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The map label for this gene is spoVID

Identifier: 49481447

GI number: 49481447

Start: 4257225

End: 4258202

Strand: Reverse

Name: spoVID

Synonym: BT9727_4193

Alternate gene names: 49481447

Gene position: 4258202-4257225 (Counterclockwise)

Preceding gene: 49478643

Following gene: 49481446

Centisome position: 81.3

GC content: 37.22

Gene sequence:

>978_bases
GTGGCAACAGATCATTCATTACGTTTTTCATTAAAAGAATCTGTTTGGTTCCAAAAAGGACAGGAAGTCGAAGAACTTTT
GTCAATTTCGTTAGATCCAGACGTTGAGATAGAAGAGCTTGATCATGAGGTTATTGTGAGAGGGCAATTAGATTTAACGG
GAGAGTATGTTGCAAGGCAAGATGATTCAGCTTATTCATTAAGAGATCTATCGCCAGCGAAGTCAATTGATTATGTAGAA
ACGAGAGAAGATGGGGTTAATGAACTTGTTCATTCCTTTCCGCTTGAAATATCAATCCCAAGAAACCGTGTGAAAGTAAT
TGAAGAACTATATGTATCCATCGAGGAATTTGATTATGAACTAAAGGAAAATGGTTGCTTACAATTATTAGCGGATATAT
CTATTACAGGTTTATGTGATGAAGAACGCATCGAGGATGAAGAGGAAGAAACGGCGTATGCTGAGTTGGAAGTTGACTCA
GCACAAGAGGAGGAAAATAGACCAACGCCGCACGTAGAAGAACCAGCTTATAAGGAATCAGATGAGTGGGAAGATTATGC
ATTTGAACCGTTCCAACTAGAAGAAAGAAAAGAGCAGGAAGTAGAGGAAGAGGAAATAGAAGAACATGAATTTGTAGAGC
GTGAAGAGGAGAAAGAAACAACGCCGCAATTTGAATTGTTCGGACGAAAAGATTTCAAGAAAGAACCAGCGAAAAAACAA
GAAGAACAAGAAGAGGAAACGTATTCACAGCGAGATGAAAATGCGCTGTATTTAACGAAATTATTTACGAAAGAACCGGA
AGAAGAATTTACAAAGTTAAGAATGTATTTCGTGCAAGAAGGAGATACGATCGAATCGGTTGCAGAACGTTATGAAACAT
CTGTACAAAACTTATACCGTGTCAATCAAACAGAAGATATATATTTAACTACAGGACAAATTATTTATATTCCTGTTTCA
AGAGCAAAAGCGAAATAA

Upstream 100 bases:

>100_bases
GAAAATCGCTCTCCATAAGGGGAGCGATTTTTTTTATTCATAAAGTCAGCTTTCCGTACATAAATCTGTAATGACATATA
GTTTGGGAGGGGGAAAAGAA

Downstream 100 bases:

>100_bases
GTGAGTGTTTTCACTCACTTATTTTTCTAAAGGCTATGTTTTGAATAGAAAGGGTTATTCGTATGGATATGGAATTACGA
AATCGCTATGAACCCATTGT

Product: stage VI sporulation protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MATDHSLRFSLKESVWFQKGQEVEELLSISLDPDVEIEELDHEVIVRGQLDLTGEYVARQDDSAYSLRDLSPAKSIDYVE
TREDGVNELVHSFPLEISIPRNRVKVIEELYVSIEEFDYELKENGCLQLLADISITGLCDEERIEDEEEETAYAELEVDS
AQEEENRPTPHVEEPAYKESDEWEDYAFEPFQLEERKEQEVEEEEIEEHEFVEREEEKETTPQFELFGRKDFKKEPAKKQ
EEQEEETYSQRDENALYLTKLFTKEPEEEFTKLRMYFVQEGDTIESVAERYETSVQNLYRVNQTEDIYLTTGQIIYIPVS
RAKAK

Sequences:

>Translated_325_residues
MATDHSLRFSLKESVWFQKGQEVEELLSISLDPDVEIEELDHEVIVRGQLDLTGEYVARQDDSAYSLRDLSPAKSIDYVE
TREDGVNELVHSFPLEISIPRNRVKVIEELYVSIEEFDYELKENGCLQLLADISITGLCDEERIEDEEEETAYAELEVDS
AQEEENRPTPHVEEPAYKESDEWEDYAFEPFQLEERKEQEVEEEEIEEHEFVEREEEKETTPQFELFGRKDFKKEPAKKQ
EEQEEETYSQRDENALYLTKLFTKEPEEEFTKLRMYFVQEGDTIESVAERYETSVQNLYRVNQTEDIYLTTGQIIYIPVS
RAKAK
>Mature_324_residues
ATDHSLRFSLKESVWFQKGQEVEELLSISLDPDVEIEELDHEVIVRGQLDLTGEYVARQDDSAYSLRDLSPAKSIDYVET
REDGVNELVHSFPLEISIPRNRVKVIEELYVSIEEFDYELKENGCLQLLADISITGLCDEERIEDEEEETAYAELEVDSA
QEEENRPTPHVEEPAYKESDEWEDYAFEPFQLEERKEQEVEEEEIEEHEFVEREEEKETTPQFELFGRKDFKKEPAKKQE
EQEEETYSQRDENALYLTKLFTKEPEEEFTKLRMYFVQEGDTIESVAERYETSVQNLYRVNQTEDIYLTTGQIIYIPVSR
AKAK

Specific function: Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR014256 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 38351; Mature: 38220

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDHSLRFSLKESVWFQKGQEVEELLSISLDPDVEIEELDHEVIVRGQLDLTGEYVARQ
CCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCHHHHHCC
DDSAYSLRDLSPAKSIDYVETREDGVNELVHSFPLEISIPRNRVKVIEELYVSIEEFDYE
CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHH
LKENGCLQLLADISITGLCDEERIEDEEEETAYAELEVDSAQEEENRPTPHVEEPAYKES
HCCCCHHHHHHHCCEECCCCHHHCCCCHHHHEEEEEECCCCHHHCCCCCCCCCCCCCCCC
DEWEDYAFEPFQLEERKEQEVEEEEIEEHEFVEREEEKETTPQFELFGRKDFKKEPAKKQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCHHHH
EEQEEETYSQRDENALYLTKLFTKEPEEEFTKLRMYFVQEGDTIESVAERYETSVQNLYR
HHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VNQTEDIYLTTGQIIYIPVSRAKAK
CCCCCEEEEECCEEEEEECCCCCCC
>Mature Secondary Structure 
ATDHSLRFSLKESVWFQKGQEVEELLSISLDPDVEIEELDHEVIVRGQLDLTGEYVARQ
CCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCHHHHHCC
DDSAYSLRDLSPAKSIDYVETREDGVNELVHSFPLEISIPRNRVKVIEELYVSIEEFDYE
CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHH
LKENGCLQLLADISITGLCDEERIEDEEEETAYAELEVDSAQEEENRPTPHVEEPAYKES
HCCCCHHHHHHHCCEECCCCHHHCCCCHHHHEEEEEECCCCHHHCCCCCCCCCCCCCCCC
DEWEDYAFEPFQLEERKEQEVEEEEIEEHEFVEREEEKETTPQFELFGRKDFKKEPAKKQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCHHHH
EEQEEETYSQRDENALYLTKLFTKEPEEEFTKLRMYFVQEGDTIESVAERYETSVQNLYR
HHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VNQTEDIYLTTGQIIYIPVSRAKAK
CCCCCEEEEECCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8449878; 9384377 [H]