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The map label for this gene is 49478877

Identifier: 49478877

GI number: 49478877

Start: 4839365

End: 4840324

Strand: Reverse

Name: 49478877

Synonym: BT9727_4790

Alternate gene names: NA

Gene position: 4840324-4839365 (Counterclockwise)

Preceding gene: 49481119

Following gene: 49481109

Centisome position: 92.41

GC content: 32.92

Gene sequence:

>960_bases
ATGATTGTGAAAGAACGACAAATGCCAATTTATTTACGGCAATTAGAAGCGCTATCCAGAAGATTACCTGCTCACCATCC
GAAGCGGGATATGGTTGTAGAAAGTTTAGTGAAACATAAAGCAGGTTACAAAGGTGAACAAGCTATCAATTATCCACTAA
GTTTTTTGCCGGAAGAAACATATAGTATTTTGCACGATATAAGGTTGTTTGATCAAAATCACCATTTTCAAATTGATACG
ATTATCATTTCAGCATATTTTCTTCTTCTCCTCGAAATAAAAAATATAGCAGGTACGTTACTATTTGATTCAAAGTTTAA
TCAGCTTATTAGAATATCAGAGGGGAATTCAGAAGGATTTCCAGATCCGATTTTACAAGTGAAAAGACAAGAGGAACAGT
TTAGAAAATGGTTAAGTTTAAATGGGTTTTCTCGTTTTTCGATTGAATCACTCGTTGTTATTAGTAATCCACGAACTATT
ATTAAAGCTTCAGACGATAATCTCCCTAATAAAATTATCCACAGTGCAAATTTACCTCATAAAATAAAATGGTTTGAGAG
TAAATATAAGAAAAAAACTATAAGAAATGTAGACGATCTTATTTGTCAAATAGTAAGGAATCATACTCCATTACAGCAAA
ATATCCTCGAACAATTTAAAATCAAAAAAGGAGAATTGTTAAACGGCGTACGATGTGAGGTATGCTCTATAATGCCGATG
TTGAAATTAAAAAAGGGGTGGTATTGTTCAAATTGTAAAGCTATCTCTAAAGTAGCACATGAGGGTGCGATACATGATTA
TGTACTTCTTATTAGTAGGACTTGTACAAATATGCAGTTAAAGGAATTTCTCCACATTCAATCGAGTGCAACAGTTCATA
GACTCCTCAAAACAATGAACATCCCACACACCGGCACTAATAAAGGGAGAAAATATGATTTAACTTCTTTCCAATTATAA

Upstream 100 bases:

>100_bases
CTCTGTCGAATCGTTGATATATTGAAAAAATCGTTGATATATTGTGAGTTATGATAGATATATTTGAAAAATCGTTGATA
TATTTTGAGGAGGACTAAAG

Downstream 100 bases:

>100_bases
TTTTGCTATAATAAATACGTACTTATACGAAGGGGAGTTTAATGAGAAAATGAAATCATTCAATATTGATCATTTTATCG
CGAGTGTTTTACAGTGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NERD Domain-Containing Protein; Nerd Domain-Containing Protein; NERD Domain Protein

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MIVKERQMPIYLRQLEALSRRLPAHHPKRDMVVESLVKHKAGYKGEQAINYPLSFLPEETYSILHDIRLFDQNHHFQIDT
IIISAYFLLLLEIKNIAGTLLFDSKFNQLIRISEGNSEGFPDPILQVKRQEEQFRKWLSLNGFSRFSIESLVVISNPRTI
IKASDDNLPNKIIHSANLPHKIKWFESKYKKKTIRNVDDLICQIVRNHTPLQQNILEQFKIKKGELLNGVRCEVCSIMPM
LKLKKGWYCSNCKAISKVAHEGAIHDYVLLISRTCTNMQLKEFLHIQSSATVHRLLKTMNIPHTGTNKGRKYDLTSFQL

Sequences:

>Translated_319_residues
MIVKERQMPIYLRQLEALSRRLPAHHPKRDMVVESLVKHKAGYKGEQAINYPLSFLPEETYSILHDIRLFDQNHHFQIDT
IIISAYFLLLLEIKNIAGTLLFDSKFNQLIRISEGNSEGFPDPILQVKRQEEQFRKWLSLNGFSRFSIESLVVISNPRTI
IKASDDNLPNKIIHSANLPHKIKWFESKYKKKTIRNVDDLICQIVRNHTPLQQNILEQFKIKKGELLNGVRCEVCSIMPM
LKLKKGWYCSNCKAISKVAHEGAIHDYVLLISRTCTNMQLKEFLHIQSSATVHRLLKTMNIPHTGTNKGRKYDLTSFQL
>Mature_319_residues
MIVKERQMPIYLRQLEALSRRLPAHHPKRDMVVESLVKHKAGYKGEQAINYPLSFLPEETYSILHDIRLFDQNHHFQIDT
IIISAYFLLLLEIKNIAGTLLFDSKFNQLIRISEGNSEGFPDPILQVKRQEEQFRKWLSLNGFSRFSIESLVVISNPRTI
IKASDDNLPNKIIHSANLPHKIKWFESKYKKKTIRNVDDLICQIVRNHTPLQQNILEQFKIKKGELLNGVRCEVCSIMPM
LKLKKGWYCSNCKAISKVAHEGAIHDYVLLISRTCTNMQLKEFLHIQSSATVHRLLKTMNIPHTGTNKGRKYDLTSFQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37058; Mature: 37058

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKERQMPIYLRQLEALSRRLPAHHPKRDMVVESLVKHKAGYKGEQAINYPLSFLPEET
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCHHHCCHHH
YSILHDIRLFDQNHHFQIDTIIISAYFLLLLEIKNIAGTLLFDSKFNQLIRISEGNSEGF
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCC
PDPILQVKRQEEQFRKWLSLNGFSRFSIESLVVISNPRTIIKASDDNLPNKIIHSANLPH
CCHHHHHHHHHHHHHHHHHCCCCCEECCEEEEEEECCCEEEEECCCCCCHHHHHCCCCCH
KIKWFESKYKKKTIRNVDDLICQIVRNHTPLQQNILEQFKIKKGELLNGVRCEVCSIMPM
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHH
LKLKKGWYCSNCKAISKVAHEGAIHDYVLLISRTCTNMQLKEFLHIQSSATVHRLLKTMN
HHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCC
IPHTGTNKGRKYDLTSFQL
CCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MIVKERQMPIYLRQLEALSRRLPAHHPKRDMVVESLVKHKAGYKGEQAINYPLSFLPEET
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCHHHCCHHH
YSILHDIRLFDQNHHFQIDTIIISAYFLLLLEIKNIAGTLLFDSKFNQLIRISEGNSEGF
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCC
PDPILQVKRQEEQFRKWLSLNGFSRFSIESLVVISNPRTIIKASDDNLPNKIIHSANLPH
CCHHHHHHHHHHHHHHHHHCCCCCEECCEEEEEEECCCEEEEECCCCCCHHHHHCCCCCH
KIKWFESKYKKKTIRNVDDLICQIVRNHTPLQQNILEQFKIKKGELLNGVRCEVCSIMPM
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHH
LKLKKGWYCSNCKAISKVAHEGAIHDYVLLISRTCTNMQLKEFLHIQSSATVHRLLKTMN
HHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCC
IPHTGTNKGRKYDLTSFQL
CCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA