCCHHEEECCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEEECCC IGDIQNIVVNDFGSEYVNGGRLASVGVTLSY CCCHHHHHHHCCCHHHCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11598060 [H]