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The map label for this gene is yfeW [H]

Identifier: 50083656

GI number: 50083656

Start: 400224

End: 401552

Strand: Reverse

Name: yfeW [H]

Synonym: ACIAD0400

Alternate gene names: 50083656

Gene position: 401552-400224 (Counterclockwise)

Preceding gene: 50083661

Following gene: 50083652

Centisome position: 11.16

GC content: 43.79

Gene sequence:

>1329_bases
ATGATAAAAACAACGAACAATGAGGATGTTGTGAAACTATTTTCGACCAACACTTGTGAAATTCCAAGTGACTTAACCTC
GGTAATACGTGCCCAGGATGAGAACCCAGCAGAACTTGGCGGTATGCAGCACGAACAGATTCAAAAAATCTGGAACAGTG
TAGAAAAATTGTATCGCACAGGAAATCATCCACTGATTAGCTTTTGTCTGCGCCGTCAGGGCCATATCCTGATTAATCGG
AGTATTGGTCATGCGCGTGGTAACTCTGTCCATGGTTTGGCAAACGATGCAGTCATTGCAACCCCAGATACTCCGATCTG
TTTATTTTCTGCTTCCAAAATCGTGACTGCCATGCTGGTTCATTTACTCAATGAAAAAGGCATGATTAATCTACTTGATC
CTGTCAGTTATTACATTCCAGAATACGGCGTGAATGGCAAACGTCGTGCCACTATTTTTCATCTTCTTTCACATCGTGGT
GGCATCCCACGTCTTGAAGATGATGTCACACCAGAATTACTGTTTGATAAACAAGCTATTTTGCAACGGCTTTATCAAGC
TAAACCTGTGTCTGCTGCAGGCACTCATTTGGCTTACCATGCCGTTACTGCAGGCTATATTTTAGGAGAGCTGGTTGAAC
GAGTCACAGGGCAAGATCTAAAAACTGTTCTACATGACGCCATTGAAAAACCCATGGGAATGTCTTACTTCAATTATGGT
CTTGAGCCACAATATCAAGAACAGGTTGCGCTTAATGTGGCGACAGGTCTGCACCCGCGTCTGGGTACAGATCATTATCT
CAATCATGTCCTTGGCGGTGGCTTAAAGCTCGCTGTAGATGTCACCAATGATCCACGCTTTATGCAGACTATTTGTCCTG
CTGGCAATATTTATACCAGTGCAGAACAGGCTGGGCGTTTTTTTGAAATGTTATTAAATGGCGGCGTTTATAAAAATAAA
CGGATTTTAACTTCAAAAACCGTGTTTCGCGCTACTTTGCCTACTTCTGTCACCAGCCTAGATCGAACGTTACTGGTACC
TATGCGTTATGCGCTAGGACCAATGCTCGGCAGTAATCCAGTGGGATTGTTTGGCCCCATGACAGGACAAGCGTTTGGAC
ATTTGGGATTTTCGAATATTTTATGCTGGGCCGATCCCGAACGTGATATCAGTGTATCCCTACTTACTACTGGAAAATCC
GTCGTCGGTACACATCTGACTGCACTGGCAAAAGTGTTGTACCAAATTGCAACCCAATGCCCAAAAGTTGAAAAGAATCA
GCGTCGCTCACTTTTTGGTAGTGATGCATCAGAAACGGACATGGTATAA

Upstream 100 bases:

>100_bases
AAATCAGTCATCGCTCCCTCCTGATTTGACTGGTATAACTCTCTTATAAAACTGGTCATTCAAGACACTGACTTTCATCC
GCATCGGTGGCACGCTCTGC

Downstream 100 bases:

>100_bases
AAAATAAAAGCCCAAGTCAGACTTGGGCTTTATGCGCTGTAGTTTCTTATTTTGAGCATTATTCTTATACTTTTCTATTA
TATTGAGAGTTTTCTTAGAA

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MIKTTNNEDVVKLFSTNTCEIPSDLTSVIRAQDENPAELGGMQHEQIQKIWNSVEKLYRTGNHPLISFCLRRQGHILINR
SIGHARGNSVHGLANDAVIATPDTPICLFSASKIVTAMLVHLLNEKGMINLLDPVSYYIPEYGVNGKRRATIFHLLSHRG
GIPRLEDDVTPELLFDKQAILQRLYQAKPVSAAGTHLAYHAVTAGYILGELVERVTGQDLKTVLHDAIEKPMGMSYFNYG
LEPQYQEQVALNVATGLHPRLGTDHYLNHVLGGGLKLAVDVTNDPRFMQTICPAGNIYTSAEQAGRFFEMLLNGGVYKNK
RILTSKTVFRATLPTSVTSLDRTLLVPMRYALGPMLGSNPVGLFGPMTGQAFGHLGFSNILCWADPERDISVSLLTTGKS
VVGTHLTALAKVLYQIATQCPKVEKNQRRSLFGSDASETDMV

Sequences:

>Translated_442_residues
MIKTTNNEDVVKLFSTNTCEIPSDLTSVIRAQDENPAELGGMQHEQIQKIWNSVEKLYRTGNHPLISFCLRRQGHILINR
SIGHARGNSVHGLANDAVIATPDTPICLFSASKIVTAMLVHLLNEKGMINLLDPVSYYIPEYGVNGKRRATIFHLLSHRG
GIPRLEDDVTPELLFDKQAILQRLYQAKPVSAAGTHLAYHAVTAGYILGELVERVTGQDLKTVLHDAIEKPMGMSYFNYG
LEPQYQEQVALNVATGLHPRLGTDHYLNHVLGGGLKLAVDVTNDPRFMQTICPAGNIYTSAEQAGRFFEMLLNGGVYKNK
RILTSKTVFRATLPTSVTSLDRTLLVPMRYALGPMLGSNPVGLFGPMTGQAFGHLGFSNILCWADPERDISVSLLTTGKS
VVGTHLTALAKVLYQIATQCPKVEKNQRRSLFGSDASETDMV
>Mature_442_residues
MIKTTNNEDVVKLFSTNTCEIPSDLTSVIRAQDENPAELGGMQHEQIQKIWNSVEKLYRTGNHPLISFCLRRQGHILINR
SIGHARGNSVHGLANDAVIATPDTPICLFSASKIVTAMLVHLLNEKGMINLLDPVSYYIPEYGVNGKRRATIFHLLSHRG
GIPRLEDDVTPELLFDKQAILQRLYQAKPVSAAGTHLAYHAVTAGYILGELVERVTGQDLKTVLHDAIEKPMGMSYFNYG
LEPQYQEQVALNVATGLHPRLGTDHYLNHVLGGGLKLAVDVTNDPRFMQTICPAGNIYTSAEQAGRFFEMLLNGGVYKNK
RILTSKTVFRATLPTSVTSLDRTLLVPMRYALGPMLGSNPVGLFGPMTGQAFGHLGFSNILCWADPERDISVSLLTTGKS
VVGTHLTALAKVLYQIATQCPKVEKNQRRSLFGSDASETDMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0214 family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=385, Percent_Identity=23.3766233766234, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17538474, Length=380, Percent_Identity=23.6842105263158, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71983659, Length=393, Percent_Identity=24.4274809160305, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17538001, Length=354, Percent_Identity=25.9887005649718, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71983666, Length=153, Percent_Identity=32.0261437908497, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17535191, Length=290, Percent_Identity=24.8275862068966, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17535177, Length=115, Percent_Identity=33.9130434782609, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR022849 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 48594; Mature: 48594

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTTNNEDVVKLFSTNTCEIPSDLTSVIRAQDENPAELGGMQHEQIQKIWNSVEKLYRT
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHC
GNHPLISFCLRRQGHILINRSIGHARGNSVHGLANDAVIATPDTPICLFSASKIVTAMLV
CCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHH
HLLNEKGMINLLDPVSYYIPEYGVNGKRRATIFHLLSHRGGIPRLEDDVTPELLFDKQAI
HHHCCCCCEEHHCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCHHHH
LQRLYQAKPVSAAGTHLAYHAVTAGYILGELVERVTGQDLKTVLHDAIEKPMGMSYFNYG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCC
LEPQYQEQVALNVATGLHPRLGTDHYLNHVLGGGLKLAVDVTNDPRFMQTICPAGNIYTS
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCCCCC
AEQAGRFFEMLLNGGVYKNKRILTSKTVFRATLPTSVTSLDRTLLVPMRYALGPMLGSNP
HHHHHHHHHHHHCCCCCCCCEEEEHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC
VGLFGPMTGQAFGHLGFSNILCWADPERDISVSLLTTGKSVVGTHLTALAKVLYQIATQC
CCCCCCCCCHHHHCCCHHCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHC
PKVEKNQRRSLFGSDASETDMV
CCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIKTTNNEDVVKLFSTNTCEIPSDLTSVIRAQDENPAELGGMQHEQIQKIWNSVEKLYRT
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHC
GNHPLISFCLRRQGHILINRSIGHARGNSVHGLANDAVIATPDTPICLFSASKIVTAMLV
CCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHH
HLLNEKGMINLLDPVSYYIPEYGVNGKRRATIFHLLSHRGGIPRLEDDVTPELLFDKQAI
HHHCCCCCEEHHCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCHHHH
LQRLYQAKPVSAAGTHLAYHAVTAGYILGELVERVTGQDLKTVLHDAIEKPMGMSYFNYG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCC
LEPQYQEQVALNVATGLHPRLGTDHYLNHVLGGGLKLAVDVTNDPRFMQTICPAGNIYTS
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCCCCC
AEQAGRFFEMLLNGGVYKNKRILTSKTVFRATLPTSVTSLDRTLLVPMRYALGPMLGSNP
HHHHHHHHHHHHCCCCCCCCEEEEHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC
VGLFGPMTGQAFGHLGFSNILCWADPERDISVSLLTTGKSVVGTHLTALAKVLYQIATQC
CCCCCCCCCHHHHCCCHHCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHC
PKVEKNQRRSLFGSDASETDMV
CCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA