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The map label for this gene is cbpA [H]

Identifier: 50083662

GI number: 50083662

Start: 407001

End: 407942

Strand: Reverse

Name: cbpA [H]

Synonym: ACIAD0406

Alternate gene names: 50083662

Gene position: 407942-407001 (Counterclockwise)

Preceding gene: 50083663

Following gene: 50083661

Centisome position: 11.34

GC content: 41.93

Gene sequence:

>942_bases
ATGGCACAAAATTATTATGAAGAACTTGGAGTCACCCGCGATGCAACTCCAGATGAAATAAAAAAGAGCTATCGCAAACT
TGCCCGAAAGTATCATCCCGATGTAAGTAAGGAGGCAGATGCTGAGGCTAAAATGCAGGCAATCAATGTCGCTTACGATA
CACTCAGCAATCCAGAGAAAAAAACTGAATATGATCAAATGCTAGATCATCCTCAAGGCTTTTCTGGTTTTGGACAAGGT
ACTCCAGGTGGTGCAGGTTTTGATGGTGGACAATTTTACCAGCAAGGTCATGCTTCCGATTTTAGTGGCTTTGAAGATTT
ATTTGGTCGTTTCGGAGCGGGTTTTGGTGGCAGTAATCAGCAGTATCAACGCCAGACACGTAGCTATCGCGGTGAAGATC
AACATGCCAGTATTGAAGTTGATCTTGAGGTTGCCTATCACGGTACTACCCAGAATCTGACTTTACAGATTCCAACCTTA
AATGCTTATGGTGAGCCTGAAGTTCAGCGTAAAACTTTACAAGTGAAAATTCCAAAAGGAATGAAAGAAGGCCAGCAAAT
CCGCTTGAATGGACAAGGTCAGGCTGGAATCAACGGCGGTGAAAATGGTGATCTTTACATTGAAATTCAATATAAAGACA
CTGATCGGATACACGTTGAAGGTGTTGATGTTTATTACACTATTGATGTTGCACCATGGGAAGCTGCACTCGGTAAAAAT
ATTGAAGTGATGACTCCAAGTGGACGCTTGAATGTCAATTTACCTAAAAATGCCCGAACAGGTCAGCAGTTGCGTTTGAA
AGATAAAGGCATTCCAAACAAAACACCTGGAAATCTTTATCTGGTGTTGAATATTGTATTGCCAGAAGCACAAACTGAAC
AACAACAGCAAGCCTATGAAACACTCGCTCAGGCATTTGCCTCATTTAAGCCACGTGGATAA

Upstream 100 bases:

>100_bases
TGCCAAAAACCCACATTTTGTTGTTGATTTTGTCTTGTAATTGATCAAGTTATCATCATATATATAGAAATATATCACTT
CAAATATTCAAAGAGCTTTT

Downstream 100 bases:

>100_bases
GGAGCCCGCATATGTCTAAGATTCATTATCGTGAAGTGATCTGCCAAGGTGACTTGAATGTCGAAATCCTGGATGAGCAA
CGTGGTTTAAGCTTAACGCA

Product: curved DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MAQNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKTEYDQMLDHPQGFSGFGQG
TPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAGFGGSNQQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTL
NAYGEPEVQRKTLQVKIPKGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKN
IEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTPGNLYLVLNIVLPEAQTEQQQQAYETLAQAFASFKPRG

Sequences:

>Translated_313_residues
MAQNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKTEYDQMLDHPQGFSGFGQG
TPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAGFGGSNQQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTL
NAYGEPEVQRKTLQVKIPKGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKN
IEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTPGNLYLVLNIVLPEAQTEQQQQAYETLAQAFASFKPRG
>Mature_312_residues
AQNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKTEYDQMLDHPQGFSGFGQGT
PGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAGFGGSNQQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLN
AYGEPEVQRKTLQVKIPKGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKNI
EVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTPGNLYLVLNIVLPEAQTEQQQQAYETLAQAFASFKPRG

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI201862587, Length=341, Percent_Identity=31.0850439882698, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI56549115, Length=341, Percent_Identity=31.0850439882698, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI201862518, Length=341, Percent_Identity=31.0850439882698, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI5453690, Length=338, Percent_Identity=28.4023668639053, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI6631085, Length=333, Percent_Identity=30.3303303303303, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI39204547, Length=331, Percent_Identity=27.4924471299094, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI7706495, Length=346, Percent_Identity=26.0115606936416, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI205360840, Length=352, Percent_Identity=22.7272727272727, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI205360838, Length=352, Percent_Identity=22.7272727272727, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI194306642, Length=119, Percent_Identity=42.0168067226891, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI194306640, Length=119, Percent_Identity=42.0168067226891, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI9558755, Length=119, Percent_Identity=42.0168067226891, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI194328758, Length=376, Percent_Identity=25.531914893617, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI194328760, Length=376, Percent_Identity=25.531914893617, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI72534740, Length=137, Percent_Identity=37.2262773722628, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI22749377, Length=75, Percent_Identity=46.6666666666667, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI23503241, Length=117, Percent_Identity=38.4615384615385, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI56687498, Length=61, Percent_Identity=52.4590163934426, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI4504511, Length=285, Percent_Identity=27.3684210526316, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI4885495, Length=65, Percent_Identity=49.2307692307692, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1787235, Length=314, Percent_Identity=38.5350318471338, Blast_Score=194, Evalue=8e-51,
Organism=Escherichia coli, GI1786197, Length=367, Percent_Identity=30.7901907356948, Blast_Score=139, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17534355, Length=337, Percent_Identity=31.1572700296736, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI212645553, Length=353, Percent_Identity=24.3626062322946, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17553096, Length=63, Percent_Identity=47.6190476190476, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17553098, Length=63, Percent_Identity=47.6190476190476, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17538236, Length=131, Percent_Identity=32.824427480916, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323813, Length=146, Percent_Identity=37.6712328767123, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324265, Length=152, Percent_Identity=36.1842105263158, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6323119, Length=177, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323870, Length=67, Percent_Identity=49.2537313432836, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320888, Length=109, Percent_Identity=36.697247706422, Blast_Score=63, Evalue=6e-11,
Organism=Drosophila melanogaster, GI85726398, Length=352, Percent_Identity=26.4204545454545, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI19920464, Length=330, Percent_Identity=25.4545454545455, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24658562, Length=341, Percent_Identity=26.9794721407625, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24658555, Length=341, Percent_Identity=26.9794721407625, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI18858081, Length=353, Percent_Identity=25.7790368271955, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI18859921, Length=73, Percent_Identity=45.2054794520548, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI20129487, Length=97, Percent_Identity=42.2680412371134, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584014, Length=97, Percent_Identity=42.2680412371134, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45549272, Length=66, Percent_Identity=48.4848484848485, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552813, Length=66, Percent_Identity=48.4848484848485, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45552811, Length=66, Percent_Identity=48.4848484848485, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24646562, Length=62, Percent_Identity=53.2258064516129, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24646560, Length=62, Percent_Identity=53.2258064516129, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24646558, Length=62, Percent_Identity=53.2258064516129, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24646556, Length=62, Percent_Identity=53.2258064516129, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21357547, Length=62, Percent_Identity=53.2258064516129, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 34778; Mature: 34647

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEK
CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHH
KTEYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAGFGGSNQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCH
QYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQRKTLQVKIPKG
HHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEEECCCC
MKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKN
CCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEEEECCHHHHHCCC
IEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTPGNLYLVLNIVLPEAQTEQQQQAYE
EEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHH
TLAQAFASFKPRG
HHHHHHHHCCCCC
>Mature Secondary Structure 
AQNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEK
CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHH
KTEYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAGFGGSNQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCH
QYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQRKTLQVKIPKG
HHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEEECCCC
MKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKN
CCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEEEECCHHHHHCCC
IEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTPGNLYLVLNIVLPEAQTEQQQQAYE
EEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHH
TLAQAFASFKPRG
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA