BacMap

Definition	Bacillus thuringiensis serovar konkukian str. 97-27 chromosome, complete genome.
Accession	NC_005957
Length	5,237,682

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The map label for this gene is ytrB [H]

Identifier: 49480939

GI number: 49480939

Start: 4034305

End: 4035177

Strand: Reverse

Name: ytrB [H]

Synonym: BT9727_3965

Alternate gene names: 49480939

Gene position: 4035177-4034305 (Counterclockwise)

Preceding gene: 49478585

Following gene: 49478584

Centisome position: 77.04

GC content: 33.79

Gene sequence:

>873_bases
ATGTTAGAGCTAAAAAACGTTTGTAAAAGTTATGAAGATTTTGCAGTGAAAAATATAAGTTTTACGTTACCACGCGGATA
TATTATGGGATTTGTCGGACCGAATGGGGCCGGGAAAAGTACGACAATCAAAATGATTATGAATTTAATTAAAAAAGATA
GCGGCGAAATAAAAATTTTTGGCAAGGACAATAAGAAAGCCGAAAAGGAAATAAAACAAAATATCGGATTTGTATATGAT
GAAAATCATTATTACGAAGATTTAACGTGTGAACAAATGAAACGTATTATTGCACCGTTATATAAAAAGTGGGATGAAGA
GCAGTATCAATCGTATATGCATAGATTGCAAGTTCCGAAGTATAAAAAAATTAAAGAACTATCAAAAGGGATGAAAATGA
AGTTTGCGATTGCCATCGCGCTCTCGCATCACGCAGAGTTTATCATCATGGATGAACCGACAGCAGGATTAGATCCAGTT
GTTCGAAGTGAATTGCTTGATATGTTGCAAGAGATTGTAATGGAAGATGAAGTATCTGTATTATTCTCAACTCATATTAC
AACAGACTTAGAGCGCATCGCAGATTATATTACGTTTATCAACGATGGAGAAATTATATTTACTGGTGAGAAAGAAGAAT
TAATGGAGAACTACGTAATTGTAAAAGGAAGTAATGATTTATTAGATCGAGAAGGAAAAGAACTATTTGTTGGATTACGA
AAAAATAAGTTTGGTTTTGAAGGTTTAGCGAATGATAAACAAGCAATCATAGATTGGTTTGGAAATGAGGTTGTACTAGA
AAAGCCTACATTAGATGATATTATCGTTTACACCGCGAAAGGAAGAGGTGCCTATGCGTCAGCTCGTATATAA

Upstream 100 bases:

>100_bases
AAGTAAAGCGGAAGAGATTGTGAATGAAAGTAAAGCGTTGCAGCTTTCACTTGAAGATTTACAGCAGATGATAGCGTGTT
TATATGAGGGGGAATAAAGG

Downstream 100 bases:

>100_bases
AGATTTGTTCTTTTTTCGGGCGATTTGGTTAGTGTATCTAATTATGCCACTAATGTTTTCTTTTATAGAGCCGATTGGTG
AAACGGTATTTTCTTTAAGT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIFGKDNKKAEKEIKQNIGFVYD
ENHYYEDLTCEQMKRIIAPLYKKWDEEQYQSYMHRLQVPKYKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPV
VRSELLDMLQEIVMEDEVSVLFSTHITTDLERIADYITFINDGEIIFTGEKEELMENYVIVKGSNDLLDREGKELFVGLR
KNKFGFEGLANDKQAIIDWFGNEVVLEKPTLDDIIVYTAKGRGAYASARI

Sequences:

>Translated_290_residues
MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIFGKDNKKAEKEIKQNIGFVYD
ENHYYEDLTCEQMKRIIAPLYKKWDEEQYQSYMHRLQVPKYKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPV
VRSELLDMLQEIVMEDEVSVLFSTHITTDLERIADYITFINDGEIIFTGEKEELMENYVIVKGSNDLLDREGKELFVGLR
KNKFGFEGLANDKQAIIDWFGNEVVLEKPTLDDIIVYTAKGRGAYASARI
>Mature_290_residues
MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIFGKDNKKAEKEIKQNIGFVYD
ENHYYEDLTCEQMKRIIAPLYKKWDEEQYQSYMHRLQVPKYKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPV
VRSELLDMLQEIVMEDEVSVLFSTHITTDLERIADYITFINDGEIIFTGEKEELMENYVIVKGSNDLLDREGKELFVGLR
KNKFGFEGLANDKQAIIDWFGNEVVLEKPTLDDIIVYTAKGRGAYASARI

Specific function: Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27881501, Length=225, Percent_Identity=29.3333333333333, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI30795238, Length=225, Percent_Identity=29.3333333333333, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI45446740, Length=209, Percent_Identity=30.1435406698565, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI47078218, Length=209, Percent_Identity=30.1435406698565, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI21536376, Length=220, Percent_Identity=30, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI105990541, Length=214, Percent_Identity=28.5046728971963, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI27436953, Length=209, Percent_Identity=26.7942583732057, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI153792144, Length=243, Percent_Identity=26.3374485596708, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI31657092, Length=226, Percent_Identity=29.2035398230088, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI6005701, Length=226, Percent_Identity=26.1061946902655, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI27477115, Length=226, Percent_Identity=26.5486725663717, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI116734710, Length=209, Percent_Identity=28.2296650717703, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI150417984, Length=202, Percent_Identity=26.2376237623762, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI27262624, Length=210, Percent_Identity=23.8095238095238, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27262626, Length=210, Percent_Identity=23.8095238095238, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI21536378, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI9665248, Length=257, Percent_Identity=23.7354085603113, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9955963, Length=233, Percent_Identity=27.0386266094421, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9961252, Length=230, Percent_Identity=27.3913043478261, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI4505771, Length=230, Percent_Identity=27.3913043478261, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI48994943, Length=221, Percent_Identity=29.8642533936652, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI87081782, Length=220, Percent_Identity=32.2727272727273, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786319, Length=212, Percent_Identity=31.6037735849057, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787029, Length=228, Percent_Identity=29.3859649122807, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1789672, Length=226, Percent_Identity=30.5309734513274, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786253, Length=222, Percent_Identity=27.027027027027, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1789890, Length=228, Percent_Identity=27.6315789473684, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1787759, Length=243, Percent_Identity=26.7489711934156, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787089, Length=226, Percent_Identity=26.5486725663717, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788450, Length=218, Percent_Identity=25.2293577981651, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786803, Length=215, Percent_Identity=23.7209302325581, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788506, Length=212, Percent_Identity=29.2452830188679, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1787792, Length=242, Percent_Identity=28.5123966942149, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1788761, Length=214, Percent_Identity=26.1682242990654, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081709, Length=220, Percent_Identity=24.5454545454545, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=26.4840182648402, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=25.5506607929515, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87081834, Length=202, Percent_Identity=28.7128712871287, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI48995001, Length=212, Percent_Identity=30.188679245283, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1786398, Length=252, Percent_Identity=25, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI48994997, Length=235, Percent_Identity=24.6808510638298, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1789593, Length=225, Percent_Identity=25.3333333333333, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788225, Length=231, Percent_Identity=25.5411255411255, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787105, Length=224, Percent_Identity=27.6785714285714, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788540, Length=179, Percent_Identity=31.2849162011173, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786872, Length=232, Percent_Identity=29.3103448275862, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790739, Length=230, Percent_Identity=23.4782608695652, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787548, Length=227, Percent_Identity=25.5506607929515, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789962, Length=217, Percent_Identity=27.1889400921659, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787547, Length=250, Percent_Identity=25.2, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1789586, Length=218, Percent_Identity=25.6880733944954, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787758, Length=210, Percent_Identity=23.8095238095238, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787112, Length=231, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786345, Length=227, Percent_Identity=23.3480176211454, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790544, Length=237, Percent_Identity=21.9409282700422, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786698, Length=190, Percent_Identity=26.8421052631579, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790525, Length=219, Percent_Identity=26.027397260274, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790190, Length=232, Percent_Identity=25.8620689655172, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790467, Length=222, Percent_Identity=26.1261261261261, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786975, Length=217, Percent_Identity=27.6497695852535, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=27.6595744680851, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787712, Length=210, Percent_Identity=23.3333333333333, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787143, Length=258, Percent_Identity=25.1937984496124, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789891, Length=223, Percent_Identity=24.2152466367713, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790162, Length=244, Percent_Identity=22.1311475409836, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788897, Length=206, Percent_Identity=25.7281553398058, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788472, Length=221, Percent_Identity=25.7918552036199, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082268, Length=228, Percent_Identity=20.6140350877193, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789864, Length=232, Percent_Identity=21.551724137931, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87082267, Length=210, Percent_Identity=24.7619047619048, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1787370, Length=206, Percent_Identity=22.8155339805825, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786654, Length=225, Percent_Identity=23.5555555555556, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI48994883, Length=222, Percent_Identity=23.8738738738739, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=225, Percent_Identity=28.4444444444444, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71983516, Length=212, Percent_Identity=30.188679245283, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71983510, Length=212, Percent_Identity=30.188679245283, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71983523, Length=212, Percent_Identity=30.188679245283, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17565586, Length=214, Percent_Identity=28.5046728971963, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI115533608, Length=207, Percent_Identity=28.5024154589372, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI193202878, Length=189, Percent_Identity=26.4550264550265, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193208177, Length=213, Percent_Identity=28.169014084507, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323959, Length=217, Percent_Identity=29.0322580645161, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24666092, Length=200, Percent_Identity=29.5, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI221512771, Length=231, Percent_Identity=29.4372294372294, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24582014, Length=238, Percent_Identity=26.4705882352941, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24582012, Length=238, Percent_Identity=26.4705882352941, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24650855, Length=208, Percent_Identity=26.9230769230769, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24650853, Length=208, Percent_Identity=26.9230769230769, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI116007328, Length=204, Percent_Identity=30.3921568627451, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28574150, Length=204, Percent_Identity=30.3921568627451, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI85725262, Length=211, Percent_Identity=27.4881516587678, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI281362751, Length=213, Percent_Identity=27.2300469483568, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24643674, Length=239, Percent_Identity=25.9414225941423, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI221500365, Length=204, Percent_Identity=24.0196078431373, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI116007184, Length=204, Percent_Identity=24.0196078431373, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573571, Length=230, Percent_Identity=24.7826086956522, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28573573, Length=222, Percent_Identity=25.2252252252252, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24648314, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28574744, Length=202, Percent_Identity=24.2574257425743, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221500419, Length=209, Percent_Identity=24.4019138755981, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281363262, Length=214, Percent_Identity=27.1028037383178, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24653245, Length=214, Percent_Identity=27.1028037383178, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21357907, Length=232, Percent_Identity=28.0172413793103, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI85726357, Length=211, Percent_Identity=25.1184834123223, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 33287; Mature: 33287

