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The map label for this gene is ylmC [H]

Identifier: 49478895

GI number: 49478895

Start: 3742338

End: 3742622

Strand: Reverse

Name: ylmC [H]

Synonym: BT9727_3644

Alternate gene names: 49478895

Gene position: 3742622-3742338 (Counterclockwise)

Preceding gene: 49478441

Following gene: 49476775

Centisome position: 71.46

GC content: 31.93

Gene sequence:

>285_bases
ATGAAAGTGATACGAATTTCGGAGTTACAGATGAAAGATATAATAAATGTTTCAGATGGAAAAAGGCTTGGAAATATTGG
AGATATCGAAATCGATATGAACACAGGGAAAATTGAGTCTATTATTATTGCTAAACAGACACGTACGTTAGGAATTTTTG
GAAAAGACATAGAAATTGTAATTCCTTGGAAGGGAATTGTGAAAATTGGGGAAGATGTCATACTTGTTAGAGTAAATCCT
GTTAATTCTGTAACAGAATCAATACAAACACCGACAATTTCATAA

Upstream 100 bases:

>100_bases
TGTGTTCATATAATGAAAACAATATGGGATTGGCAAGAGGGTGCTTCCTGTTAATTTAAGAAATAGTATTTTTTAAAATT
CGTTATATATAAGGGAGAGG

Downstream 100 bases:

>100_bases
AGAATATTACAAATTCCTCTTTTTTTTCTGTTAGGATTATGAAAAAATAAAAGTATGGTAAAATAGACAGGAAGTACCAT
GCTTTTTTATGTTATTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKVIRISELQMKDIINVSDGKRLGNIGDIEIDMNTGKIESIIIAKQTRTLGIFGKDIEIVIPWKGIVKIGEDVILVRVNP
VNSVTESIQTPTIS

Sequences:

>Translated_94_residues
MKVIRISELQMKDIINVSDGKRLGNIGDIEIDMNTGKIESIIIAKQTRTLGIFGKDIEIVIPWKGIVKIGEDVILVRVNP
VNSVTESIQTPTIS
>Mature_94_residues
MKVIRISELQMKDIINVSDGKRLGNIGDIEIDMNTGKIESIIIAKQTRTLGIFGKDIEIVIPWKGIVKIGEDVILVRVNP
VNSVTESIQTPTIS

Specific function: Unknown

COG id: COG1873

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ylmC/ymxH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007903
- InterPro:   IPR011033
- InterPro:   IPR014238 [H]

Pfam domain/function: PF05239 PRC [H]

EC number: NA

Molecular weight: Translated: 10371; Mature: 10371

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIRISELQMKDIINVSDGKRLGNIGDIEIDMNTGKIESIIIAKQTRTLGIFGKDIEIV
CEEEEECCCCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEEEECCEEEEEECCCEEEE
IPWKGIVKIGEDVILVRVNPVNSVTESIQTPTIS
ECCCHHEECCCCEEEEEECCCCHHHHHCCCCCCC
>Mature Secondary Structure
MKVIRISELQMKDIINVSDGKRLGNIGDIEIDMNTGKIESIIIAKQTRTLGIFGKDIEIV
CEEEEECCCCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEEEECCEEEEEECCCEEEE
IPWKGIVKIGEDVILVRVNPVNSVTESIQTPTIS
ECCCHHEECCCCEEEEEECCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]