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The map label for this gene is yknZ [H]

Identifier: 49480397

GI number: 49480397

Start: 4988967

End: 4990166

Strand: Reverse

Name: yknZ [H]

Synonym: BT9727_4935

Alternate gene names: 49480397

Gene position: 4990166-4988967 (Counterclockwise)

Preceding gene: 49481229

Following gene: 49478931

Centisome position: 95.27

GC content: 37.0

Gene sequence:

>1200_bases
ATGAGTTTACTAGATAGTATAAAAATTGCCCTCTCTTCTATTTTAGCTCATAAACTGCGTTCAGCCCTTACAATGCTCGG
TATTATTATCGGCGTTGGTTCGATTATTACTGTCGTTGCAATTGGGCAAGGCGGGGAAGCGATGCTGAAGTCAAAAATCG
CAGGTTCTGGTAATAATCTTATGCCAATTCAGTTTAAACCAGATATTAATGATGAGTTTGCTATAGGTGGATTTGAAATA
CCGAAGTTAACGGAAGAAGATATTATGGAAGTAAAACAAGTGAGAGATGTTTCACATGTTATTACGACAAACCAGACGAC
AGAGGTGCTTGATGTAAATGATAAAAAGGCAAATCTGAATGTTATTGGTCTTGATAATGAATATTTTGCAGTTAATAAAG
TAAAGGTCGTAAAGGGACGTACTTTAAACGAATCAGATATTTCTCATGCAAATAACGTTGTAATGATTAGTACAAAGACA
GAGGAAACGTTATTTAAGGACGTGAATCCAATCGGACAAATTATTGAGATGAAAGGACAACCGATGCAAATTATCGGTGT
GTATACATCTGATAATGAGTTTATGGGATTTGAAATGGAAGAAGGGTTAATTCCGATTACGTTATGGCCTGTTTTATACG
GAACAGATGAAATTCAAAGTATCGCAATTCAATCTAAAAATGTAGACGATTTAGAATCAGCAGGGAAACAAGCTGTTGAT
GTACTAAATAGTCGTAAGCCAAGTGAAATTCCAGGTAAATATGAATTAGTAAACTTGAAAGAATTCCAAGAAGGAGTTTC
TAAAGTTACTAACATTATGACGATGATCATTGGCGGTATCGCGGGTATTTCACTAGTCGTTGGTGGTATTGGTGTTATGA
ACATTATGCTCGTATCTGTAACGGAGCGTACACGCGAAATTGGGATACGTAAAGCACTTGGAGCAACGCGTAGTAAAATT
TTATTACAGTTTTTAATTGAAGCAGTTATGTTAACGCTTCTAGGTGGTTTGATCGGAATTGGTCTTGGATATGGCGGAGC
ATATATCGTTTCCACATTCGCAAAATGGCCACCACTCGTTTCATGGGAAGTTGTCGTTGGAGGCGTACTGTTCTCTATGA
CACTCGGTATTATTTTTGGATTAATTCCAGCAAACAAAGCTGCGAAATTAGATCCAATTGAAGCACTTCGTTATGAGTAA

Upstream 100 bases:

>100_bases
CAATTGTTATGGTTACGCATGAAGAGGAAGTAGCAGCGTATTCTTCCCGCCGTATTGTACTGCGAGATGGGAAAATTACA
GAAGATAGAAGGTGTGCGGT

Downstream 100 bases:

>100_bases
GTAATCGTGTAGTAGAACTACACACTACCGTTCTAGTGGGCGGTTCATAGCCTCTATATGAGGAAGTGAACCGCCCGTTA
GAACGGGTTATATAAATGGA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKIAGSGNNLMPIQFKPDINDEFAIGGFEI
PKLTEEDIMEVKQVRDVSHVITTNQTTEVLDVNDKKANLNVIGLDNEYFAVNKVKVVKGRTLNESDISHANNVVMISTKT
EETLFKDVNPIGQIIEMKGQPMQIIGVYTSDNEFMGFEMEEGLIPITLWPVLYGTDEIQSIAIQSKNVDDLESAGKQAVD
VLNSRKPSEIPGKYELVNLKEFQEGVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGIRKALGATRSKI
LLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE

Sequences:

>Translated_399_residues
MSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKIAGSGNNLMPIQFKPDINDEFAIGGFEI
PKLTEEDIMEVKQVRDVSHVITTNQTTEVLDVNDKKANLNVIGLDNEYFAVNKVKVVKGRTLNESDISHANNVVMISTKT
EETLFKDVNPIGQIIEMKGQPMQIIGVYTSDNEFMGFEMEEGLIPITLWPVLYGTDEIQSIAIQSKNVDDLESAGKQAVD
VLNSRKPSEIPGKYELVNLKEFQEGVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGIRKALGATRSKI
LLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
>Mature_398_residues
SLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKIAGSGNNLMPIQFKPDINDEFAIGGFEIP
KLTEEDIMEVKQVRDVSHVITTNQTTEVLDVNDKKANLNVIGLDNEYFAVNKVKVVKGRTLNESDISHANNVVMISTKTE
ETLFKDVNPIGQIIEMKGQPMQIIGVYTSDNEFMGFEMEEGLIPITLWPVLYGTDEIQSIAIQSKNVDDLESAGKQAVDV
LNSRKPSEIPGKYELVNLKEFQEGVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGIRKALGATRSKIL
LQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=410, Percent_Identity=32.1951219512195, Blast_Score=170, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43104; Mature: 42973

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKIAGSGNNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCE
MPIQFKPDINDEFAIGGFEIPKLTEEDIMEVKQVRDVSHVITTNQTTEVLDVNDKKANLN
EEEEECCCCCCCEEECCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEE
VIGLDNEYFAVNKVKVVKGRTLNESDISHANNVVMISTKTEETLFKDVNPIGQIIEMKGQ
EEECCCCEEEEEEEEEEECCCCCHHHHCCCCCEEEEEECCHHHHHHHCCHHHHHHHCCCC
PMQIIGVYTSDNEFMGFEMEEGLIPITLWPVLYGTDEIQSIAIQSKNVDDLESAGKQAVD
CEEEEEEEECCCCEECEECCCCEEEEEEHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHH
VLNSRKPSEIPGKYELVNLKEFQEGVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSV
HHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TERTREIGIRKALGATRSKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE
SWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
EHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
SLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKIAGSGNNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCE
MPIQFKPDINDEFAIGGFEIPKLTEEDIMEVKQVRDVSHVITTNQTTEVLDVNDKKANLN
EEEEECCCCCCCEEECCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEE
VIGLDNEYFAVNKVKVVKGRTLNESDISHANNVVMISTKTEETLFKDVNPIGQIIEMKGQ
EEECCCCEEEEEEEEEEECCCCCHHHHCCCCCEEEEEECCHHHHHHHCCHHHHHHHCCCC
PMQIIGVYTSDNEFMGFEMEEGLIPITLWPVLYGTDEIQSIAIQSKNVDDLESAGKQAVD
CEEEEEEEECCCCEECEECCCCEEEEEEHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHH
VLNSRKPSEIPGKYELVNLKEFQEGVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSV
HHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TERTREIGIRKALGATRSKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE
SWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
EHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]