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The map label for this gene is yjdF [H]

Identifier: 49480618

GI number: 49480618

Start: 3979258

End: 3979704

Strand: Reverse

Name: yjdF [H]

Synonym: BT9727_3900

Alternate gene names: 49480618

Gene position: 3979704-3979258 (Counterclockwise)

Preceding gene: 49480915

Following gene: 49478841

Centisome position: 75.98

GC content: 36.47

Gene sequence:

>447_bases
ATGTCCCGTATTTCTAATTTTTTAAAGGAGGGGCTGTCAATGGATTTGACAGTATATCACGATGGTCAATTTTTTGTAGG
AATTATTACATGTAAAGAAAAAGGGAAGTTGTATGGAGCAAGGTATATCTTTGGAACGGAACCTTCAGATGAAGAAGTGC
TTATCTTTGTGAACGGTTCAATGTTAGCGTATTTTCAGCATTTTGCAAAATGTGGCGTGGAAGTGCAAGAAAAACAGCGT
CCCCAAAATATAAAGCGTATCATACGACAAGCAGCAAAAGAAGTAAATGTAAACTGCTTTACTAAGGCGCAAGAGGCAAT
TAGCTTATCCTATGAACTGCATAAACAAGAAAAGAAAGTGCAATCTAAGGAGAAGCGAGAGACTGAAAAACAAAGAAGAC
GTTTAATCAAAGTACAAAAAGCAAAGCAAAAACATCGTGGTCATTAA

Upstream 100 bases:

>100_bases
TGGAAAAAAAGATATAATAATAGTGAAAGAAATACAAAAACACAGTACTGGTTGGTAGTCCAGACGCATGATTTCATGTC
AGTAACCTTCCCCCTCCGGG

Downstream 100 bases:

>100_bases
GAAAAGGTGTTAGAGCAGGGCTCTAACACCTTTTCTATATCCAAATACAAGTAAACTTACTTGTATTTCATAAACATTAA
CTGGTAAGATACAAATAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSRISNFLKEGLSMDLTVYHDGQFFVGIITCKEKGKLYGARYIFGTEPSDEEVLIFVNGSMLAYFQHFAKCGVEVQEKQR
PQNIKRIIRQAAKEVNVNCFTKAQEAISLSYELHKQEKKVQSKEKRETEKQRRRLIKVQKAKQKHRGH

Sequences:

>Translated_148_residues
MSRISNFLKEGLSMDLTVYHDGQFFVGIITCKEKGKLYGARYIFGTEPSDEEVLIFVNGSMLAYFQHFAKCGVEVQEKQR
PQNIKRIIRQAAKEVNVNCFTKAQEAISLSYELHKQEKKVQSKEKRETEKQRRRLIKVQKAKQKHRGH
>Mature_147_residues
SRISNFLKEGLSMDLTVYHDGQFFVGIITCKEKGKLYGARYIFGTEPSDEEVLIFVNGSMLAYFQHFAKCGVEVQEKQRP
QNIKRIIRQAAKEVNVNCFTKAQEAISLSYELHKQEKKVQSKEKRETEKQRRRLIKVQKAKQKHRGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016787 [H]

Pfam domain/function: PF11208 DUF2992 [H]

EC number: NA

Molecular weight: Translated: 17278; Mature: 17147

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRISNFLKEGLSMDLTVYHDGQFFVGIITCKEKGKLYGARYIFGTEPSDEEVLIFVNGS
CHHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCC
MLAYFQHFAKCGVEVQEKQRPQNIKRIIRQAAKEVNVNCFTKAQEAISLSYELHKQEKKV
HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QSKEKRETEKQRRRLIKVQKAKQKHRGH
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRISNFLKEGLSMDLTVYHDGQFFVGIITCKEKGKLYGARYIFGTEPSDEEVLIFVNGS
HHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCC
MLAYFQHFAKCGVEVQEKQRPQNIKRIIRQAAKEVNVNCFTKAQEAISLSYELHKQEKKV
HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QSKEKRETEKQRRRLIKVQKAKQKHRGH
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]