Click here to switch to the map view.

The map label for this gene is ssuA [H]

Identifier: 50083332

GI number: 50083332

Start: 43039

End: 44061

Strand: Reverse

Name: ssuA [H]

Synonym: ACIAD0038

Alternate gene names: 50083332

Gene position: 44061-43039 (Counterclockwise)

Preceding gene: 50083333

Following gene: 50083331

Centisome position: 1.22

GC content: 42.33

Gene sequence:

>1023_bases
ATGGTGTGGCCTCATCTTTATTTTTCTGAGTTAGAGGCACAGCACATCATGACCAGTATCATTTCATCTTCATGGTTCAA
ATTTTCAGTGGTTGCAGCAAGTATCACTGGCATCATGATGCTGAGTGGCTGTGCCAAAAAAGAAGCACAGGATTTGACCA
CCTTAAATATTGGCTTTCAGAAATATGGTTTATTACCGATTGTGAAAGAGCGTGGTGAATTAGACAAAATCTTAAAAAAA
GAAGGAATTACGATCAAGTGGGTTGAATTCCCCGCTGGCCCACAGCTACTTGAGGGTTTAAATGTAGGCAGTGTTGTCTT
TGGCGAGGCAGGTGAAGCACCACCCATTTTTGCACAGGCAGCCAACTCTAATCTGGTTTATGTTGCTAATCAGCCAGCTG
CACCCAATGCAGAAGCACTGATTGTACAAAAAAATTCATCCGTTCATAGTGTTCAAGACTTAAAAGGCAAACGTATTGCC
TTAAATAAAGGCTCCAATGTTCATTATCTATTGCTCAAACTATTAGAAAAAAATCATTTAACGCTGAACGATATTCAGGT
GGTGTATTTACCGCCTGCCGATGCCCGTGCTGCTTTTGAAAAAGGTGCAGTGGATGCATGGGTGATTTGGGATCCGTTCT
TTGCTGCTGCCGAGCAACAGATTGGCGCTCGTGTGATTGCGACTGGACAAGATCTTGTGAGCAATCATCAGTTCTATTTG
GCAGATCGTAAATTTGCCCAGAATCATCCAGAGGTTCTAAAAACGCTGGTCAAAGAACTGAATCAAAGCACTGAATGGGT
CAAAACTCATCAGGATGACGCAGCGAAACTTCTTGAAAAACCAACTGCACTCGATTTTAACATTCTAAAAACGTCGATAT
CCCGCATGGGCTTTGGGGTAACACCACTGTCAAATACCGTGATTAATGAGCAACAACAGGTTGCCGATGCCTTCTATCAA
CAAAAACTCATTCCTCAGCCGCTCAAAATTCAAGACGCCATTTTAAAGGGCGAGATTAAATAA

Upstream 100 bases:

>100_bases
ATACTCCAACAATTCAGATAAGCTTTGCAGTTTTTTGGTTATCTGATTTTTATATAAGTAATATTAAAAATTTTATTTTT
TATGGAATAGAAATAATTCT

Downstream 100 bases:

>100_bases
TAAGCAAATTATCTGGATTTATCATTATGAGTACATTTAAAACGATTGGTATTCTGGGAACGATCATTGTAACGGCAGGG
CTGAGTGCTTGTCAGAAAAC

Product: alkanesulfonate ABC transporter periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MVWPHLYFSELEAQHIMTSIISSSWFKFSVVAASITGIMMLSGCAKKEAQDLTTLNIGFQKYGLLPIVKERGELDKILKK
EGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLVYVANQPAAPNAEALIVQKNSSVHSVQDLKGKRIA
LNKGSNVHYLLLKLLEKNHLTLNDIQVVYLPPADARAAFEKGAVDAWVIWDPFFAAAEQQIGARVIATGQDLVSNHQFYL
ADRKFAQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILKTSISRMGFGVTPLSNTVINEQQQVADAFYQ
QKLIPQPLKIQDAILKGEIK

Sequences:

>Translated_340_residues
MVWPHLYFSELEAQHIMTSIISSSWFKFSVVAASITGIMMLSGCAKKEAQDLTTLNIGFQKYGLLPIVKERGELDKILKK
EGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLVYVANQPAAPNAEALIVQKNSSVHSVQDLKGKRIA
LNKGSNVHYLLLKLLEKNHLTLNDIQVVYLPPADARAAFEKGAVDAWVIWDPFFAAAEQQIGARVIATGQDLVSNHQFYL
ADRKFAQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILKTSISRMGFGVTPLSNTVINEQQQVADAFYQ
QKLIPQPLKIQDAILKGEIK
>Mature_340_residues
MVWPHLYFSELEAQHIMTSIISSSWFKFSVVAASITGIMMLSGCAKKEAQDLTTLNIGFQKYGLLPIVKERGELDKILKK
EGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLVYVANQPAAPNAEALIVQKNSSVHSVQDLKGKRIA
LNKGSNVHYLLLKLLEKNHLTLNDIQVVYLPPADARAAFEKGAVDAWVIWDPFFAAAEQQIGARVIATGQDLVSNHQFYL
ADRKFAQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILKTSISRMGFGVTPLSNTVINEQQQVADAFYQ
QKLIPQPLKIQDAILKGEIK

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=308, Percent_Identity=38.6363636363636, Blast_Score=225, Evalue=3e-60,
Organism=Escherichia coli, GI87081727, Length=184, Percent_Identity=29.3478260869565, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 37567; Mature: 37567

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWPHLYFSELEAQHIMTSIISSSWFKFSVVAASITGIMMLSGCAKKEAQDLTTLNIGFQ
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECHH
KYGLLPIVKERGELDKILKKEGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQA
HHCCCHHHHHCCHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCEEECCCCCCCCCEEEC
ANSNLVYVANQPAAPNAEALIVQKNSSVHSVQDLKGKRIALNKGSNVHYLLLKLLEKNHL
CCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC
TLNDIQVVYLPPADARAAFEKGAVDAWVIWDPFFAAAEQQIGARVIATGQDLVSNHQFYL
EEECEEEEEECCCCHHHHHHCCCCEEEEEECHHHHHHHHHCCCEEEECCHHHHCCCEEEE
ADRKFAQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILKTSISRMGFGV
ECCHHHCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
TPLSNTVINEQQQVADAFYQQKLIPQPLKIQDAILKGEIK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MVWPHLYFSELEAQHIMTSIISSSWFKFSVVAASITGIMMLSGCAKKEAQDLTTLNIGFQ
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECHH
KYGLLPIVKERGELDKILKKEGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQA
HHCCCHHHHHCCHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCEEECCCCCCCCCEEEC
ANSNLVYVANQPAAPNAEALIVQKNSSVHSVQDLKGKRIALNKGSNVHYLLLKLLEKNHL
CCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC
TLNDIQVVYLPPADARAAFEKGAVDAWVIWDPFFAAAEQQIGARVIATGQDLVSNHQFYL
EEECEEEEEECCCCHHHHHHCCCCEEEEEECHHHHHHHHHCCCEEEECCHHHHCCCEEEE
ADRKFAQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILKTSISRMGFGV
ECCHHHCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
TPLSNTVINEQQQVADAFYQQKLIPQPLKIQDAILKGEIK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]