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The map label for this gene is soxC [H]

Identifier: 50083681

GI number: 50083681

Start: 425141

End: 426397

Strand: Direct

Name: soxC [H]

Synonym: ACIAD0427

Alternate gene names: 50083681

Gene position: 425141-426397 (Clockwise)

Preceding gene: 50083677

Following gene: 50083682

Centisome position: 11.81

GC content: 42.8

Gene sequence:

>1257_bases
ATGAGTCATTTAAATGTCGCTCATAGTGAAGAATATCGAGCAAATTCTGTGCCATTTAATTTTTTTGAGCACACACAAGA
TGCGCACATTATTCGTTCAGATGAAGAAGCAGTTGAAACTGCAAAAAAGCTCGCACAAACATTTGCCAAAGAAGCATCGT
TGCGTGATCAGGAGCGCCGCTTACCATTGAATGAAATCCAGCAATTTTCACAAAGTGGATTATGGGCGATCACTGTCCCT
AAGTCATTTGGTGGTGCGGGCGTCAGTTATCGGACTGTGGCAGAAGTGATTAAAACCATTTCAAGTGTGGATCCTTCTCT
GGGTCAGATTCCACAAAATCATTTAGTATTTATTGAGCATTTGCGTTTGGATGCGAGTCCAGAACAGCAAAAGTTCTTTT
TTAATCTGGTGTTAAAAGGGACACGTTTAGGCAATGCCTTTTCTGAAAAAAATGCAAAAACTGTTGCAGATTTAGAAACG
ACCATTCGCAAAACTGACAAGGGTTATGAAATTAATGGGCAAAAATTTTTTGCTACAGGGGCTTTGTTGGCACATTGGAT
TCCAATCGTTGCAGTGAATGAGGATGGCTTGCCCGTTGCAGCATTGGTACCACAACATACTTCAGGTGTAAATATTATTA
ATGACTGGTCTGGTTTTGGGCAGCGCACAACAGCAAGTGGAACGGTTGAATTAAATCAGGTTGAGGTCAATGAAAATTAT
CTGGTGCCTATTCACCATGCATTTGAACGCCCAACGCCAGCAGGTGCGATTTCACAGTTTATTCAGGCAGCAGTTGATGC
AGGAATTGCACGAGGTGCAATTGAAGAAACGATTGGTTATGTCAAAACACATAGTCGACCATGGATTGATTCAGGGCTTG
AACGTGCAACTGACGATCCTTATACCATTGCCAGCATTGGTGATCTAAAAATCAAGTTGCGTGCTGCCGAAGCTGTTCTG
GATTTGGCAGCCGACCAGATTGATCAGGCAATTGTACAACCTAGCGAAGAAAATGTCGCACAAGCGACCTTACTTGTGGC
GGAAGCAAAAGTACTGACTACTGAAATTGCTTTGTTGGCAAGTAATAAGCTATTTGAGTTATCAGGAACACGTTCAACCT
TGTCAGAGCTGAATCTGGACCGCCACTGGCGTAATGCACGAACTCACACATTACATGATCCTGTGCGCTGGAAGTATCAC
ATTGTGGGTAACTATTACTTAAATAATGTACAGCCGCCACGCCATCCGTGGAGTTAA

Upstream 100 bases:

>100_bases
ACAATTCATAAACAATGCGTTAATCTCTATAAGTGAGCCCATTTTTTGGTGTTATGTTGTTGTCACAAATAAGCACAATT
CATCAAGAGGGTAGATCAGA

Downstream 100 bases:

>100_bases
GGAAAAAGCTAAAACAAAGATAAAAATGAGGATTAAACCATGAGTCAATTTGAACATATTCAAGAGCAGCTTTCTTTAGG
TGCAGATTATGAAACGGTTG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSHLNVAHSEEYRANSVPFNFFEHTQDAHIIRSDEEAVETAKKLAQTFAKEASLRDQERRLPLNEIQQFSQSGLWAITVP
KSFGGAGVSYRTVAEVIKTISSVDPSLGQIPQNHLVFIEHLRLDASPEQQKFFFNLVLKGTRLGNAFSEKNAKTVADLET
TIRKTDKGYEINGQKFFATGALLAHWIPIVAVNEDGLPVAALVPQHTSGVNIINDWSGFGQRTTASGTVELNQVEVNENY
LVPIHHAFERPTPAGAISQFIQAAVDAGIARGAIEETIGYVKTHSRPWIDSGLERATDDPYTIASIGDLKIKLRAAEAVL
DLAADQIDQAIVQPSEENVAQATLLVAEAKVLTTEIALLASNKLFELSGTRSTLSELNLDRHWRNARTHTLHDPVRWKYH
IVGNYYLNNVQPPRHPWS

