Click here to switch to the map view.

The map label for this gene is yqkB [H]

Identifier: 49481632

GI number: 49481632

Start: 4557838

End: 4558161

Strand: Reverse

Name: yqkB [H]

Synonym: BT9727_4506

Alternate gene names: 49481632

Gene position: 4558161-4557838 (Counterclockwise)

Preceding gene: 49478756

Following gene: 49481329

Centisome position: 87.03

GC content: 37.04

Gene sequence:

>324_bases
ATGTACGTTACTGTAACAGAAGCAGCATATAAAAAAATTATGGATACGATTCCAAATGAGGCGAAATATATAAAGTTATT
TTACGATAATGAAGGTTGCGGTTGTGTAATGAGCGGCATTATCGATTTAGTAGCTGTAACAGAAAAAGATGAGCGCGATG
TGGATATCGAATCTAGCGCAATGAATTTTATCGCAGATCGCACAAAGCTTGTATTTATGGATGATAAATTAACAGTTGAT
TGGCGTGAAGGTGGAGGGACTTTTCAGTTGAAGAGCCCGAGCCAATTTTATAATCCAAATATGAAGTTACACGTTCGAGT
GTAG

Upstream 100 bases:

>100_bases
CATACATTGTATATTGTTCGTAATTTTCTGTATATATTTTTAAAGAAAAATGGTGGTACAATATATGAAGGATACGAGAA
GAGAGGATGAAGTTTAGAAT

Downstream 100 bases:

>100_bases
TAAAGAAAAGGTGGTTCCAAAACGTATTTTGGAGCCACCTTTTTTATTGTATAAGTCGCTATTATTGTCGTTTTTTGTTG
ATAAGTCGATATATATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MYVTVTEAAYKKIMDTIPNEAKYIKLFYDNEGCGCVMSGIIDLVAVTEKDERDVDIESSAMNFIADRTKLVFMDDKLTVD
WREGGGTFQLKSPSQFYNPNMKLHVRV

Sequences:

>Translated_107_residues
MYVTVTEAAYKKIMDTIPNEAKYIKLFYDNEGCGCVMSGIIDLVAVTEKDERDVDIESSAMNFIADRTKLVFMDDKLTVD
WREGGGTFQLKSPSQFYNPNMKLHVRV
>Mature_107_residues
MYVTVTEAAYKKIMDTIPNEAKYIKLFYDNEGCGCVMSGIIDLVAVTEKDERDVDIESSAMNFIADRTKLVFMDDKLTVD
WREGGGTFQLKSPSQFYNPNMKLHVRV

Specific function: Unknown

COG id: COG4918

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12212; Mature: 12212

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVTVTEAAYKKIMDTIPNEAKYIKLFYDNEGCGCVMSGIIDLVAVTEKDERDVDIESSA
CEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHEEEECCCCCCCCCCCHHH
MNFIADRTKLVFMDDKLTVDWREGGGTFQLKSPSQFYNPNMKLHVRV
HHHHCCCEEEEEECCCEEEEEECCCCEEEECCCHHHCCCCEEEEEEC
>Mature Secondary Structure
MYVTVTEAAYKKIMDTIPNEAKYIKLFYDNEGCGCVMSGIIDLVAVTEKDERDVDIESSA
CEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHEEEECCCCCCCCCCCHHH
MNFIADRTKLVFMDDKLTVDWREGGGTFQLKSPSQFYNPNMKLHVRV
HHHHCCCEEEEEECCCEEEEEECCCCEEEECCCHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]