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The map label for this gene is wcaI [C]

Identifier: 49478942

GI number: 49478942

Start: 5007284

End: 5008549

Strand: Reverse

Name: wcaI [C]

Synonym: BT9727_4953

Alternate gene names: 49478942

Gene position: 5008549-5007284 (Counterclockwise)

Preceding gene: 49478943

Following gene: 49478941

Centisome position: 95.63

GC content: 29.7

Gene sequence:

>1266_bases
ATGAAATTAATAAGGAGAATGGATGGTAAGTATTATATGAAATTATTATATATTTCCCAATTTTATTATCCTGAGCGTGC
GGCTGCAGCATTTAGAGCTTATGAGAATTCTAAATATTGGGCTGGTGAAGGACATAATGTAACTATTTTTACTGGTAATC
CTAACTTTCCGACGGGAAATCTTTTTGCAGGATATGCCAATAAATTGATAGATGTTGAAACAAAAGAAGGTGTTAAAATT
ATTCGGAATAAAGTCTTTGCTAGGAAAAATACAAATATTTTTAACAGGTTAATTTGTTATTTAAGTTTTCCCTTTTTCGG
GACTTTAAATATGTTATTTAATCGTAAAAAAATTGGTCAAGATTATAATGTTATTTTAGCAACCACGGGTACAATCTTTG
CCCCATTTTTAGGTATATTGTATTCGAAGATACTAAAAAAACCATTAATAGTAGAATTTAGGGATATAACATACTCGCAA
ATGGTGGCCAATGGAAAATCAAAATCCAGTTTGGCTTACAAAATTGTTAGGAGAATTGAATTATTGTTTTGTAAGCATGC
AAAGCATATTGTAACAGTAACAAAAGGTTTTCAGAAGGAGTTAGTGCAAGAAGGGATTCCTAAAGAAAAAATCTCAGTAA
TATATAATGGGGTTAAAATTGAAGAGAATGATTATAAAACGGTGAAGGATCATTCTAAGCAAGAAGTTACTATTGGTTAT
TTTGGGGCGTTGGGAAAGTCCCAAAACTTACAATTTATTATAGATGTATTTAATAAGATACAGATTAGCGGTATGCAAGT
AAATATGGTGTTTATTGGCGATGGAGCAGAAAAAGAGACTCTTAATGAATATATTAAAAATAATAAAATCAGTAATATTA
AAATGATGGATAATATGGAAAAATCACAATTAGATACGTATTACGAAAAGTGTGATTTTCTTATTGTTTCTTTAAAAAAT
AATAAGGCTTTTAAAAACACAGTACCATCAAAAATATTTCATATAATGGGTAAGGCTAAGCCAATAATTTACTTTGGGCC
TATAGGTGAAGCGAGTAATATAATAGAAGAGGCAAAGAGTGGGGTTATTGTCAATACAGTAAAGGTAGAGGAAGCACAAA
AAATAGTTCATGATAGTCTGAAAAAAAATGTAGATGAAATTAAGAATATGGGTAGTGCTGGATACGAGTTTGTGAAAGTT
AAATTTGATAGGGAATACTTAGCTGAAAAGTATATAGAGATTATTAAAAAAGTTTCGTCTCAATAA

Upstream 100 bases:

>100_bases
TTATACGGTGATAAAATAAATATCTCAGATAACGGATCGATAATAAATATTAATACTATAGATACTTCATATGAGTATGA
TATAAAACTAGAAAAAATTT

Downstream 100 bases:

>100_bases
ATCTGTATAGAAGATAGGTGTAATTAGTTATATGAAAGTGCAGTTAATTCCTAAAAGTTATTTAATGGTTATAGTGACCC
TTATATTTTATTATTGGAAC

Product: glycosyl transferase

Products: NA

Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Capsular Polysaccharide Biosynthesis F; Glycosyl Transferase Group 1 Protein; WblI Protein; Lipopolysaccharide Biosynthesis Protein; LPS Biosynthesis Related Glycosyltransferase; Colanic Acid Biosynthesis Glycosyl Transferase WcaI; Glycosyltransferase Protein; A-Glycosyltransferase; Group Glycosyltransferase; Group 1 Family Glycosyltransferase; Group 1 Family Glycosyl Transferase; LPS Biosynthesis Rfbu Related Protein; Capsular Polysaccharide Synthesis Cap5L; Glycosyltransferase Group 1 Family; Glycosyltransferase Group 1 Protein; Glycosyltransferase-Like Protein; Lipopolysaccharide Biosynthesis Glycosyltransferase; Glycosyltransferase Family 4 Protein; Glycosyl Transferase Family Protein; Glycosyltransferase Group 1 Family Protein

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKLIRRMDGKYYMKLLYISQFYYPERAAAAFRAYENSKYWAGEGHNVTIFTGNPNFPTGNLFAGYANKLIDVETKEGVKI
IRNKVFARKNTNIFNRLICYLSFPFFGTLNMLFNRKKIGQDYNVILATTGTIFAPFLGILYSKILKKPLIVEFRDITYSQ
MVANGKSKSSLAYKIVRRIELLFCKHAKHIVTVTKGFQKELVQEGIPKEKISVIYNGVKIEENDYKTVKDHSKQEVTIGY
FGALGKSQNLQFIIDVFNKIQISGMQVNMVFIGDGAEKETLNEYIKNNKISNIKMMDNMEKSQLDTYYEKCDFLIVSLKN
NKAFKNTVPSKIFHIMGKAKPIIYFGPIGEASNIIEEAKSGVIVNTVKVEEAQKIVHDSLKKNVDEIKNMGSAGYEFVKV
KFDREYLAEKYIEIIKKVSSQ

