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The map label for this gene is rng [H]

Identifier: 49480672

GI number: 49480672

Start: 4241710

End: 4243098

Strand: Reverse

Name: rng [H]

Synonym: BT9727_4179

Alternate gene names: 49480672

Gene position: 4243098-4241710 (Counterclockwise)

Preceding gene: 49478636

Following gene: 49481539

Centisome position: 81.01

GC content: 35.21

Gene sequence:

>1389_bases
TTGAAAACGTTATATATGAACTACGCTGGATCGGAAAAACGCGTTGCAATTGAAGAGAATAAGAAAATTGTTGAGTTTTT
ATGGAAACGAAATGAAGAACAAGAGATTGTTGGGCATATTTATATTGGACGTATCGTAAGAACGATTGCTGGAATGAACG
CAGCTTTTGTAAATATCGGTTTAGAAAAACATGCGTATCTTTCGTACGATGATGTACCATCTTCTTATCGAATACATGAA
GGACAAGCGGTACTCGTACAAGTTGTAAAAGAGGCAATTGATACGAAAGGGCCGAAATTGACAGCAAATATAGAATTTAC
CGGGAAATATGTCGTTTATATGCCATATGATGAAATGCGTGCGGTTTCTCGGAAAATAAAAAACAATAAAAGAAGGCAAC
AACTACTCCAAATTGAAGTAGAAGGGACAGGAGGTTATATTTTTCGCTCTGCTTCTGAAAAAGGAAAGATTGAAGAAATA
CAAGCTGAAATGCAAAGGTTACAGCAGTTATATGAAGAGTTAAAAAGAAAAGAGGGCCAAGGAAAGGCCCCGTTACTACT
TCATCGACCGGCAACCTTTTTAGATCGTGTATTTCAAGAAAATCCAATTGAAACAATTGAAAAAGTAATTGTAGATACAA
GAAGTATAGTAAAAGAATTAGAAGAAAAAGTTGGTAAAGAAAAAGTGTCCTTTTATAATGAAAAATCTTCAATGTTTAAC
CATTTTGGAATAGAGCGTGAAATTGAGAAAGCACTTCAAAAAATTGTGTGGCTCCCGAATGGCGCTTATTTAATTGTGGA
GCAAATGGAGACGATGACTGTAATTGATGTGAATACTGGCAAGTTTACTGGCAAACAGAATTTACAAGATACAGTCCTTC
GTACAAATGAAGTGGCAGCTGAAGAGATAGCGCGTCAATTAAGACTGCGTGATATCGGTGGTATGATATTAATTGATTTT
ATTAATATGAAAAGAAGAGAAGATAAAGAAAAGGTAAGAGAATGTCTCGTGGCTGCTATGCAAAATGATCGTACATATAC
AAGGGTACTCGGGTTTACAGAGTTAGGGATTTTAGAGATGACACGTAAACGTAAGAAACATTCTTTACGCGACGTATTAC
TAGAAGAGTGTGCACCGTGCAAAGCGACGGGGTATGTAATGTCATATGAAACAATTGCGTATGAGCTAGAGAGAGAGCTA
ATTACATATGGCAATATAGAAGATGAGGCAGTATTAATCTCTGCACCTAAAGAACTGCAAAAACAATTTTCGCAAAAAGA
ATTACAAAAAAATATTCCATTTGAAATTTATTTCAAAGATGATATGATCGAAAAGTATGCAATTATCCGTTTTGGAAGTA
AAACAGAAATTGTAGAACGGAAAAAATAG

Upstream 100 bases:

>100_bases
ACAACTTCATCTGTTGAAGAATTAATCGGTTAGTGTTGACGTTAGCACTAACCTTTTATTATTGTAAAAGCAAAGAAGAT
TATAAAGTGAGGAAAGAATT

Downstream 100 bases:

>100_bases
TTAGTAGAACTTTCATTGACAACCGTCTATGATTCATGATAACATCTTTATGTTATAGTTTATAGCACCTAAACGGCTAT
ATGCTACAACCGCACAAGAC

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYIGRIVRTIAGMNAAFVNIGLEKHAYLSYDDVPSSYRIHE
GQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGKIEEI
QAEMQRLQQLYEELKRKEGQGKAPLLLHRPATFLDRVFQENPIETIEKVIVDTRSIVKELEEKVGKEKVSFYNEKSSMFN
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNEVAAEEIARQLRLRDIGGMILIDF
INMKRREDKEKVRECLVAAMQNDRTYTRVLGFTELGILEMTRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELEREL
ITYGNIEDEAVLISAPKELQKQFSQKELQKNIPFEIYFKDDMIEKYAIIRFGSKTEIVERKK

Sequences:

>Translated_462_residues
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYIGRIVRTIAGMNAAFVNIGLEKHAYLSYDDVPSSYRIHE
GQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGKIEEI
QAEMQRLQQLYEELKRKEGQGKAPLLLHRPATFLDRVFQENPIETIEKVIVDTRSIVKELEEKVGKEKVSFYNEKSSMFN
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNEVAAEEIARQLRLRDIGGMILIDF
INMKRREDKEKVRECLVAAMQNDRTYTRVLGFTELGILEMTRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELEREL
ITYGNIEDEAVLISAPKELQKQFSQKELQKNIPFEIYFKDDMIEKYAIIRFGSKTEIVERKK
>Mature_462_residues
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYIGRIVRTIAGMNAAFVNIGLEKHAYLSYDDVPSSYRIHE
GQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGKIEEI
QAEMQRLQQLYEELKRKEGQGKAPLLLHRPATFLDRVFQENPIETIEKVIVDTRSIVKELEEKVGKEKVSFYNEKSSMFN
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNEVAAEEIARQLRLRDIGGMILIDF
INMKRREDKEKVRECLVAAMQNDRTYTRVLGFTELGILEMTRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELEREL
ITYGNIEDEAVLISAPKELQKQFSQKELQKNIPFEIYFKDDMIEKYAIIRFGSKTEIVERKK

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=425, Percent_Identity=35.2941176470588, Blast_Score=242, Evalue=3e-65,
Organism=Escherichia coli, GI1787325, Length=425, Percent_Identity=29.6470588235294, Blast_Score=206, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 53727; Mature: 53727

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYIGRIVRTIAGMNAAFVNIG
CCEEEEECCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
LEKHAYLSYDDVPSSYRIHEGQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMR
CCCCEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEEEECEEEEEECHHHHH
AVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGKIEEIQAEMQRLQQLYEELKRKEGQ
HHHHHHHCCHHHHEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GKAPLLLHRPATFLDRVFQENPIETIEKVIVDTRSIVKELEEKVGKEKVSFYNEKSSMFN
CCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNEVAA
HCCCHHHHHHHHHHHEECCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
EEIARQLRLRDIGGMILIDFINMKRREDKEKVRECLVAAMQNDRTYTRVLGFTELGILEM
HHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHH
TRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELERELITYGNIEDEAVLISAPKELQ
HHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
KQFSQKELQKNIPFEIYFKDDMIEKYAIIRFGSKTEIVERKK
HHHHHHHHHHCCCEEEEECCHHHHHHHEEEECCCCCHHCCCC
>Mature Secondary Structure
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYIGRIVRTIAGMNAAFVNIG
CCEEEEECCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
LEKHAYLSYDDVPSSYRIHEGQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMR
CCCCEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEEEECEEEEEECHHHHH
AVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGKIEEIQAEMQRLQQLYEELKRKEGQ
HHHHHHHCCHHHHEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GKAPLLLHRPATFLDRVFQENPIETIEKVIVDTRSIVKELEEKVGKEKVSFYNEKSSMFN
CCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNEVAA
HCCCHHHHHHHHHHHEECCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
EEIARQLRLRDIGGMILIDFINMKRREDKEKVRECLVAAMQNDRTYTRVLGFTELGILEM
HHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHH
TRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELERELITYGNIEDEAVLISAPKELQ
HHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
KQFSQKELQKNIPFEIYFKDDMIEKYAIIRFGSKTEIVERKK
HHHHHHHHHHCCCEEEEECCHHHHHHHEEEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]