Sequences:

>Translated_418_residues
MSHLNVAHSEEYRANSVPFNFFEHTQDAHIIRSDEEAVETAKKLAQTFAKEASLRDQERRLPLNEIQQFSQSGLWAITVP
KSFGGAGVSYRTVAEVIKTISSVDPSLGQIPQNHLVFIEHLRLDASPEQQKFFFNLVLKGTRLGNAFSEKNAKTVADLET
TIRKTDKGYEINGQKFFATGALLAHWIPIVAVNEDGLPVAALVPQHTSGVNIINDWSGFGQRTTASGTVELNQVEVNENY
LVPIHHAFERPTPAGAISQFIQAAVDAGIARGAIEETIGYVKTHSRPWIDSGLERATDDPYTIASIGDLKIKLRAAEAVL
DLAADQIDQAIVQPSEENVAQATLLVAEAKVLTTEIALLASNKLFELSGTRSTLSELNLDRHWRNARTHTLHDPVRWKYH
IVGNYYLNNVQPPRHPWS
>Mature_417_residues
SHLNVAHSEEYRANSVPFNFFEHTQDAHIIRSDEEAVETAKKLAQTFAKEASLRDQERRLPLNEIQQFSQSGLWAITVPK
SFGGAGVSYRTVAEVIKTISSVDPSLGQIPQNHLVFIEHLRLDASPEQQKFFFNLVLKGTRLGNAFSEKNAKTVADLETT
IRKTDKGYEINGQKFFATGALLAHWIPIVAVNEDGLPVAALVPQHTSGVNIINDWSGFGQRTTASGTVELNQVEVNENYL
VPIHHAFERPTPAGAISQFIQAAVDAGIARGAIEETIGYVKTHSRPWIDSGLERATDDPYTIASIGDLKIKLRAAEAVLD
LAADQIDQAIVQPSEENVAQATLLVAEAKVLTTEIALLASNKLFELSGTRSTLSELNLDRHWRNARTHTLHDPVRWKYHI
VGNYYLNNVQPPRHPWS

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4501859, Length=372, Percent_Identity=24.4623655913978, Blast_Score=70, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17508101, Length=382, Percent_Identity=24.3455497382199, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 46334; Mature: 46202

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLNVAHSEEYRANSVPFNFFEHTQDAHIIRSDEEAVETAKKLAQTFAKEASLRDQERR
CCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHC
LPLNEIQQFSQSGLWAITVPKSFGGAGVSYRTVAEVIKTISSVDPSLGQIPQNHLVFIEH
CCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEE
LRLDASPEQQKFFFNLVLKGTRLGNAFSEKNAKTVADLETTIRKTDKGYEINGQKFFATG
EECCCCCHHHHHHEEHEEECCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEECCCEEEEHH
ALLAHWIPIVAVNEDGLPVAALVPQHTSGVNIINDWSGFGQRTTASGTVELNQVEVNENY
HHHHHCCEEEEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEECCCE
LVPIHHAFERPTPAGAISQFIQAAVDAGIARGAIEETIGYVKTHSRPWIDSGLERATDDP
EEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
YTIASIGDLKIKLRAAEAVLDLAADQIDQAIVQPSEENVAQATLLVAEAKVLTTEIALLA
EEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SNKLFELSGTRSTLSELNLDRHWRNARTHTLHDPVRWKYHIVGNYYLNNVQPPRHPWS
CCCEEEECCCHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SHLNVAHSEEYRANSVPFNFFEHTQDAHIIRSDEEAVETAKKLAQTFAKEASLRDQERR
CCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHC
LPLNEIQQFSQSGLWAITVPKSFGGAGVSYRTVAEVIKTISSVDPSLGQIPQNHLVFIEH
CCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEE
LRLDASPEQQKFFFNLVLKGTRLGNAFSEKNAKTVADLETTIRKTDKGYEINGQKFFATG
EECCCCCHHHHHHEEHEEECCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEECCCEEEEHH
ALLAHWIPIVAVNEDGLPVAALVPQHTSGVNIINDWSGFGQRTTASGTVELNQVEVNENY
HHHHHCCEEEEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEECCCE
LVPIHHAFERPTPAGAISQFIQAAVDAGIARGAIEETIGYVKTHSRPWIDSGLERATDDP
EEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
YTIASIGDLKIKLRAAEAVLDLAADQIDQAIVQPSEENVAQATLLVAEAKVLTTEIALLA
EEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SNKLFELSGTRSTLSELNLDRHWRNARTHTLHDPVRWKYHIVGNYYLNNVQPPRHPWS
CCCEEEECCCHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]