| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is yheS [H]
Identifier: 50083304
GI number: 50083304
Start: 7336
End: 9270
Strand: Reverse
Name: yheS [H]
Synonym: ACIAD0007
Alternate gene names: 50083304
Gene position: 9270-7336 (Counterclockwise)
Preceding gene: 50083308
Following gene: 50083302
Centisome position: 0.26
GC content: 45.37
Gene sequence:
>1935_bases ATGATTCAACTCGACCAATTTTCAGTTCGCCGTGGCGGACGAGTCCTCTTTCAAAAAGCATCGATGCAATTGCATCCAGG CTGGAAAATTGGTTTAACTGGTGTCAATGGTGCTGGTAAATCGACCCTATTTTCTGCACTTCTGGGTGGAATTGAATCGG ATAGTGGTAGCTTGAGTCGTCCGAATGTCTGGACTGTGGCACACATGGCACAAGAAATTAAAGCGCTGAATATGAAAGCG ATTGATTTCGTCTTGTCTGGCGATGAAGAGTACTGGACCATTCAGCATCAGCTTGAACATCCAGAACAGCTTAGCGACAA CGAGTTGGCTCACCTTTATAGTCGTTTTGATGAAATTAACGGTTATGCAGCAGCGGCTAAAGCATCCCAGCTTATGGCAG GTTTAGGTTTTTTTGAATATCAATCGCAATATGATGTTGCCAGCTTCTCTGGCGGTTGGCGGATGCGGTTGAATCTGGCG CGTACCCTGATGAGTCGCTCAGATTTACTCTTACTCGACGAACCAACCAACCATTTGGACTTGGACGCGATTTTGTGGCT TGAAGACTGGTTGAAAGCCTATGAAGGAACACTGGTTCTGATTTCGCATGACCGTGATTTTCTTGATGCCATTACTGATC ATATTTTACATATCGAAAATCAGCAGTTAACACTTTATACAGGTAATTATTCAACCTTCGAAACCACACGTGCAGAACGT TTGGCGCAGCAACAGCAAGCGTTTGAAAAACAGCAAGAGACGCGCGCGCACTTACAAAAATATATTGATCGTTTTAAGGC ACAAGCCACTAAGGCTCGTCAAGCACAAAGCCGTATTAAACAATTAGAACGCATGCAAGAACTGGCACCTGCACATGTCG ATACGCCTTTCACCTTTAGCTTTCGTGAACCAAGCAAAATGAGCTCGCCGCTGTTGGCACTTGAACACGCCGACATTGGT TATGGCGACAAATTGATTGTGACCAATGTCAATTTGCAAATTACCCCGACCAGCCGGATTGGTCTGCTCGGAATGAACGG CGCGGGTAAATCGACACTGATTAAATCTCTGGTGGGTGATTTGGCGCTATTGCGTGGCACACGTTATGCCTCAGAGCTGC TCAATATCGGTTACTTTGCCCAGCATCAAATGGATGCTTTGGATGGATCAGCCAGTCCAATGCTACAACTGTCACGTATT GCAGATAAAAAAATCAGCGAAGCAACACTACGTGCTTTTCTGGGCAGCTTTGGTTTTAGCGGCGAACGCATGGATACGCC GAGCGAGAGTTTTTCGGGTGGCGAACGTGCTCGACTGGCACTGGCATTGATTGTCTGGCAACGTCCCAATGTTTTAATTT TAGATGAACCGACCAACCATCTAGATTTAGATATGCGTCATGCGCTAACCATGGCATTACAGGACTTTGAAGGTGCCGTG GTTTTGGTATCACATGAGCGTCAATTGATCGCCAGCGTCTGCGATGAGCTGATTCTGGTTCATAATGGCAGCAGTCGCGA TTTTGATGGTGATCTACATGATTATGCGAACTGGTTACGTCAGGCACGTAATGACATGATGAAGCAAGGACAACAGCCTA CCGCGCCTATTCAATCTAAAGTTGAAGCGCAACCTGTCATCTCTAAACTGGACAAAGAAGCCCAACGCAAAGAAGCCGCG AAACGTCGCGAACAAACGCGTCCGATTCGTAAAAATATTGAAAAATGTGAAAGTCAGGTTGAGCGCTTACAAAAACGTTT AGCGGAAATCGAAACCTTACTCGGTGATAGCTCACTTTACGATGCCGATCGTAAAAATGATTTGTTAAAACTCATGAATG AACAAAGCGATTCAAAACAGGAACTGGAGCAGGCGGAAGAACAAATGCTTGAATTGATGATGCAACTCGAAGAGCTCGAA AGTTTATTTGATTAA
Upstream 100 bases:
>100_bases ATCACTTATTCTCAGGCTGACTTGATACTTAAATTTTTGTCTTCGTGTTCGTATATCTTTAGAATAGCGCTACTGTTCTC TGCATAGCGTCAATTTCTCC
Downstream 100 bases:
>100_bases TTTACAATCCTGGGCTGTAATCTATTGCAGGATTTACAGCCCGAAACATTTAATTGCCCGCTGTTACAGCTTTATATTTT TTAATCACTTTTCAAAACCC
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MIQLDQFSVRRGGRVLFQKASMQLHPGWKIGLTGVNGAGKSTLFSALLGGIESDSGSLSRPNVWTVAHMAQEIKALNMKA IDFVLSGDEEYWTIQHQLEHPEQLSDNELAHLYSRFDEINGYAAAAKASQLMAGLGFFEYQSQYDVASFSGGWRMRLNLA RTLMSRSDLLLLDEPTNHLDLDAILWLEDWLKAYEGTLVLISHDRDFLDAITDHILHIENQQLTLYTGNYSTFETTRAER LAQQQQAFEKQQETRAHLQKYIDRFKAQATKARQAQSRIKQLERMQELAPAHVDTPFTFSFREPSKMSSPLLALEHADIG YGDKLIVTNVNLQITPTSRIGLLGMNGAGKSTLIKSLVGDLALLRGTRYASELLNIGYFAQHQMDALDGSASPMLQLSRI ADKKISEATLRAFLGSFGFSGERMDTPSESFSGGERARLALALIVWQRPNVLILDEPTNHLDLDMRHALTMALQDFEGAV VLVSHERQLIASVCDELILVHNGSSRDFDGDLHDYANWLRQARNDMMKQGQQPTAPIQSKVEAQPVISKLDKEAQRKEAA KRREQTRPIRKNIEKCESQVERLQKRLAEIETLLGDSSLYDADRKNDLLKLMNEQSDSKQELEQAEEQMLELMMQLEELE SLFD
Sequences:
>Translated_644_residues MIQLDQFSVRRGGRVLFQKASMQLHPGWKIGLTGVNGAGKSTLFSALLGGIESDSGSLSRPNVWTVAHMAQEIKALNMKA IDFVLSGDEEYWTIQHQLEHPEQLSDNELAHLYSRFDEINGYAAAAKASQLMAGLGFFEYQSQYDVASFSGGWRMRLNLA RTLMSRSDLLLLDEPTNHLDLDAILWLEDWLKAYEGTLVLISHDRDFLDAITDHILHIENQQLTLYTGNYSTFETTRAER LAQQQQAFEKQQETRAHLQKYIDRFKAQATKARQAQSRIKQLERMQELAPAHVDTPFTFSFREPSKMSSPLLALEHADIG YGDKLIVTNVNLQITPTSRIGLLGMNGAGKSTLIKSLVGDLALLRGTRYASELLNIGYFAQHQMDALDGSASPMLQLSRI ADKKISEATLRAFLGSFGFSGERMDTPSESFSGGERARLALALIVWQRPNVLILDEPTNHLDLDMRHALTMALQDFEGAV VLVSHERQLIASVCDELILVHNGSSRDFDGDLHDYANWLRQARNDMMKQGQQPTAPIQSKVEAQPVISKLDKEAQRKEAA KRREQTRPIRKNIEKCESQVERLQKRLAEIETLLGDSSLYDADRKNDLLKLMNEQSDSKQELEQAEEQMLELMMQLEELE SLFD >Mature_644_residues MIQLDQFSVRRGGRVLFQKASMQLHPGWKIGLTGVNGAGKSTLFSALLGGIESDSGSLSRPNVWTVAHMAQEIKALNMKA IDFVLSGDEEYWTIQHQLEHPEQLSDNELAHLYSRFDEINGYAAAAKASQLMAGLGFFEYQSQYDVASFSGGWRMRLNLA RTLMSRSDLLLLDEPTNHLDLDAILWLEDWLKAYEGTLVLISHDRDFLDAITDHILHIENQQLTLYTGNYSTFETTRAER LAQQQQAFEKQQETRAHLQKYIDRFKAQATKARQAQSRIKQLERMQELAPAHVDTPFTFSFREPSKMSSPLLALEHADIG YGDKLIVTNVNLQITPTSRIGLLGMNGAGKSTLIKSLVGDLALLRGTRYASELLNIGYFAQHQMDALDGSASPMLQLSRI ADKKISEATLRAFLGSFGFSGERMDTPSESFSGGERARLALALIVWQRPNVLILDEPTNHLDLDMRHALTMALQDFEGAV VLVSHERQLIASVCDELILVHNGSSRDFDGDLHDYANWLRQARNDMMKQGQQPTAPIQSKVEAQPVISKLDKEAQRKEAA KRREQTRPIRKNIEKCESQVERLQKRLAEIETLLGDSSLYDADRKNDLLKLMNEQSDSKQELEQAEEQMLELMMQLEELE SLFD
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=40.6779661016949, Blast_Score=380, Evalue=1e-105, Organism=Homo sapiens, GI27881506, Length=527, Percent_Identity=34.3453510436433, Blast_Score=308, Evalue=2e-83, Organism=Homo sapiens, GI10947137, Length=527, Percent_Identity=34.3453510436433, Blast_Score=307, Evalue=2e-83, Organism=Homo sapiens, GI10947135, Length=548, Percent_Identity=34.3065693430657, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI69354671, Length=548, Percent_Identity=34.1240875912409, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI150417984, Length=204, Percent_Identity=31.3725490196078, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI45446740, Length=339, Percent_Identity=25.6637168141593, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI47078218, Length=339, Percent_Identity=25.6637168141593, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1789751, Length=641, Percent_Identity=51.4820592823713, Blast_Score=651, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=524, Percent_Identity=32.4427480916031, Blast_Score=303, Evalue=3e-83, Organism=Escherichia coli, GI1787182, Length=635, Percent_Identity=29.7637795275591, Blast_Score=228, Evalue=8e-61, Organism=Escherichia coli, GI2367384, Length=542, Percent_Identity=30.0738007380074, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI87081782, Length=540, Percent_Identity=27.037037037037, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1788165, Length=198, Percent_Identity=29.2929292929293, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1788506, Length=563, Percent_Identity=22.9129662522202, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787029, Length=204, Percent_Identity=27.4509803921569, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787758, Length=193, Percent_Identity=31.6062176165803, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1786975, Length=513, Percent_Identity=24.3664717348928, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1787772, Length=149, Percent_Identity=30.8724832214765, Blast_Score=64, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17553372, Length=529, Percent_Identity=38.3742911153119, Blast_Score=333, Evalue=2e-91, Organism=Caenorhabditis elegans, GI17559834, Length=542, Percent_Identity=32.4723247232472, Blast_Score=307, Evalue=9e-84, Organism=Caenorhabditis elegans, GI17555318, Length=534, Percent_Identity=33.8951310861423, Blast_Score=306, Evalue=2e-83, Organism=Caenorhabditis elegans, GI17565586, Length=210, Percent_Identity=28.0952380952381, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321121, Length=551, Percent_Identity=36.1161524500907, Blast_Score=348, Evalue=2e-96, Organism=Saccharomyces cerevisiae, GI6320874, Length=536, Percent_Identity=33.2089552238806, Blast_Score=296, Evalue=7e-81, Organism=Saccharomyces cerevisiae, GI6325030, Length=379, Percent_Identity=30.3430079155673, Blast_Score=154, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6324314, Length=380, Percent_Identity=29.2105263157895, Blast_Score=150, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6323278, Length=378, Percent_Identity=28.3068783068783, Blast_Score=140, Evalue=4e-34, Organism=Drosophila melanogaster, GI24666836, Length=526, Percent_Identity=40.4942965779468, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI24642252, Length=529, Percent_Identity=37.4291115311909, Blast_Score=343, Evalue=3e-94, Organism=Drosophila melanogaster, GI18859989, Length=529, Percent_Identity=37.4291115311909, Blast_Score=343, Evalue=3e-94, Organism=Drosophila melanogaster, GI24641342, Length=533, Percent_Identity=32.6454033771107, Blast_Score=290, Evalue=2e-78, Organism=Drosophila melanogaster, GI24643674, Length=221, Percent_Identity=29.8642533936652, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI221512771, Length=199, Percent_Identity=32.1608040201005, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI116007184, Length=195, Percent_Identity=31.2820512820513, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI221500365, Length=195, Percent_Identity=31.2820512820513, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 72753; Mature: 72753
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQLDQFSVRRGGRVLFQKASMQLHPGWKIGLTGVNGAGKSTLFSALLGGIESDSGSLSR CCCCCCHHHHCCCCEEEEECCCEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC PNVWTVAHMAQEIKALNMKAIDFVLSGDEEYWTIQHQLEHPEQLSDNELAHLYSRFDEIN CCHHHHHHHHHHHHHHCHHHEEEEECCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHC GYAAAAKASQLMAGLGFFEYQSQYDVASFSGGWRMRLNLARTLMSRSDLLLLDEPTNHLD CHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEEECCCCCCC LDAILWLEDWLKAYEGTLVLISHDRDFLDAITDHILHIENQQLTLYTGNYSTFETTRAER HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHH LAQQQQAFEKQQETRAHLQKYIDRFKAQATKARQAQSRIKQLERMQELAPAHVDTPFTFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE FREPSKMSSPLLALEHADIGYGDKLIVTNVNLQITPTSRIGLLGMNGAGKSTLIKSLVGD CCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH LALLRGTRYASELLNIGYFAQHQMDALDGSASPMLQLSRIADKKISEATLRAFLGSFGFS HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GERMDTPSESFSGGERARLALALIVWQRPNVLILDEPTNHLDLDMRHALTMALQDFEGAV CCCCCCCCHHCCCCHHHHHEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE VLVSHERQLIASVCDELILVHNGSSRDFDGDLHDYANWLRQARNDMMKQGQQPTAPIQSK EEEECHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH VEAQPVISKLDKEAQRKEAAKRREQTRPIRKNIEKCESQVERLQKRLAEIETLLGDSSLY HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC DADRKNDLLKLMNEQSDSKQELEQAEEQMLELMMQLEELESLFD CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIQLDQFSVRRGGRVLFQKASMQLHPGWKIGLTGVNGAGKSTLFSALLGGIESDSGSLSR CCCCCCHHHHCCCCEEEEECCCEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC PNVWTVAHMAQEIKALNMKAIDFVLSGDEEYWTIQHQLEHPEQLSDNELAHLYSRFDEIN CCHHHHHHHHHHHHHHCHHHEEEEECCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHC GYAAAAKASQLMAGLGFFEYQSQYDVASFSGGWRMRLNLARTLMSRSDLLLLDEPTNHLD CHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEEECCCCCCC LDAILWLEDWLKAYEGTLVLISHDRDFLDAITDHILHIENQQLTLYTGNYSTFETTRAER HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHH LAQQQQAFEKQQETRAHLQKYIDRFKAQATKARQAQSRIKQLERMQELAPAHVDTPFTFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE FREPSKMSSPLLALEHADIGYGDKLIVTNVNLQITPTSRIGLLGMNGAGKSTLIKSLVGD CCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHH LALLRGTRYASELLNIGYFAQHQMDALDGSASPMLQLSRIADKKISEATLRAFLGSFGFS HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GERMDTPSESFSGGERARLALALIVWQRPNVLILDEPTNHLDLDMRHALTMALQDFEGAV CCCCCCCCHHCCCCHHHHHEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE VLVSHERQLIASVCDELILVHNGSSRDFDGDLHDYANWLRQARNDMMKQGQQPTAPIQSK EEEECHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH VEAQPVISKLDKEAQRKEAAKRREQTRPIRKNIEKCESQVERLQKRLAEIETLLGDSSLY HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC DADRKNDLLKLMNEQSDSKQELEQAEEQMLELMMQLEELESLFD CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]