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The map label for this gene is ssuC [H]

Identifier: 50083329

GI number: 50083329

Start: 39995

End: 40795

Strand: Reverse

Name: ssuC [H]

Synonym: ACIAD0035

Alternate gene names: 50083329

Gene position: 40795-39995 (Counterclockwise)

Preceding gene: 50083330

Following gene: 50083328

Centisome position: 1.13

GC content: 46.44

Gene sequence:

>801_bases
ATGAATTATTCTAAAAAACTGAATGTTTCACGTGGAACACAAGCCCTTGGACAGCGTCTGCTGCCTTGGGTTGTTCCCGT
GATCCTGATTGCCATTTGGCAACTTGCATCAACGACAGGTCTATTACAAAGTCGAATTTTACCTGCACCTAGCGCCGTGG
TCAGCGCCTTCTGGCATCTTTTAGTCAGTGGTGAACTTTGGCATCACGTTAAGGTCAGTGCTGGACGTGCTTTACTTGGT
TTGCTGTTGGGAGGTGGTCTCGGTTTGTTGTTAGGACTACTCAATGGTTCATCCAGAATTGCATCGACCTTACTCGATAC
CACCTTACAAATGATTCGCAATATTCCTGCACTTGCCCTCATTCCTTTGGTGATTTTATGGTTTGGTATTGATGAGTCTG
CCAAACTGTTTCTGGTGGCTGTGGGTGTTTTTTTCCCCATGTATATCAATACCTACCATGGTATTCGTTCAGTCGACCCT
CAACTGATTGAGATGGGTAAAAGCTATGGTCTGACCCGCTGGCAACTGTATAAAGAAATCATTCTGCCTGGGGCTATGCC
GTCTATCTTAGTGGGTCTACGTTTCTCATTGGGCTTGGTCTGGGTACTTTTAATTGTGGCAGAAACCATTTCCGCTCAGG
CAGGTATTGGCTACATGACCATGAATGCGCGCGAATTTTTACAGACTGACGTGGTACTGGTCGGAATTCTACTTTATGCC
CTACTCGGTAAATTGGCAGACGTACTGGCACAGGCGCTCGAACGCTACTTACTGCGCTGGCATGCAGGCTATCAACAATA
A

Upstream 100 bases:

>100_bases
ATCTGACTGGGCCGTTCGGTGAGATTATTGCCAACAACTATGTACCTGATGAAGATAAGAAAAAGAAACTCTCCAAAGAT
CAAAATCCGAAGGAGACTGC

Downstream 100 bases:

>100_bases
CAGGTGACGATCATGAGTAATTTAAATATTCCATTGTTTCCAGATCAGGAGAAAGATCTATCATCTTCAGCATCACAGCC
TGAAACAGCACCCATTGGCG

Product: alkanesulfonate ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MNYSKKLNVSRGTQALGQRLLPWVVPVILIAIWQLASTTGLLQSRILPAPSAVVSAFWHLLVSGELWHHVKVSAGRALLG
LLLGGGLGLLLGLLNGSSRIASTLLDTTLQMIRNIPALALIPLVILWFGIDESAKLFLVAVGVFFPMYINTYHGIRSVDP
QLIEMGKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYA
LLGKLADVLAQALERYLLRWHAGYQQ

Sequences:

>Translated_266_residues
MNYSKKLNVSRGTQALGQRLLPWVVPVILIAIWQLASTTGLLQSRILPAPSAVVSAFWHLLVSGELWHHVKVSAGRALLG
LLLGGGLGLLLGLLNGSSRIASTLLDTTLQMIRNIPALALIPLVILWFGIDESAKLFLVAVGVFFPMYINTYHGIRSVDP
QLIEMGKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYA
LLGKLADVLAQALERYLLRWHAGYQQ
>Mature_266_residues
MNYSKKLNVSRGTQALGQRLLPWVVPVILIAIWQLASTTGLLQSRILPAPSAVVSAFWHLLVSGELWHHVKVSAGRALLG
LLLGGGLGLLLGLLNGSSRIASTLLDTTLQMIRNIPALALIPLVILWFGIDESAKLFLVAVGVFFPMYINTYHGIRSVDP
QLIEMGKSYGLTRWQLYKEIILPGAMPSILVGLRFSLGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYA
LLGKLADVLAQALERYLLRWHAGYQQ

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=247, Percent_Identity=64.7773279352227, Blast_Score=303, Evalue=7e-84,
Organism=Escherichia coli, GI1786564, Length=267, Percent_Identity=34.0823970037453, Blast_Score=144, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29150; Mature: 29150

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYSKKLNVSRGTQALGQRLLPWVVPVILIAIWQLASTTGLLQSRILPAPSAVVSAFWHL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LVSGELWHHVKVSAGRALLGLLLGGGLGLLLGLLNGSSRIASTLLDTTLQMIRNIPALAL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH
IPLVILWFGIDESAKLFLVAVGVFFPMYINTYHGIRSVDPQLIEMGKSYGLTRWQLYKEI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHH
ILPGAMPSILVGLRFSLGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHH
LLGKLADVLAQALERYLLRWHAGYQQ
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNYSKKLNVSRGTQALGQRLLPWVVPVILIAIWQLASTTGLLQSRILPAPSAVVSAFWHL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LVSGELWHHVKVSAGRALLGLLLGGGLGLLLGLLNGSSRIASTLLDTTLQMIRNIPALAL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH
IPLVILWFGIDESAKLFLVAVGVFFPMYINTYHGIRSVDPQLIEMGKSYGLTRWQLYKEI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHH
ILPGAMPSILVGLRFSLGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHH
LLGKLADVLAQALERYLLRWHAGYQQ
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]