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The map label for this gene is ytcJ [H]

Identifier: 49480701

GI number: 49480701

Start: 4439504

End: 4441072

Strand: Reverse

Name: ytcJ [H]

Synonym: BT9727_4377

Alternate gene names: 49480701

Gene position: 4441072-4439504 (Counterclockwise)

Preceding gene: 49478808

Following gene: 49481386

Centisome position: 84.79

GC content: 39.64

Gene sequence:

>1569_bases
ATGGGGGAAATTTGGTATGGCGGCAACATTTACACGATGAGGGAAGAAAATGAAAAAGTAGAAGCTATTTATGTTGAAAA
TGGCAGGATCATTGATAATGGAAGGAAAGAAGAGTTAGAAAACCGATATGCTGTGGCTAAATTGCACGATTTAAAAGGCA
AAACGATGATTCCAGGCCTCGTTGATAGCCATATGCATCTTATTGGTCACGGGGAGAGATTACTTCGTTTAGATTTATCA
AATTGCACATCTTATAGCGAAGTGCTGACTCTCGTTCGGAGGCGAGTAGAAGAAGCGCCGAAAGGTTCTTGGATTATCGG
AGAGGGCTGGAATGAAAATAACTTTAAGGATACGAAAGATGTTCACGCAAAAGATTTAGATGCAATTTCAAGAGAACATC
CCATTTTATTAAAGCGCGTTTGTCGCCATGTTACATGGGTGAACTCATACATACTGCAAGAAGCGAACATAACAGAAAAG
GCAGAAGATCCAAAAGGCGGGAAAGTTGGACGGGACTCATTCAATAAATTAACAGGACTTTTATATGAACAAGGCCAAGA
GTTAATCAAACATGTCCAGCCTGAAATTGATGAATCCTACTTACAAAGAGCTTTGCAAACAGCAATTAAAGACTGCTGGC
AATATGGACTCGTTGGCGGGCATACGGAAGATTTAAATTATTACGGTGGATTTAGAAAAACGCATAATGCGTTTTCTCAT
GTTATAAAAGAAATGCCATTTAAAGCACATTTACTCGTTCACCATGAAGTAGCACATGAACGAAAAGAATATGAAAATGA
GCATTATATTGAGTTTGGGGCAATGAAAATTTTTTCTGACGGTTCTTTTGGCGGAAGAACAGCTTTATTAAGTGAACCGT
ATGAAGATGCGAGAGAAACAAATGGAGTTGCCATTTTCTCACGTGAAGAGCTTGCGGAGTTAGTGAAAAAAGCACGAGAC
TTACATATGCCAGTTGCCATTCATACAATTGGTGATTTGTCACTCCAGTATGTGATTGATGCGCTTGAATTGTATCCGCC
AGCAAAAGGATTACGCGACCGCATTATTCATTGCCAGCTTGCTCGTGAAGAGTTGATTGAAAGAATGAAAAACTTGCAAG
TTATTATTGATATACAACCAGTCTTTGTTTCATCGGATTTTCCATCAGTCATTGAAAAACTGGGCGAGCAACGTCTTCGT
TATGCGTACGCTTGGAAGACGTTACTGGAAGCGGGATTACACTGTAACGGGGGATCTGATGCTCCGATCGAGCAAGTGAA
TCCGTTTCTAGGCATATATAGCGCTGTTACACGTAGAAGTTTTATTGACGGTTTATGTTATATGCCAGAAGAAAGATTAA
CGGTATATGAGGCTGTTTCTTTATTTACAACAGGAAGTGCCTATGCAATTGGAAAAGAAGCGAAGCGAGGGCAAATTACA
AAAGGATATGAGGCAGACTTTACAATATTAGACCGCGATATTTTTGAAATAGAGGCAGAAGAAATAAAAGAAGTACAGGC
AGAAATGACCGTAATAGATGGCCAAGTCGTCTATAGAAAAGGTGCGTAA

Upstream 100 bases:

>100_bases
AGTTACGACGTCTACTACTGAACAAAAGTAATGTTTAGAAAAGCACCATGTTTTGAAATGGTGCTTTTTTTTATACAATA
AAACAAAGGAGATGAAATAT

Downstream 100 bases:

>100_bases
AAATATATCAGCCATTATTAAAATATATCGACTTACCGACAAAAATTGACAAGAATATTGCCCGGATAGTGAGAGATTGT
TGTCGGGGTAAATAAATAAC

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MGEIWYGGNIYTMREENEKVEAIYVENGRIIDNGRKEELENRYAVAKLHDLKGKTMIPGLVDSHMHLIGHGERLLRLDLS
NCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKDVHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEK
AEDPKGGKVGRDSFNKLTGLLYEQGQELIKHVQPEIDESYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDARETNGVAIFSREELAELVKKARD
LHMPVAIHTIGDLSLQYVIDALELYPPAKGLRDRIIHCQLAREELIERMKNLQVIIDIQPVFVSSDFPSVIEKLGEQRLR
YAYAWKTLLEAGLHCNGGSDAPIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKGA

Sequences:

>Translated_522_residues
MGEIWYGGNIYTMREENEKVEAIYVENGRIIDNGRKEELENRYAVAKLHDLKGKTMIPGLVDSHMHLIGHGERLLRLDLS
NCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKDVHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEK
AEDPKGGKVGRDSFNKLTGLLYEQGQELIKHVQPEIDESYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDARETNGVAIFSREELAELVKKARD
LHMPVAIHTIGDLSLQYVIDALELYPPAKGLRDRIIHCQLAREELIERMKNLQVIIDIQPVFVSSDFPSVIEKLGEQRLR
YAYAWKTLLEAGLHCNGGSDAPIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKGA
>Mature_521_residues
GEIWYGGNIYTMREENEKVEAIYVENGRIIDNGRKEELENRYAVAKLHDLKGKTMIPGLVDSHMHLIGHGERLLRLDLSN
CTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKDVHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEKA
EDPKGGKVGRDSFNKLTGLLYEQGQELIKHVQPEIDESYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSHV
IKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDARETNGVAIFSREELAELVKKARDL
HMPVAIHTIGDLSLQYVIDALELYPPAKGLRDRIIHCQLAREELIERMKNLQVIIDIQPVFVSSDFPSVIEKLGEQRLRY
AYAWKTLLEAGLHCNGGSDAPIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQITK
GYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKGA

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 59547; Mature: 59416

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEIWYGGNIYTMREENEKVEAIYVENGRIIDNGRKEELENRYAVAKLHDLKGKTMIPGL
CCCEEECCEEEEECCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCEECCCH
VDSHMHLIGHGERLLRLDLSNCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKD
HHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHH
VHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEKAEDPKGGKVGRDSFNKLTGL
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
LYEQGQELIKHVQPEIDESYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDARET
HHHHCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEECCCCHHHHHHC
NGVAIFSREELAELVKKARDLHMPVAIHTIGDLSLQYVIDALELYPPAKGLRDRIIHCQL
CCEEEECHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AREELIERMKNLQVIIDIQPVFVSSDFPSVIEKLGEQRLRYAYAWKTLLEAGLHCNGGSD
HHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
CCHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKGA
CCCCCCEEEECCHHHHCCHHHHHHHHHHHEEECCEEEEECCC
>Mature Secondary Structure 
GEIWYGGNIYTMREENEKVEAIYVENGRIIDNGRKEELENRYAVAKLHDLKGKTMIPGL
CCEEECCEEEEECCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCEECCCH
VDSHMHLIGHGERLLRLDLSNCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKD
HHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHH
VHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEKAEDPKGGKVGRDSFNKLTGL
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
LYEQGQELIKHVQPEIDESYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDARET
HHHHCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEECCCCHHHHHHC
NGVAIFSREELAELVKKARDLHMPVAIHTIGDLSLQYVIDALELYPPAKGLRDRIIHCQL
CCEEEECHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AREELIERMKNLQVIIDIQPVFVSSDFPSVIEKLGEQRLRYAYAWKTLLEAGLHCNGGSD
HHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
CCHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKGA
CCCCCCEEEECCHHHHCCHHHHHHHHHHHEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]