| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is prc [H]
Identifier: 50083789
GI number: 50083789
Start: 544031
End: 546214
Strand: Direct
Name: prc [H]
Synonym: ACIAD0552
Alternate gene names: 50083789
Gene position: 544031-546214 (Clockwise)
Preceding gene: 50083786
Following gene: 50083790
Centisome position: 15.12
GC content: 44.92
Gene sequence:
>2184_bases ATGAAACTTCAAGTTATCGCATGTGCCGTTGCAGTTGCAACTGGCGGTTTTTTTTTCTCCCATGCCATTAATGAGGCGCT TGCTGCTACAGATACTGTTTCTGTTACCCAGTCGATTCAGCCGACCAAAGAGCAGGCATTGGTTTCTCGGCAGCTTGCAA CACTGGTCGATCGCCAGCATTATTTGAATATGCGTCTGGATGCAACCACATCCAATCGTATTCTAGATATGTATCTCGAT AGTCTTGATCCAGATCATTCTATTTTATTGGCATCAGAAGTCGCCGAATATAAGAAGAAATATGGCCCGACCTTTGGTGC AGCCCTCAAAGCAGGTGATTTGTCTGGTCCATTTGCAATTCATGCACAATACCGCGCCCGCCTTAAGGCGTTTTACGAAT ATGTACTTGGTGAGTTGAAAAAGCCGCAAAATCTCAAACAATCGAATGTCTATGTCGATACAGATCGTGAGAAGGCGCCT TACTTTAAAACTGTTGCTGAGCAGCAGGATTACTGGCGCAAAATGCTGGTTTCCCAGTTGATTAACCTTACCATCAGTAA AGAAGAAGATCTGGCCAAGCAAAAAGCCTTGAAAGACAATCCTGCTCTAGCCAATGGTCAAGACCTTGCCAGCGCAGAAG ATCTCACGCCAGTTCAAACCCTGACCAAGCGTTATACACGTCAGCTCGAACGAATTAATCGTGTGAAAAGTGATGATGTG CTGGATAAGACATTGAATGCCATGATGGCAACTTACGATCCACACAGTAATTATTATCCACCAATCGATGCAATGGAGTT GAATCGTCAGACCACTTTGCAACTTGAAGGTATTGGGGTGTCGATTCGTCCTGAGCGCGGTAATGAAGATTACACCAAAA TTGAAACCATCGTTGAAGGTGGGCCTGCGAGTAAATCAGGACAGATCAAATCGGGTGATCGCATTATCGGTGTTGCGCAA GATGGCGACAAAATGGTGGATGTGATTGGCTGGCCTAGCTCTGAAATTGTCGGCTTGATTCGCGGTAAACGTGGGACAAA AGTGACTATCAAGTTACTTGGACCAGGTGCTCAAATGAGTCAGGCACGTACTGTTACATTGGTACGTGATGTAATTCAAG AAGATGATGCAGGGGTGCGTTCACGTACTGTTGAGATTACCCGCGATGGTAAGAAACATGTATTTGGTGTGATTGAAATC CCATCATTCTATTTGAATTATCGCGCGCGTCGAGCAGGCACAGAGTATCGTTCTGTTTCTGAAGATACCAATAATGCATT GAAAGCACTTTCTGCAAAAAATGTGGAAGGCATCATCATAGACTTGCGGAATAATCCAGGTGGTTCTTTAGAAGAAGTTG CTCGTATGCTCGGGCAAGTGATTAAGTCGGGGCCTGTTGTACAAATCCGTGACGGCAATGGCAATGTCAGCGTTTTTGAA GACAATGACGGCGGTGCTCAAACCTATGCAGGTCCATTGGCTGTATTGATTAATCTGGCATCGGCATCGGCCAGTGAGAT TTATTCGGCAGCCATTCAAGATTATGAGCGTGGTGTAGTGATTGGAAGTACCACCACGGGTAAAGGGACTGCTCAGGTAC AGCTGGATAGTTTGGCCTATGGTCAGGCAACCCTCACGCAGCGTAAATTCTACCGTGTGACAGGCGGCAGTACTCAGAAT AAAGGCGTCATTCCAGACGTTAAGCTGGTCGATATTTATGATGAAGAGTTTGGTGAGCGTAAAGCCAAGAATGCTTTGAA ATGGGATACTATTCCAACAGCACCGTTCAAACGTGAAGGTTCAATCCAGCCGTATGTAACTAAGTTATCTCAGCTTTCTT TACAGCGTGTTGATAAAGATCCTCAGTTTACTTATCTGGAAACACGTAAGTCGATTGCACAGGAAACCAAAGATCAGAAA CGTGTTGTACTCGATATCGACCAGCGTAAGGCTGAAATTTTGTCACTTGAAAAGCAGACATTAGATGCCGAAAACAAACG TCGTCTTGCGACAGGTTTAAAACCGTATGCAAACTGGGAAAGTTATCAGGCCTCTCTGGATGCTCTTAGTGAGTCTAGAG CCAAAATGAAAGCCACGCAGCGTCCTGCACTTCCAGAAGAAGAAGCATTTGTGACAGAAGCGGGTAATGTGTTATTAGAC TATTCAAAATTGCAGGGTCATTAA