Sequences:

>Translated_421_residues
MKLIRRMDGKYYMKLLYISQFYYPERAAAAFRAYENSKYWAGEGHNVTIFTGNPNFPTGNLFAGYANKLIDVETKEGVKI
IRNKVFARKNTNIFNRLICYLSFPFFGTLNMLFNRKKIGQDYNVILATTGTIFAPFLGILYSKILKKPLIVEFRDITYSQ
MVANGKSKSSLAYKIVRRIELLFCKHAKHIVTVTKGFQKELVQEGIPKEKISVIYNGVKIEENDYKTVKDHSKQEVTIGY
FGALGKSQNLQFIIDVFNKIQISGMQVNMVFIGDGAEKETLNEYIKNNKISNIKMMDNMEKSQLDTYYEKCDFLIVSLKN
NKAFKNTVPSKIFHIMGKAKPIIYFGPIGEASNIIEEAKSGVIVNTVKVEEAQKIVHDSLKKNVDEIKNMGSAGYEFVKV
KFDREYLAEKYIEIIKKVSSQ
>Mature_421_residues
MKLIRRMDGKYYMKLLYISQFYYPERAAAAFRAYENSKYWAGEGHNVTIFTGNPNFPTGNLFAGYANKLIDVETKEGVKI
IRNKVFARKNTNIFNRLICYLSFPFFGTLNMLFNRKKIGQDYNVILATTGTIFAPFLGILYSKILKKPLIVEFRDITYSQ
MVANGKSKSSLAYKIVRRIELLFCKHAKHIVTVTKGFQKELVQEGIPKEKISVIYNGVKIEENDYKTVKDHSKQEVTIGY
FGALGKSQNLQFIIDVFNKIQISGMQVNMVFIGDGAEKETLNEYIKNNKISNIKMMDNMEKSQLDTYYEKCDFLIVSLKN
NKAFKNTVPSKIFHIMGKAKPIIYFGPIGEASNIIEEAKSGVIVNTVKVEEAQKIVHDSLKKNVDEIKNMGSAGYEFVKV
KFDREYLAEKYIEIIKKVSSQ

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48251; Mature: 48251

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIRRMDGKYYMKLLYISQFYYPERAAAAFRAYENSKYWAGEGHNVTIFTGNPNFPTGN
CCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCCCC
LFAGYANKLIDVETKEGVKIIRNKVFARKNTNIFNRLICYLSFPFFGTLNMLFNRKKIGQ
EEHHHHCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
DYNVILATTGTIFAPFLGILYSKILKKPLIVEFRDITYSQMVANGKSKSSLAYKIVRRIE
CCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEHHCHHHHHHHCCCCCHHHHHHHHHHHH
LLFCKHAKHIVTVTKGFQKELVQEGIPKEKISVIYNGVKIEENDYKTVKDHSKQEVTIGY
HHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHEECCEEEECCCCHHHHCCCCCEEEEEE
FGALGKSQNLQFIIDVFNKIQISGMQVNMVFIGDGAEKETLNEYIKNNKISNIKMMDNME
EECCCCCCCHHHHEEHHHHEEECCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEHHHCCC
KSQLDTYYEKCDFLIVSLKNNKAFKNTVPSKIFHIMGKAKPIIYFGPIGEASNIIEEAKS
HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC
GVIVNTVKVEEAQKIVHDSLKKNVDEIKNMGSAGYEFVKVKFDREYLAEKYIEIIKKVSS
CEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHC
Q
C
>Mature Secondary Structure
MKLIRRMDGKYYMKLLYISQFYYPERAAAAFRAYENSKYWAGEGHNVTIFTGNPNFPTGN
CCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCCCC
LFAGYANKLIDVETKEGVKIIRNKVFARKNTNIFNRLICYLSFPFFGTLNMLFNRKKIGQ
EEHHHHCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
DYNVILATTGTIFAPFLGILYSKILKKPLIVEFRDITYSQMVANGKSKSSLAYKIVRRIE
CCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEHHCHHHHHHHCCCCCHHHHHHHHHHHH
LLFCKHAKHIVTVTKGFQKELVQEGIPKEKISVIYNGVKIEENDYKTVKDHSKQEVTIGY
HHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHEECCEEEECCCCHHHHCCCCCEEEEEE
FGALGKSQNLQFIIDVFNKIQISGMQVNMVFIGDGAEKETLNEYIKNNKISNIKMMDNME
EECCCCCCCHHHHEEHHHHEEECCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEHHHCCC
KSQLDTYYEKCDFLIVSLKNNKAFKNTVPSKIFHIMGKAKPIIYFGPIGEASNIIEEAKS
HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC
GVIVNTVKVEEAQKIVHDSLKKNVDEIKNMGSAGYEFVKVKFDREYLAEKYIEIIKKVSS
CEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA