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The map label for this gene is 49478765

Identifier: 49478765

GI number: 49478765

Start: 4580167

End: 4580940

Strand: Reverse

Name: 49478765

Synonym: BT9727_4533

Alternate gene names: NA

Gene position: 4580940-4580167 (Counterclockwise)

Preceding gene: 49480731

Following gene: 49480730

Centisome position: 87.46

GC content: 35.14

Gene sequence:

>774_bases
ATGAATTTAAAGAAAATTTTTTTTACAGGTGCGATTGCCGTAACAACTGCACTTACATCTATTGGAACGGTACAAGCAAG
TATTAGCTTCAAAGATGTTCCAGCTGGTCATTGGTCTTATAAAGCAATCTTAGATTTAGCAAGTAAAAATATTGTTACTG
GATACGGAAATGGAATTTTTGGATTTGGTGATGATGTGACTCGAGAGCAAGTTGCTAGACTTATGTATCTACAGCTAAAG
CCGGAATCACAAGAGAATTACAATAATCCGTATAATGATATTAATGATCATTCAACAAGTTTTAAAAGAGAAATTTTAGC
ATTAACAGAAATGGGGATTTTTGCAGGGGATGAAAAAGGGAACTTTAGACCCAAAGCTTCTTTAACTCGTGAAGAAATGG
CCCAAGTATTAACAAATGCATATAAATTAGTGGCGAAATCAGAGCATACATTTGTAGATGTAGATAGAAAATCATGGTCG
AATAAAGCGATTAGCGCTGTACAATCTAACAGAATTGCTGCTGGAACAGGCGATAACATGTTTTCACCTAAGATGAATGT
AACTCGTGAACAATATGTACAGTTCTTATATAATGCGACATTACCATATGAGGAAAGACCAGGAGCAAATCAAGAGCCAA
AGCGCTTTGCTAATTGTAAAGAAGCAAATGATGCTGGATATTATGATATTACAAGAGATAGTCCGTATTATGGTAAGCAT
TTAGATCGTGATGGCGATGGAATTGCTTGTGAGAGAAATAAGAGCAGTAAATAA

Upstream 100 bases:

>100_bases
TGGGATTCTTTTTTGTGTTCGACATGATATGACAAAATGTATTTTTATATTTTGTTATTATGTTAGATAGTGAATAAGAA
AAGAAAAAGGGGACTTTAGA

Downstream 100 bases:

>100_bases
GAAAAAGCACTCAGCCTGAGTGCTTTTTTCTTATGGAAACATGCTATTTTTTTAGGCGCTTTTCATAAAATGAAAGTAAG
GAAATGAAAGTGGGTGACAA

Product: S-layer protein

Products: NA

Alternate protein names: Surface layer protein [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNLKKIFFTGAIAVTTALTSIGTVQASISFKDVPAGHWSYKAILDLASKNIVTGYGNGIFGFGDDVTREQVARLMYLQLK
PESQENYNNPYNDINDHSTSFKREILALTEMGIFAGDEKGNFRPKASLTREEMAQVLTNAYKLVAKSEHTFVDVDRKSWS
NKAISAVQSNRIAAGTGDNMFSPKMNVTREQYVQFLYNATLPYEERPGANQEPKRFANCKEANDAGYYDITRDSPYYGKH
LDRDGDGIACERNKSSK

Sequences:

>Translated_257_residues
MNLKKIFFTGAIAVTTALTSIGTVQASISFKDVPAGHWSYKAILDLASKNIVTGYGNGIFGFGDDVTREQVARLMYLQLK
PESQENYNNPYNDINDHSTSFKREILALTEMGIFAGDEKGNFRPKASLTREEMAQVLTNAYKLVAKSEHTFVDVDRKSWS
NKAISAVQSNRIAAGTGDNMFSPKMNVTREQYVQFLYNATLPYEERPGANQEPKRFANCKEANDAGYYDITRDSPYYGKH
LDRDGDGIACERNKSSK
>Mature_257_residues
MNLKKIFFTGAIAVTTALTSIGTVQASISFKDVPAGHWSYKAILDLASKNIVTGYGNGIFGFGDDVTREQVARLMYLQLK
PESQENYNNPYNDINDHSTSFKREILALTEMGIFAGDEKGNFRPKASLTREEMAQVLTNAYKLVAKSEHTFVDVDRKSWS
NKAISAVQSNRIAAGTGDNMFSPKMNVTREQYVQFLYNATLPYEERPGANQEPKRFANCKEANDAGYYDITRDSPYYGKH
LDRDGDGIACERNKSSK

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003343
- InterPro:   IPR001119 [H]

Pfam domain/function: PF02368 Big_2; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 28747; Mature: 28747

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKKIFFTGAIAVTTALTSIGTVQASISFKDVPAGHWSYKAILDLASKNIVTGYGNGIF
CCCCEEEEHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCC
GFGDDVTREQVARLMYLQLKPESQENYNNPYNDINDHSTSFKREILALTEMGIFAGDEKG
CCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCC
NFRPKASLTREEMAQVLTNAYKLVAKSEHTFVDVDRKSWSNKAISAVQSNRIAAGTGDNM
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEECCCCCC
FSPKMNVTREQYVQFLYNATLPYEERPGANQEPKRFANCKEANDAGYYDITRDSPYYGKH
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCC
LDRDGDGIACERNKSSK
CCCCCCCEEECCCCCCC
>Mature Secondary Structure
MNLKKIFFTGAIAVTTALTSIGTVQASISFKDVPAGHWSYKAILDLASKNIVTGYGNGIF
CCCCEEEEHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCC
GFGDDVTREQVARLMYLQLKPESQENYNNPYNDINDHSTSFKREILALTEMGIFAGDEKG
CCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCC
NFRPKASLTREEMAQVLTNAYKLVAKSEHTFVDVDRKSWSNKAISAVQSNRIAAGTGDNM
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEECCCCCC
FSPKMNVTREQYVQFLYNATLPYEERPGANQEPKRFANCKEANDAGYYDITRDSPYYGKH
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCC
LDRDGDGIACERNKSSK
CCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8964497 [H]