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The map label for this gene is yvcS [H]

Identifier: 49481524

GI number: 49481524

Start: 4232035

End: 4233948

Strand: Reverse

Name: yvcS [H]

Synonym: BT9727_4169

Alternate gene names: 49481524

Gene position: 4233948-4232035 (Counterclockwise)

Preceding gene: 49481525

Following gene: 49478853

Centisome position: 80.84

GC content: 34.06

Gene sequence:

>1914_bases
ATGAACATTCGGCAACTAGCGCTGCAAAATATAAAAGGAAATTGGCGTAATTACAAAGTGTTTTTCTTAAGTAGTTGTTT
TGCAATATTTGCGTCTTTTGCATACATGTCTGTCATTGTACATCCGTATATGCAGGAGACGATGTGGTATCAAAACGTAC
GCTGGGGATTGATCATATGTAATGTTATTATCATTTCTTTTTTCGTCATATTTATTTTGTACTCTACTTCTATTTTCATA
GAGGCACGTAAGAAAGAATTAGGATTATATATGTTAATGGGAGCGACGAAATCTAGCGTAATTGGCGTAATTATGACCGA
GCAAATGTTGATCGGGGTATTTGCTAATATTTTTGGCATCGGGCTTGGCATGATCTTTTTAAAGCTCTTCTTTATGGTGT
TTAGTATGTTGTTGGGGTTTCCGAGAGAACTCCCTGTCATATTTGACTTAAGAGCAATTGGAGGAACGTTTATTGCGTAT
ATGGCCGTATTTGTTCTCTTATCATTTATAAGTGCTTTACGTATATGGAATATAAAAATCATTCGGTTATTGAAAGAATT
TCGAACAGATAAAAAAGAGAAGAAAACGTCAATGTGGCTTTGTATATTCGGCTTTATTTGTTTAGGGATAGGATATGCGT
TAGCGTTACGAGCTACGATGCCAACGATAGCGTTATACTTCTTTTTGCCTGTGTCTATACTTGTCTTTTTCGGAACGTAT
TTTTCATTTACACATGGTACTGCTCAAATATTAGAAATGATAAAACGAAATAAAAAGATTATGTATACATATCCGTATTT
ATTTATAGTGAATCAATTGTCAAATCGAATGAAGGAAAATGGTCGTTTTTTCTTTTTAATGTCAATGGCAACGACGTTTG
TAGTTACGGCAACAGGTACAGTGTTCTTATATTTTTCTGGTATGCAAGATATGTGGCGGGGCGGGGGCGTGCACTCATTT
TCTTACATAGAAAAAGGTACTTCTTCTCATGAAGTCTTTGCGGAAGGAACGGTTGAACAATTATTGCACCAATATGGGTA
TGATGATTTTCAATATAGGAGTTTTGTTGGAGTGTATGCATCTTTTCAGTCCAATAAGGGAGAAACGACAATAGTACCGC
TTATAAAAGGAAGTGAATATAACCAAGAAGCGAGGAAACAAAAACAGAAAACGTATTATCCTAAAAAAGGTACAGTGACA
CTCGTTTATTATAATAAATACAATAATTCGAATGTATATAATCAAAAAGAGATTCAATTGCAAGTAATGAATCAACCATA
TCAATTCGTATTTAACGGCCAGAAAGAAGGGATTCAATTTAACTATCATCCTTCGTATATTAACGGGCTGTTCTTCGTCA
TGAATGATGAAGACTTTGACAGTATAGCAAATCAGGTTCCTGATTCTGAAAAAATGATATATAGAGGCTATACATTACCA
AATATCGAAAATACGAAAGAATTAAATGAAGATTTACGGAAACATATGAAACAAGATAATAATGCATTTCGAAGCAATAT
GGAATTATATGTGAATATGAAATCGTTCGGTGATATTACTCTATTTCTAGGCTCATTCATTAGTATATTATTTTTCCTTA
CATCATGTAGCATCGTATATTTTAAATGGTTCCATAATATTGCATCGGACCGAAAGCAGTACGGGGTGCTCTCTAAACTG
GGAATGACAAAGGAAGAAGTATGGAAGATTTCCCGCTGGCAATTATGTATGCTATTTTTTGCGCCAATTATAGTAGGGAG
TATGCATAGTGCAGTTGCGTTATATACGTTTCATAATATGATGTTTATGGATGGTTCATTAAGAAAAGTAGGCTTGTTTA
TTCTATTTTATATCGCTGCATGCATCATGTATTTCTTTTTCGCTCAAAGAGAATATAGGAAACATTTAGACTAG

