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The map label for this gene is med [H]

Identifier: 50083480

GI number: 50083480

Start: 193384

End: 194565

Strand: Direct

Name: med [H]

Synonym: ACIAD0198

Alternate gene names: 50083480

Gene position: 193384-194565 (Clockwise)

Preceding gene: 50083479

Following gene: 50083481

Centisome position: 5.37

GC content: 43.74

Gene sequence:

>1182_bases
ATGTTTGCTTCAAAAAATAACCATTACAAGATCAACGATCTACAAGCTGAAAAAAGCTTCTTAGCAAAGCTTTTTTCTAA
GATTAAACATCAGGCCATGAGTACGGCGACACATGGGCTTTTAGCTGCGACGGCGTTGTCTGTAGCAAGTGTTGGGATTA
CCAGTTATGCCGTAGCAGCCGAGCCTTTAAAGGCCGCTTTTGTCTATATTGGACCACCTGGTGATCATGGTTGGACTTAT
GCGCATGATCAAGCACGAATTCGAACTGAAAAAGATCTTAAAGGTCTGGTTAAAACCTCTTTTGTCGCCAATGTACCTGA
AACTGGCGATGCGGAACGCGTATTTCGCAATTTGGCACAACAAGGCAATCAGGTAATTTTTGGTACGTCTTTTGGTTATA
TGAATGCCATGGAAAAAGTCGCAAAGACTTATCCAAATACGGTATTTATGCATGCGACGGGCTATAAATCTTCAAAAAAT
ATGGGGAATTATAATATTCGCACCTATCAAGGGGCATATTTACTGGGTGTATTGGCAGGTAAACAAAGTAAAACAGGCAA
AATTGGGGTAGTTGGCTCTTATCCAATTCCTGAGGTGGTACGTAACATCAATGCATTTACACTAGGCGCACGCAGTGTTA
ATCCTAAAATTACCACCCAGGTCGTTTGGGTCAGTTCTTGGTTTGACCCAGGTAAGGAGCGTGATGCTGCACTGGCTTTG
ATCTCTCAGGGCTGTGATGTGTTAATGCAAAATACCGATTCACCTGCTGTAGTGCAGGCAGCCAAACAAAAAGGCGTTTA
TGCATTTGGCTGGAATTCCGATATGAGTAAATTTGGTGGTAATGCGCAGTTGGCAGCCGCAGTACTGCACTGGGATACCA
TCTATGACAAAGTGATCCGTGATGTCGCAGCCAAGAAATGGACGAATGCACCGATCTATTACGGCGTTAAAGAGGGTGCG
GTAAATGTTGAAAATATTGGTTCTGCTGTATCTGCAGATGCCAAGAAATTGGTACTTGAGCGTCGTGATGCGATGAAATC
GGGCAAGCTCAATCCATTTGCAGGACCACTTTATAATCAAGCTGGTCAGCAGTTTGTGAAGGCAGGGGCGGTATATACCG
AAGCACAACTCGACAAAATGAACTTCTATGTACAAGGCGTACAAGGTGCTTTACCGAAGTAA

Upstream 100 bases:

>100_bases
TTGGCTTGAAGGTTGCATTTTGAACTATAGACGTGAGGAGTGGCATATATCAGTCGTGTCCAGCCGCATATTTCAATCAT
AACGAATTTGGGTAGGTTCT

Downstream 100 bases:

>100_bases
ATGAAGCGAGCATATGATTTGGAGTGAATTGCCATGATACAGCAGTGGATTCCCATTTTACCTTCGGTTCTGCTTGAACC
AAAAGAGGTGATTCAGGCCT

Product: surface lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MFASKNNHYKINDLQAEKSFLAKLFSKIKHQAMSTATHGLLAATALSVASVGITSYAVAAEPLKAAFVYIGPPGDHGWTY
AHDQARIRTEKDLKGLVKTSFVANVPETGDAERVFRNLAQQGNQVIFGTSFGYMNAMEKVAKTYPNTVFMHATGYKSSKN
MGNYNIRTYQGAYLLGVLAGKQSKTGKIGVVGSYPIPEVVRNINAFTLGARSVNPKITTQVVWVSSWFDPGKERDAALAL
ISQGCDVLMQNTDSPAVVQAAKQKGVYAFGWNSDMSKFGGNAQLAAAVLHWDTIYDKVIRDVAAKKWTNAPIYYGVKEGA
VNVENIGSAVSADAKKLVLERRDAMKSGKLNPFAGPLYNQAGQQFVKAGAVYTEAQLDKMNFYVQGVQGALPK

Sequences:

>Translated_393_residues
MFASKNNHYKINDLQAEKSFLAKLFSKIKHQAMSTATHGLLAATALSVASVGITSYAVAAEPLKAAFVYIGPPGDHGWTY
AHDQARIRTEKDLKGLVKTSFVANVPETGDAERVFRNLAQQGNQVIFGTSFGYMNAMEKVAKTYPNTVFMHATGYKSSKN
MGNYNIRTYQGAYLLGVLAGKQSKTGKIGVVGSYPIPEVVRNINAFTLGARSVNPKITTQVVWVSSWFDPGKERDAALAL
ISQGCDVLMQNTDSPAVVQAAKQKGVYAFGWNSDMSKFGGNAQLAAAVLHWDTIYDKVIRDVAAKKWTNAPIYYGVKEGA
VNVENIGSAVSADAKKLVLERRDAMKSGKLNPFAGPLYNQAGQQFVKAGAVYTEAQLDKMNFYVQGVQGALPK
>Mature_393_residues
MFASKNNHYKINDLQAEKSFLAKLFSKIKHQAMSTATHGLLAATALSVASVGITSYAVAAEPLKAAFVYIGPPGDHGWTY
AHDQARIRTEKDLKGLVKTSFVANVPETGDAERVFRNLAQQGNQVIFGTSFGYMNAMEKVAKTYPNTVFMHATGYKSSKN
MGNYNIRTYQGAYLLGVLAGKQSKTGKIGVVGSYPIPEVVRNINAFTLGARSVNPKITTQVVWVSSWFDPGKERDAALAL
ISQGCDVLMQNTDSPAVVQAAKQKGVYAFGWNSDMSKFGGNAQLAAAVLHWDTIYDKVIRDVAAKKWTNAPIYYGVKEGA
VNVENIGSAVSADAKKLVLERRDAMKSGKLNPFAGPLYNQAGQQFVKAGAVYTEAQLDKMNFYVQGVQGALPK

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 42587; Mature: 42587

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFASKNNHYKINDLQAEKSFLAKLFSKIKHQAMSTATHGLLAATALSVASVGITSYAVAA
CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
EPLKAAFVYIGPPGDHGWTYAHDQARIRTEKDLKGLVKTSFVANVPETGDAERVFRNLAQ
CCCEEEEEEEECCCCCCCCEECCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
QGNQVIFGTSFGYMNAMEKVAKTYPNTVFMHATGYKSSKNMGNYNIRTYQGAYLLGVLAG
CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCEEEEEEEEC
KQSKTGKIGVVGSYPIPEVVRNINAFTLGARSVNPKITTQVVWVSSWFDPGKERDAALAL
CCCCCCCEEEEECCCHHHHHHCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCHHHHHHH
ISQGCDVLMQNTDSPAVVQAAKQKGVYAFGWNSDMSKFGGNAQLAAAVLHWDTIYDKVIR
HHHCCCEEEECCCCHHHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
DVAAKKWTNAPIYYGVKEGAVNVENIGSAVSADAKKLVLERRDAMKSGKLNPFAGPLYNQ
HHHHHHCCCCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
AGQQFVKAGAVYTEAQLDKMNFYVQGVQGALPK
HHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCC
>Mature Secondary Structure
MFASKNNHYKINDLQAEKSFLAKLFSKIKHQAMSTATHGLLAATALSVASVGITSYAVAA
CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
EPLKAAFVYIGPPGDHGWTYAHDQARIRTEKDLKGLVKTSFVANVPETGDAERVFRNLAQ
CCCEEEEEEEECCCCCCCCEECCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
QGNQVIFGTSFGYMNAMEKVAKTYPNTVFMHATGYKSSKNMGNYNIRTYQGAYLLGVLAG
CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCEEEEEEEEC
KQSKTGKIGVVGSYPIPEVVRNINAFTLGARSVNPKITTQVVWVSSWFDPGKERDAALAL
CCCCCCCEEEEECCCHHHHHHCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCHHHHHHH
ISQGCDVLMQNTDSPAVVQAAKQKGVYAFGWNSDMSKFGGNAQLAAAVLHWDTIYDKVIR
HHHCCCEEEECCCCHHHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
DVAAKKWTNAPIYYGVKEGAVNVENIGSAVSADAKKLVLERRDAMKSGKLNPFAGPLYNQ
HHHHHHCCCCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
AGQQFVKAGAVYTEAQLDKMNFYVQGVQGALPK
HHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]