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The map label for this gene is yknW [H]

Identifier: 49478930

GI number: 49478930

Start: 4987455

End: 4988135

Strand: Reverse

Name: yknW [H]

Synonym: BT9727_4933

Alternate gene names: 49478930

Gene position: 4988135-4987455 (Counterclockwise)

Preceding gene: 49478931

Following gene: 49481227

Centisome position: 95.24

GC content: 34.8

Gene sequence:

>681_bases
ATGGAAGCAAATATTAATACGCAAGATGCAGGTGGAAAGAAGCCGTCATTGTTTGGGATGATTACTTCTCCAGGTGAACA
GTTTGAGAGAATGAAGACGAAAAGTCCAGTTTGGGGAGGTTTTGTCTTATTTCTTGTAATGGGGACCATCTTTGCAACAG
TAGCAGCTTACTTAGGGTTAATTAATAATCCGGAAATGGCAAAGCTACTTAAAGAAGATACGACAGGGATAATGAAAGGA
ACTACACTTGGTATTGGAGCTATTGGAGGTCTAGTTGGAACAGCTTTTGGTCTTTTTATAGTAGCAGGATTTTATAAAAT
TATTATGATGTTTATGAGCAATGATACTCCATATATGAAGATATTATCTATTTATATTTATGCTAATGTTGTTTTTTACC
TTGGTAGTCTTATTAATGTAGCTTTAGGTTATATACTTGGTGGAAACGGCATTGATAAATATACAAGTTTAGGACCTTTA
TTTGAGCAAGGAACAATTGCATATGGCATTGGTTCTGCATTTGAAGTTTTCAACATTTGGAGCTTAATTTTAACTGGCCT
AGGCTTGCATATCGTTGCTGGTTTAAGTAAAAAACAAGCAATAATTTTAATTTCTATATTCTTTATCCTTACAATTGGTT
TTAGTATGCTGGGCGGCATGTTCTCTGGTTTTGGCGCATAA

Upstream 100 bases:

>100_bases
ATCGTTTTATTCGTCATTAAAGCGTTATTCTTAGCGGCGATTGTTATGTTAATTACGGCATTTTTACCAAATATGCCAGT
ATAAATAAGGAGGCATTATA

Downstream 100 bases:

>100_bases
CATATTGTTTTGAAAAGGTGGCTCTTCGGAGTCACCTTTTTTATTTTTACCCTTATTTCAAATACGACCAGCAGAATTTC
AAATTCTACTTCATGTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MEANINTQDAGGKKPSLFGMITSPGEQFERMKTKSPVWGGFVLFLVMGTIFATVAAYLGLINNPEMAKLLKEDTTGIMKG
TTLGIGAIGGLVGTAFGLFIVAGFYKIIMMFMSNDTPYMKILSIYIYANVVFYLGSLINVALGYILGGNGIDKYTSLGPL
FEQGTIAYGIGSAFEVFNIWSLILTGLGLHIVAGLSKKQAIILISIFFILTIGFSMLGGMFSGFGA

Sequences:

>Translated_226_residues
MEANINTQDAGGKKPSLFGMITSPGEQFERMKTKSPVWGGFVLFLVMGTIFATVAAYLGLINNPEMAKLLKEDTTGIMKG
TTLGIGAIGGLVGTAFGLFIVAGFYKIIMMFMSNDTPYMKILSIYIYANVVFYLGSLINVALGYILGGNGIDKYTSLGPL
FEQGTIAYGIGSAFEVFNIWSLILTGLGLHIVAGLSKKQAIILISIFFILTIGFSMLGGMFSGFGA
>Mature_226_residues
MEANINTQDAGGKKPSLFGMITSPGEQFERMKTKSPVWGGFVLFLVMGTIFATVAAYLGLINNPEMAKLLKEDTTGIMKG
TTLGIGAIGGLVGTAFGLFIVAGFYKIIMMFMSNDTPYMKILSIYIYANVVFYLGSLINVALGYILGGNGIDKYTSLGPL
FEQGTIAYGIGSAFEVFNIWSLILTGLGLHIVAGLSKKQAIILISIFFILTIGFSMLGGMFSGFGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 24101; Mature: 24101

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEANINTQDAGGKKPSLFGMITSPGEQFERMKTKSPVWGGFVLFLVMGTIFATVAAYLGL
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
INNPEMAKLLKEDTTGIMKGTTLGIGAIGGLVGTAFGLFIVAGFYKIIMMFMSNDTPYMK
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ILSIYIYANVVFYLGSLINVALGYILGGNGIDKYTSLGPLFEQGTIAYGIGSAFEVFNIW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCEEECCCHHHHHHHHH
SLILTGLGLHIVAGLSKKQAIILISIFFILTIGFSMLGGMFSGFGA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEANINTQDAGGKKPSLFGMITSPGEQFERMKTKSPVWGGFVLFLVMGTIFATVAAYLGL
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
INNPEMAKLLKEDTTGIMKGTTLGIGAIGGLVGTAFGLFIVAGFYKIIMMFMSNDTPYMK
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ILSIYIYANVVFYLGSLINVALGYILGGNGIDKYTSLGPLFEQGTIAYGIGSAFEVFNIW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCEEECCCHHHHHHHHH
SLILTGLGLHIVAGLSKKQAIILISIFFILTIGFSMLGGMFSGFGA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]