Upstream 100 bases:

>100_bases
ATTTACTTTATAATCGCGCAAAGAGGATATTTGAAACACGTGAAAAGCTAGAGAAATCTCTAGCTTTTTGCCTATGTAGT
AAGTTATAGGGGGACGATAG

Downstream 100 bases:

>100_bases
CGAATGCTAGTCTTTTTTAAATATTCGAAATTTACATAGAAGAATATAAAAAAGTATGGTATAACAGTAAGAAAATGAAA
AAGAGGGGAAAAGACGATGA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQETMWYQNVRWGLIICNVIIISFFVIFILYSTSIFI
EARKKELGLYMLMGATKSSVIGVIMTEQMLIGVFANIFGIGLGMIFLKLFFMVFSMLLGFPRELPVIFDLRAIGGTFIAY
MAVFVLLSFISALRIWNIKIIRLLKEFRTDKKEKKTSMWLCIFGFICLGIGYALALRATMPTIALYFFLPVSILVFFGTY
FSFTHGTAQILEMIKRNKKIMYTYPYLFIVNQLSNRMKENGRFFFLMSMATTFVVTATGTVFLYFSGMQDMWRGGGVHSF
SYIEKGTSSHEVFAEGTVEQLLHQYGYDDFQYRSFVGVYASFQSNKGETTIVPLIKGSEYNQEARKQKQKTYYPKKGTVT
LVYYNKYNNSNVYNQKEIQLQVMNQPYQFVFNGQKEGIQFNYHPSYINGLFFVMNDEDFDSIANQVPDSEKMIYRGYTLP
NIENTKELNEDLRKHMKQDNNAFRSNMELYVNMKSFGDITLFLGSFISILFFLTSCSIVYFKWFHNIASDRKQYGVLSKL
GMTKEEVWKISRWQLCMLFFAPIIVGSMHSAVALYTFHNMMFMDGSLRKVGLFILFYIAACIMYFFFAQREYRKHLD

Sequences:

>Translated_637_residues
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQETMWYQNVRWGLIICNVIIISFFVIFILYSTSIFI
EARKKELGLYMLMGATKSSVIGVIMTEQMLIGVFANIFGIGLGMIFLKLFFMVFSMLLGFPRELPVIFDLRAIGGTFIAY
MAVFVLLSFISALRIWNIKIIRLLKEFRTDKKEKKTSMWLCIFGFICLGIGYALALRATMPTIALYFFLPVSILVFFGTY
FSFTHGTAQILEMIKRNKKIMYTYPYLFIVNQLSNRMKENGRFFFLMSMATTFVVTATGTVFLYFSGMQDMWRGGGVHSF
SYIEKGTSSHEVFAEGTVEQLLHQYGYDDFQYRSFVGVYASFQSNKGETTIVPLIKGSEYNQEARKQKQKTYYPKKGTVT
LVYYNKYNNSNVYNQKEIQLQVMNQPYQFVFNGQKEGIQFNYHPSYINGLFFVMNDEDFDSIANQVPDSEKMIYRGYTLP
NIENTKELNEDLRKHMKQDNNAFRSNMELYVNMKSFGDITLFLGSFISILFFLTSCSIVYFKWFHNIASDRKQYGVLSKL
GMTKEEVWKISRWQLCMLFFAPIIVGSMHSAVALYTFHNMMFMDGSLRKVGLFILFYIAACIMYFFFAQREYRKHLD
>Mature_637_residues
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQETMWYQNVRWGLIICNVIIISFFVIFILYSTSIFI
EARKKELGLYMLMGATKSSVIGVIMTEQMLIGVFANIFGIGLGMIFLKLFFMVFSMLLGFPRELPVIFDLRAIGGTFIAY
MAVFVLLSFISALRIWNIKIIRLLKEFRTDKKEKKTSMWLCIFGFICLGIGYALALRATMPTIALYFFLPVSILVFFGTY
FSFTHGTAQILEMIKRNKKIMYTYPYLFIVNQLSNRMKENGRFFFLMSMATTFVVTATGTVFLYFSGMQDMWRGGGVHSF
SYIEKGTSSHEVFAEGTVEQLLHQYGYDDFQYRSFVGVYASFQSNKGETTIVPLIKGSEYNQEARKQKQKTYYPKKGTVT
LVYYNKYNNSNVYNQKEIQLQVMNQPYQFVFNGQKEGIQFNYHPSYINGLFFVMNDEDFDSIANQVPDSEKMIYRGYTLP
NIENTKELNEDLRKHMKQDNNAFRSNMELYVNMKSFGDITLFLGSFISILFFLTSCSIVYFKWFHNIASDRKQYGVLSKL
GMTKEEVWKISRWQLCMLFFAPIIVGSMHSAVALYTFHNMMFMDGSLRKVGLFILFYIAACIMYFFFAQREYRKHLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 74370; Mature: 74370

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQETMWYQNVRWGLIIC
CCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NVIIISFFVIFILYSTSIFIEARKKELGLYMLMGATKSSVIGVIMTEQMLIGVFANIFGI
HHHHHHHHHHHHHHHHHHEEEEHHHHCCEEEEECCCCHHHEEHHHHHHHHHHHHHHHHHH
GLGMIFLKLFFMVFSMLLGFPRELPVIFDLRAIGGTFIAYMAVFVLLSFISALRIWNIKI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRLLKEFRTDKKEKKTSMWLCIFGFICLGIGYALALRATMPTIALYFFLPVSILVFFGTY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSFTHGTAQILEMIKRNKKIMYTYPYLFIVNQLSNRMKENGRFFFLMSMATTFVVTATGT
HHHCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEHHHHHHEEEECCE
VFLYFSGMQDMWRGGGVHSFSYIEKGTSSHEVFAEGTVEQLLHQYGYDDFQYRSFVGVYA
EEEEECCHHHHHCCCCCCCHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH
SFQSNKGETTIVPLIKGSEYNQEARKQKQKTYYPKKGTVTLVYYNKYNNSNVYNQKEIQL
HHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHEEE
QVMNQPYQFVFNGQKEGIQFNYHPSYINGLFFVMNDEDFDSIANQVPDSEKMIYRGYTLP
EECCCCEEEEECCCCCCEEEECCCHHHCCEEEEECCCCHHHHHHHCCCCCCEEEECCCCC
NIENTKELNEDLRKHMKQDNNAFRSNMELYVNMKSFGDITLFLGSFISILFFLTSCSIVY
CCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
FKWFHNIASDRKQYGVLSKLGMTKEEVWKISRWQLCMLFFAPIIVGSMHSAVALYTFHNM
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFMDGSLRKVGLFILFYIAACIMYFFFAQREYRKHLD
HEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQETMWYQNVRWGLIIC
CCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NVIIISFFVIFILYSTSIFIEARKKELGLYMLMGATKSSVIGVIMTEQMLIGVFANIFGI
HHHHHHHHHHHHHHHHHHEEEEHHHHCCEEEEECCCCHHHEEHHHHHHHHHHHHHHHHHH
GLGMIFLKLFFMVFSMLLGFPRELPVIFDLRAIGGTFIAYMAVFVLLSFISALRIWNIKI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRLLKEFRTDKKEKKTSMWLCIFGFICLGIGYALALRATMPTIALYFFLPVSILVFFGTY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSFTHGTAQILEMIKRNKKIMYTYPYLFIVNQLSNRMKENGRFFFLMSMATTFVVTATGT
HHHCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEHHHHHHEEEECCE
VFLYFSGMQDMWRGGGVHSFSYIEKGTSSHEVFAEGTVEQLLHQYGYDDFQYRSFVGVYA
EEEEECCHHHHHCCCCCCCHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH
SFQSNKGETTIVPLIKGSEYNQEARKQKQKTYYPKKGTVTLVYYNKYNNSNVYNQKEIQL
HHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHEEE
QVMNQPYQFVFNGQKEGIQFNYHPSYINGLFFVMNDEDFDSIANQVPDSEKMIYRGYTLP
EECCCCEEEEECCCCCCEEEECCCHHHCCEEEEECCCCHHHHHHHCCCCCCEEEECCCCC
NIENTKELNEDLRKHMKQDNNAFRSNMELYVNMKSFGDITLFLGSFISILFFLTSCSIVY
CCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
FKWFHNIASDRKQYGVLSKLGMTKEEVWKISRWQLCMLFFAPIIVGSMHSAVALYTFHNM
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFMDGSLRKVGLFILFYIAACIMYFFFAQREYRKHLD
HEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]