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The map label for this gene is lytR

Identifier: 49481246

GI number: 49481246

Start: 5000690

End: 5001604

Strand: Reverse

Name: lytR

Synonym: BT9727_4947

Alternate gene names: 49481246

Gene position: 5001604-5000690 (Counterclockwise)

Preceding gene: 49478936

Following gene: 49478935

Centisome position: 95.49

GC content: 34.97

Gene sequence:

>915_bases
GTGAGAAAAAAGATTTTTTTATGGGTTTTAAGCATTCTAGGTTTGCTACTACTCATAGGAGGAATATATGTTTATCGTGT
TTATTCTAATGTATCAAGTACGTTAGATTCGGTGCATCAACCATTAAAACGCGATAAGTCTGAAAAGCGTGATCAAAAAA
TAAACCTTACTGATCAAAAACCCATTTCAATTTTATTAATGGGAGTTGACCAAAGAGGAGAAGAAACTGGTCGATCAGAT
TCGCTTATGCTATTTACTTTAAATCCAAAAACTAAGTCTATGAAAATTACAAGTATCCCTCGTGATTCTTATACTGAAAT
TATTGGGAAAGGTAAGAAAGATAAAATTAATCATGCTTATGCATTTGGTGGTATTGACATGGCTGTGAAAACAGTGGAGA
ATTTTCTTGATATCCCAGTTGATCATTACATTGAAGTAAATATGGAAGGATTCAAGGATATTGTAGATGCTGTAGGTGGT
GTGGAGGTCAATAATGATTTAGAATTTACATCAGTAGGTACACATTTTGAAAAAGGAAATTTACACTTAGATGGTGAAAA
AGCTTTAAAATACTCTCGTATGCGTTATGAAGATCCACGTGGTGACTTCGGTCGCCAAATGCGCCAACGTCAAGTCATCC
AAGCTGTAATTAAAAAGGGTGCAAGTGTATCTTCTCTAGCAAGCTACGGTGATGTATTAAAAGCAATTGAGAAAAATGTT
AAAACAAGTTTAACTCAAGAGCAAATGTTTGATATTCAAAAGAACTATAAAGATTGCATGCAGAACAGTGAAGAAATCCA
AATCCCAGGTGACGGCCACAAAGCCGCTGATGGTATTTGGTATTACTACGTTCCAGATGCAGCGAAACAAGATATTACGA
ATAAGTTAAGAGCGCATCTTGAAGTGACTAAGTAA

Upstream 100 bases:

>100_bases
CCTTTAAATATGGACGGCAAGTATACTTCTTGATCTGAATATTTAATAGAGAAATATTAATTCAACTTTAAGAGATACCA
ATGAAAAGGAGGAGAGAACT

Downstream 100 bases:

>100_bases
TATGTAATAACCCAACTCCTTTGGTAGGAGTTGGGTTTATTTTTGCGTGAATTTATATTAGTATTATATGTTGTGAGAAT
AATAGATGAGGTGAATCGAT

Product: membrane-bound transcriptional regulator LytR

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRKKIFLWVLSILGLLLLIGGIYVYRVYSNVSSTLDSVHQPLKRDKSEKRDQKINLTDQKPISILLMGVDQRGEETGRSD
SLMLFTLNPKTKSMKITSIPRDSYTEIIGKGKKDKINHAYAFGGIDMAVKTVENFLDIPVDHYIEVNMEGFKDIVDAVGG
VEVNNDLEFTSVGTHFEKGNLHLDGEKALKYSRMRYEDPRGDFGRQMRQRQVIQAVIKKGASVSSLASYGDVLKAIEKNV
KTSLTQEQMFDIQKNYKDCMQNSEEIQIPGDGHKAADGIWYYYVPDAAKQDITNKLRAHLEVTK

Sequences:

>Translated_304_residues
MRKKIFLWVLSILGLLLLIGGIYVYRVYSNVSSTLDSVHQPLKRDKSEKRDQKINLTDQKPISILLMGVDQRGEETGRSD
SLMLFTLNPKTKSMKITSIPRDSYTEIIGKGKKDKINHAYAFGGIDMAVKTVENFLDIPVDHYIEVNMEGFKDIVDAVGG
VEVNNDLEFTSVGTHFEKGNLHLDGEKALKYSRMRYEDPRGDFGRQMRQRQVIQAVIKKGASVSSLASYGDVLKAIEKNV
KTSLTQEQMFDIQKNYKDCMQNSEEIQIPGDGHKAADGIWYYYVPDAAKQDITNKLRAHLEVTK
>Mature_304_residues
MRKKIFLWVLSILGLLLLIGGIYVYRVYSNVSSTLDSVHQPLKRDKSEKRDQKINLTDQKPISILLMGVDQRGEETGRSD
SLMLFTLNPKTKSMKITSIPRDSYTEIIGKGKKDKINHAYAFGGIDMAVKTVENFLDIPVDHYIEVNMEGFKDIVDAVGG
VEVNNDLEFTSVGTHFEKGNLHLDGEKALKYSRMRYEDPRGDFGRQMRQRQVIQAVIKKGASVSSLASYGDVLKAIEKNV
KTSLTQEQMFDIQKNYKDCMQNSEEIQIPGDGHKAADGIWYYYVPDAAKQDITNKLRAHLEVTK

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 34445; Mature: 34445

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKIFLWVLSILGLLLLIGGIYVYRVYSNVSSTLDSVHQPLKRDKSEKRDQKINLTDQK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PISILLMGVDQRGEETGRSDSLMLFTLNPKTKSMKITSIPRDSYTEIIGKGKKDKINHAY
CEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHCCCCCCCCCCEE
AFGGIDMAVKTVENFLDIPVDHYIEVNMEGFKDIVDAVGGVEVNNDLEFTSVGTHFEKGN
EECCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCEEECCCCEEEECCCEEECCC
LHLDGEKALKYSRMRYEDPRGDFGRQMRQRQVIQAVIKKGASVSSLASYGDVLKAIEKNV
EEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KTSLTQEQMFDIQKNYKDCMQNSEEIQIPGDGHKAADGIWYYYVPDAAKQDITNKLRAHL
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
EVTK
CCCC
>Mature Secondary Structure
MRKKIFLWVLSILGLLLLIGGIYVYRVYSNVSSTLDSVHQPLKRDKSEKRDQKINLTDQK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PISILLMGVDQRGEETGRSDSLMLFTLNPKTKSMKITSIPRDSYTEIIGKGKKDKINHAY
CEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHCCCCCCCCCCEE
AFGGIDMAVKTVENFLDIPVDHYIEVNMEGFKDIVDAVGGVEVNNDLEFTSVGTHFEKGN
EECCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCEEECCCCEEEECCCEEECCC
LHLDGEKALKYSRMRYEDPRGDFGRQMRQRQVIQAVIKKGASVSSLASYGDVLKAIEKNV
EEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KTSLTQEQMFDIQKNYKDCMQNSEEIQIPGDGHKAADGIWYYYVPDAAKQDITNKLRAHL
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
EVTK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA