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The map label for this gene is tadA [H]

Identifier: 50083486

GI number: 50083486

Start: 199469

End: 200023

Strand: Direct

Name: tadA [H]

Synonym: ACIAD0204

Alternate gene names: 50083486

Gene position: 199469-200023 (Clockwise)

Preceding gene: 50083485

Following gene: 50083487

Centisome position: 5.54

GC content: 47.21

Gene sequence:

>555_bases
TTGCTTCGTGTCTGGGATGGTCATCAACGATCAAGCTGCCAAGCAAAAAAGAGGTATTTCATGTCTGTCGATATGCATCC
TAGTGAACAGGATCTTTATTTTTTGCGTAAAACATTTGCGCTTGCCGAACAGACCAAAGCGCAAGGACTGCATCCTTTTG
CAGCAATTGTGGTGGATGCAGATGGCAATATTGTTACAGAGGCAGGTAATAACTCACTTCCTCCTACAGGTGACCCCACT
CGTCATGCCGAAACTGTTGCAGCAGGTCAGGCGGCACGTTTAAAAAGCCTGAAAGAGCTCAGAACATGCACGCTGTATAC
CAATGCAGAACCTTGTGCGATGTGTGCAGGTGCAATTTACTGGACGGGTATTGGGCGTGTGGTGTACGGCATGAGTGAAA
AAAAACTTCTAAGTATTACTGGCGATCATCCTGAAAATCCAACGCTCTCATTGCCATGTCGTACTGTGTTTGCAAGTGGT
CAGCGCGGTATTGAAGTCATAGGGCCTTGTCTGAGTGAAGAAGCGGCTGTCGCACATCAAGGTTTCTGGCAATAG

Upstream 100 bases:

>100_bases
TTTAGCTTTGAGCTACAACTTCTAAATTTGTCATTCAGACCACGGATTCAAATATCAGATGTAAGTCCATTCTGTTGAAG
GCATGAAGTAAACAACCATT

Downstream 100 bases:

>100_bases
CGTATCTATTTTATCGAGTTTCCTATTAAAAAGAGGGAGAGATGATGACGACAAATACTGAATATGCACCATATCGCTTA
GAGTTGGTCAATATCACTAA

Product: cytidine and deoxycytidylate deaminase zinc-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLRVWDGHQRSSCQAKKRYFMSVDMHPSEQDLYFLRKTFALAEQTKAQGLHPFAAIVVDADGNIVTEAGNNSLPPTGDPT
RHAETVAAGQAARLKSLKELRTCTLYTNAEPCAMCAGAIYWTGIGRVVYGMSEKKLLSITGDHPENPTLSLPCRTVFASG
QRGIEVIGPCLSEEAAVAHQGFWQ

Sequences:

>Translated_184_residues
MLRVWDGHQRSSCQAKKRYFMSVDMHPSEQDLYFLRKTFALAEQTKAQGLHPFAAIVVDADGNIVTEAGNNSLPPTGDPT
RHAETVAAGQAARLKSLKELRTCTLYTNAEPCAMCAGAIYWTGIGRVVYGMSEKKLLSITGDHPENPTLSLPCRTVFASG
QRGIEVIGPCLSEEAAVAHQGFWQ
>Mature_184_residues
MLRVWDGHQRSSCQAKKRYFMSVDMHPSEQDLYFLRKTFALAEQTKAQGLHPFAAIVVDADGNIVTEAGNNSLPPTGDPT
RHAETVAAGQAARLKSLKELRTCTLYTNAEPCAMCAGAIYWTGIGRVVYGMSEKKLLSITGDHPENPTLSLPCRTVFASG
QRGIEVIGPCLSEEAAVAHQGFWQ

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=105, Percent_Identity=36.1904761904762, Blast_Score=63, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17541138, Length=106, Percent_Identity=37.7358490566038, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17554608, Length=102, Percent_Identity=35.2941176470588, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555996, Length=91, Percent_Identity=36.2637362637363, Blast_Score=63, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 20082; Mature: 20082

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVWDGHQRSSCQAKKRYFMSVDMHPSEQDLYFLRKTFALAEQTKAQGLHPFAAIVVDA
CCEECCCCCCCHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
DGNIVTEAGNNSLPPTGDPTRHAETVAAGQAARLKSLKELRTCTLYTNAEPCAMCAGAIY
CCCEEEECCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHH
WTGIGRVVYGMSEKKLLSITGDHPENPTLSLPCRTVFASGQRGIEVIGPCLSEEAAVAHQ
HHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHEECCCCCCHHHCCCCCCHHHHHHHC
GFWQ
CCCC
>Mature Secondary Structure
MLRVWDGHQRSSCQAKKRYFMSVDMHPSEQDLYFLRKTFALAEQTKAQGLHPFAAIVVDA
CCEECCCCCCCHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
DGNIVTEAGNNSLPPTGDPTRHAETVAAGQAARLKSLKELRTCTLYTNAEPCAMCAGAIY
CCCEEEECCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHH
WTGIGRVVYGMSEKKLLSITGDHPENPTLSLPCRTVFASGQRGIEVIGPCLSEEAAVAHQ
HHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHEECCCCCCHHHCCCCCCHHHHHHHC
GFWQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]