Upstream 100 bases:
>100_bases GATATATAGATCGAAGACTCGGCGTGTGGGGTTCATTGCATTTGAAATCAACATGGCAATTTTCCCTGATATAGGAAAGT TCAGGAAGTATTAAGAATTT
Downstream 100 bases:
>100_bases TCTGGTCTAGCAAACGCAGTATTTTAAAATAGCTGTAAATTTTTCAAGGCCCGTTTTGTTCTGAGATGATTTGATAGAAC GAAACGGGCTTTTTAATGCT
Product: carboxy-terminal protease for penicillin-binding protein
Products: NA
Alternate protein names: C-terminal-processing peptidase; PRC protein; Protease Re [H]
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MKLQVIACAVAVATGGFFFSHAINEALAATDTVSVTQSIQPTKEQALVSRQLATLVDRQHYLNMRLDATTSNRILDMYLD SLDPDHSILLASEVAEYKKKYGPTFGAALKAGDLSGPFAIHAQYRARLKAFYEYVLGELKKPQNLKQSNVYVDTDREKAP YFKTVAEQQDYWRKMLVSQLINLTISKEEDLAKQKALKDNPALANGQDLASAEDLTPVQTLTKRYTRQLERINRVKSDDV LDKTLNAMMATYDPHSNYYPPIDAMELNRQTTLQLEGIGVSIRPERGNEDYTKIETIVEGGPASKSGQIKSGDRIIGVAQ DGDKMVDVIGWPSSEIVGLIRGKRGTKVTIKLLGPGAQMSQARTVTLVRDVIQEDDAGVRSRTVEITRDGKKHVFGVIEI PSFYLNYRARRAGTEYRSVSEDTNNALKALSAKNVEGIIIDLRNNPGGSLEEVARMLGQVIKSGPVVQIRDGNGNVSVFE DNDGGAQTYAGPLAVLINLASASASEIYSAAIQDYERGVVIGSTTTGKGTAQVQLDSLAYGQATLTQRKFYRVTGGSTQN KGVIPDVKLVDIYDEEFGERKAKNALKWDTIPTAPFKREGSIQPYVTKLSQLSLQRVDKDPQFTYLETRKSIAQETKDQK RVVLDIDQRKAEILSLEKQTLDAENKRRLATGLKPYANWESYQASLDALSESRAKMKATQRPALPEEEAFVTEAGNVLLD YSKLQGH
Sequences:
>Translated_727_residues MKLQVIACAVAVATGGFFFSHAINEALAATDTVSVTQSIQPTKEQALVSRQLATLVDRQHYLNMRLDATTSNRILDMYLD SLDPDHSILLASEVAEYKKKYGPTFGAALKAGDLSGPFAIHAQYRARLKAFYEYVLGELKKPQNLKQSNVYVDTDREKAP YFKTVAEQQDYWRKMLVSQLINLTISKEEDLAKQKALKDNPALANGQDLASAEDLTPVQTLTKRYTRQLERINRVKSDDV LDKTLNAMMATYDPHSNYYPPIDAMELNRQTTLQLEGIGVSIRPERGNEDYTKIETIVEGGPASKSGQIKSGDRIIGVAQ DGDKMVDVIGWPSSEIVGLIRGKRGTKVTIKLLGPGAQMSQARTVTLVRDVIQEDDAGVRSRTVEITRDGKKHVFGVIEI PSFYLNYRARRAGTEYRSVSEDTNNALKALSAKNVEGIIIDLRNNPGGSLEEVARMLGQVIKSGPVVQIRDGNGNVSVFE DNDGGAQTYAGPLAVLINLASASASEIYSAAIQDYERGVVIGSTTTGKGTAQVQLDSLAYGQATLTQRKFYRVTGGSTQN KGVIPDVKLVDIYDEEFGERKAKNALKWDTIPTAPFKREGSIQPYVTKLSQLSLQRVDKDPQFTYLETRKSIAQETKDQK RVVLDIDQRKAEILSLEKQTLDAENKRRLATGLKPYANWESYQASLDALSESRAKMKATQRPALPEEEAFVTEAGNVLLD YSKLQGH >Mature_727_residues MKLQVIACAVAVATGGFFFSHAINEALAATDTVSVTQSIQPTKEQALVSRQLATLVDRQHYLNMRLDATTSNRILDMYLD SLDPDHSILLASEVAEYKKKYGPTFGAALKAGDLSGPFAIHAQYRARLKAFYEYVLGELKKPQNLKQSNVYVDTDREKAP YFKTVAEQQDYWRKMLVSQLINLTISKEEDLAKQKALKDNPALANGQDLASAEDLTPVQTLTKRYTRQLERINRVKSDDV LDKTLNAMMATYDPHSNYYPPIDAMELNRQTTLQLEGIGVSIRPERGNEDYTKIETIVEGGPASKSGQIKSGDRIIGVAQ DGDKMVDVIGWPSSEIVGLIRGKRGTKVTIKLLGPGAQMSQARTVTLVRDVIQEDDAGVRSRTVEITRDGKKHVFGVIEI PSFYLNYRARRAGTEYRSVSEDTNNALKALSAKNVEGIIIDLRNNPGGSLEEVARMLGQVIKSGPVVQIRDGNGNVSVFE DNDGGAQTYAGPLAVLINLASASASEIYSAAIQDYERGVVIGSTTTGKGTAQVQLDSLAYGQATLTQRKFYRVTGGSTQN KGVIPDVKLVDIYDEEFGERKAKNALKWDTIPTAPFKREGSIQPYVTKLSQLSLQRVDKDPQFTYLETRKSIAQETKDQK RVVLDIDQRKAEILSLEKQTLDAENKRRLATGLKPYANWESYQASLDALSESRAKMKATQRPALPEEEAFVTEAGNVLLD YSKLQGH
Specific function: Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 (PBP3). May be involved in protection of the bacterium from thermal and osmotic stresses [H]
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1788134, Length=743, Percent_Identity=33.9165545087483, Blast_Score=354, Evalue=1e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR005151 - InterPro: IPR004447 - InterPro: IPR020992 [H]
Pfam domain/function: PF11818 DUF3340; PF00595 PDZ; PF03572 Peptidase_S41 [H]
EC number: =3.4.21.102 [H]
Molecular weight: Translated: 80361; Mature: 80361
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQVIACAVAVATGGFFFSHAINEALAATDTVSVTQSIQPTKEQALVSRQLATLVDRQH CCEEEEEHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH YLNMRLDATTSNRILDMYLDSLDPDHSILLASEVAEYKKKYGPTFGAALKAGDLSGPFAI HEEEEEECCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCHHHHEECCCCCCCEEE HAQYRARLKAFYEYVLGELKKPQNLKQSNVYVDTDREKAPYFKTVAEQQDYWRKMLVSQL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH INLTISKEEDLAKQKALKDNPALANGQDLASAEDLTPVQTLTKRYTRQLERINRVKSDDV HCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH LDKTLNAMMATYDPHSNYYPPIDAMELNRQTTLQLEGIGVSIRPERGNEDYTKIETIVEG HHHHHHHHHEEECCCCCCCCCCCHHHCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCC GPASKSGQIKSGDRIIGVAQDGDKMVDVIGWPSSEIVGLIRGKRGTKVTIKLLGPGAQMS CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHEECCCCCEEEEEEECCCCCHH QARTVTLVRDVIQEDDAGVRSRTVEITRDGKKHVFGVIEIPSFYLNYRARRAGTEYRSVS HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHCCCHHHHCC EDTNNALKALSAKNVEGIIIDLRNNPGGSLEEVARMLGQVIKSGPVVQIRDGNGNVSVFE HHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEE DNDGGAQTYAGPLAVLINLASASASEIYSAAIQDYERGVVIGSTTTGKGTAQVQLDSLAY CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCCC GQATLTQRKFYRVTGGSTQNKGVIPDVKLVDIYDEEFGERKAKNALKWDTIPTAPFKREG CCHHHHHCEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCC SIQPYVTKLSQLSLQRVDKDPQFTYLETRKSIAQETKDQKRVVLDIDQRKAEILSLEKQT CCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHH LDAENKRRLATGLKPYANWESYQASLDALSESRAKMKATQRPALPEEEAFVTEAGNVLLD CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEE YSKLQGH HHHHCCC >Mature Secondary Structure MKLQVIACAVAVATGGFFFSHAINEALAATDTVSVTQSIQPTKEQALVSRQLATLVDRQH CCEEEEEHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH YLNMRLDATTSNRILDMYLDSLDPDHSILLASEVAEYKKKYGPTFGAALKAGDLSGPFAI HEEEEEECCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCHHHHEECCCCCCCEEE HAQYRARLKAFYEYVLGELKKPQNLKQSNVYVDTDREKAPYFKTVAEQQDYWRKMLVSQL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH INLTISKEEDLAKQKALKDNPALANGQDLASAEDLTPVQTLTKRYTRQLERINRVKSDDV HCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH LDKTLNAMMATYDPHSNYYPPIDAMELNRQTTLQLEGIGVSIRPERGNEDYTKIETIVEG HHHHHHHHHEEECCCCCCCCCCCHHHCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCC GPASKSGQIKSGDRIIGVAQDGDKMVDVIGWPSSEIVGLIRGKRGTKVTIKLLGPGAQMS CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHEECCCCCEEEEEEECCCCCHH QARTVTLVRDVIQEDDAGVRSRTVEITRDGKKHVFGVIEIPSFYLNYRARRAGTEYRSVS HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHCCCHHHHCC EDTNNALKALSAKNVEGIIIDLRNNPGGSLEEVARMLGQVIKSGPVVQIRDGNGNVSVFE HHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEE DNDGGAQTYAGPLAVLINLASASASEIYSAAIQDYERGVVIGSTTTGKGTAQVQLDSLAY CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCCC GQATLTQRKFYRVTGGSTQNKGVIPDVKLVDIYDEEFGERKAKNALKWDTIPTAPFKREG CCHHHHHCEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCC SIQPYVTKLSQLSLQRVDKDPQFTYLETRKSIAQETKDQKRVVLDIDQRKAEILSLEKQT CCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHH LDAENKRRLATGLKPYANWESYQASLDALSESRAKMKATQRPALPEEEAFVTEAGNVLLD CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEE YSKLQGH HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1856173; 1729701; 9097040; 9278503; 1447154; 10049386; 7499412; 8576225 [H]