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The map label for this gene is spoIIGA

Identifier: 49479095

GI number: 49479095

Start: 3744467

End: 3745393

Strand: Reverse

Name: spoIIGA

Synonym: BT9727_3647

Alternate gene names: NA

Gene position: 3745393-3744467 (Counterclockwise)

Preceding gene: 49478443

Following gene: 49478442

Centisome position: 71.51

GC content: 33.76

Gene sequence:

>927_bases
GTGAATTGTTTGGTTGTTTACGCCGACGTTGTTTGGTTGTTAAACGCCTGCATTGATTTTCTTTTACTTTTATTAACAGC
TACCGTATTAAAAAAGAAGATCAAAAGATGGAGGCTTGTGTTAGGGGCATTTATAGGTTCAACCATTGTTATTTTTGCCT
TTACTCCTTTTGCTTCTATGATGACACATCCGATTATGAAACTACTGTACTCGTTACTTATCGTGTATACAGCATTTGGG
TTTACAACATTTAGAAATTATACACAAACTGTTTTTACTTTTTACTTTGTAACCTTTATGGTTGGCGGAGGATTAATGGG
CACTCATTTCTTTTTGCAAACGAATGAAATGGTAAATGGGTTGGTTCAATCTCAATCAATTTCTTACGGTGACCCAATTA
GTTGGTTGTTCGTTATTTTTGGTTTTCCAGTCATTTATTATTTTTCTAAAAAGCGTATTGAAAGCGTAGAGGTTACAAAA
ATACACTATGATCAAATTGTGAAATTGAAAATTCAATTAGCTGAAGAGGAACTAGAACTCGCAGGTTTAATTGATAGTGG
GAATCAACTTTACGACCCGTTAACGAAAACACCTGTTATGATTATGCATATTTCATCATTAGAACATTGTTTGCCAGCTT
GGTTAACAGAACAAATTTATTCCAAAACAGAGATTCCTCAAATACCAGAAAATGATTCTGGGTGGGCGACAAAATTACGC
TTAATTCCTTTTCGAGCAGTAGGAGTAGAGAATCAATTTTTATGGGCAATTAAGCCAGAAAGTGTACAAATTTATCATGA
AGGTAGTTCTATTGTCGTGAATAAAGTATTGATTGGATTAAATACACAACAGTTGTCAACCAATGGAGAGTATCAATGTA
TTGTGCATCCAAAAATGTTGATTTCGCAAAAAATGGTAATTGCTTAA

Upstream 100 bases:

>100_bases
ATTATGTCTAGAAAGCACAAAATAACAAAAAAACACCTCCGCAAATTGACACACTTTCCTATTGGATATGCATTATACTA
GTCTCAACTTAAAAAAAGAG

Downstream 100 bases:

>100_bases
TAATGGGAGGCGGGATAATATGATGAAATTAAAATTTTATTTAGTATACCTTTGGTATAAAGTATTGTTGAAATTAGGAA
TTAAGACCGATGAAATTTAT

Product: sporulation sigma-E factor processing peptidase (stage II sporulation protein GA)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNCLVVYADVVWLLNACIDFLLLLLTATVLKKKIKRWRLVLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFG
FTTFRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVNGLVQSQSISYGDPISWLFVIFGFPVIYYFSKKRIESVEVTK
IHYDQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLR
LIPFRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIGLNTQQLSTNGEYQCIVHPKMLISQKMVIA

Sequences:

>Translated_308_residues
MNCLVVYADVVWLLNACIDFLLLLLTATVLKKKIKRWRLVLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFG
FTTFRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVNGLVQSQSISYGDPISWLFVIFGFPVIYYFSKKRIESVEVTK
IHYDQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLR
LIPFRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIGLNTQQLSTNGEYQCIVHPKMLISQKMVIA
>Mature_308_residues
MNCLVVYADVVWLLNACIDFLLLLLTATVLKKKIKRWRLVLGAFIGSTIVIFAFTPFASMMTHPIMKLLYSLLIVYTAFG
FTTFRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVNGLVQSQSISYGDPISWLFVIFGFPVIYYFSKKRIESVEVTK
IHYDQIVKLKIQLAEEELELAGLIDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLR
LIPFRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIGLNTQQLSTNGEYQCIVHPKMLISQKMVIA

Specific function: Probably activates the RNA polymerase sigma-35 factor at the stage II of sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005081 [H]

Pfam domain/function: PF03419 Peptidase_U4 [H]

EC number: NA

Molecular weight: Translated: 35093; Mature: 35093

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCLVVYADVVWLLNACIDFLLLLLTATVLKKKIKRWRLVLGAFIGSTIVIFAFTPFASM
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH
MTHPIMKLLYSLLIVYTAFGFTTFRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECHHHHHH
LVQSQSISYGDPISWLFVIFGFPVIYYFSKKRIESVEVTKIHYDQIVKLKIQLAEEELEL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHEEEHHEEHHHHHHHH
AGLIDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLR
HHEECCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
LIPFRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIGLNTQQLSTNGEYQCIVHPKML
EEEEEEECCCCCEEEEECCCCEEEEECCCEEEEEHHHEECCHHHCCCCCCEEEEECHHHH
ISQKMVIA
HCCHHHCC
>Mature Secondary Structure
MNCLVVYADVVWLLNACIDFLLLLLTATVLKKKIKRWRLVLGAFIGSTIVIFAFTPFASM
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH
MTHPIMKLLYSLLIVYTAFGFTTFRNYTQTVFTFYFVTFMVGGGLMGTHFFLQTNEMVNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECHHHHHH
LVQSQSISYGDPISWLFVIFGFPVIYYFSKKRIESVEVTKIHYDQIVKLKIQLAEEELEL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHEEEHHEEHHHHHHHH
AGLIDSGNQLYDPLTKTPVMIMHISSLEHCLPAWLTEQIYSKTEIPQIPENDSGWATKLR
HHEECCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
LIPFRAVGVENQFLWAIKPESVQIYHEGSSIVVNKVLIGLNTQQLSTNGEYQCIVHPKML
EEEEEEECCCCCEEEEECCCCEEEEECCCEEEEEHHHEECCHHHCCCCCCEEEEECHHHH
ISQKMVIA
HCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1904859 [H]