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIF
CCCHHHHHHHHHHHHECCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE
GKDNKKAEKEIKQNIGFVYDENHYYEDLTCEQMKRIIAPLYKKWDEEQYQSYMHRLQVPK
ECCCHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
YKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPVVRSELLDMLQEIVMEDEVSV
HHHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH
LFSTHITTDLERIADYITFINDGEIIFTGEKEELMENYVIVKGSNDLLDREGKELFVGLR
HHHHHHHHHHHHHHHHHHEECCCCEEEECCHHHHHHCEEEEECCCHHHCCCCCEEEEEEC
KNKFGFEGLANDKQAIIDWFGNEVVLEKPTLDDIIVYTAKGRGAYASARI
CCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLELKNVCKSYEDFAVKNISFTLPRGYIMGFVGPNGAGKSTTIKMIMNLIKKDSGEIKIF
CCCHHHHHHHHHHHHECCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE
GKDNKKAEKEIKQNIGFVYDENHYYEDLTCEQMKRIIAPLYKKWDEEQYQSYMHRLQVPK
ECCCHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
YKKIKELSKGMKMKFAIAIALSHHAEFIIMDEPTAGLDPVVRSELLDMLQEIVMEDEVSV
HHHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH
LFSTHITTDLERIADYITFINDGEIIFTGEKEELMENYVIVKGSNDLLDREGKELFVGLR
HHHHHHHHHHHHHHHHHHEECCCCEEEECCHHHHHHCEEEEECCCHHHCCCCCEEEEEEC
KNKFGFEGLANDKQAIIDWFGNEVVLEKPTLDDIIVYTAKGRGAYASARI
CCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]