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The map label for this gene is yjfC [H]

Identifier: 49478748

GI number: 49478748

Start: 4541728

End: 4542621

Strand: Reverse

Name: yjfC [H]

Synonym: BT9727_4487

Alternate gene names: 49478748

Gene position: 4542621-4541728 (Counterclockwise)

Preceding gene: 49478749

Following gene: 49481406

Centisome position: 86.73

GC content: 33.56

Gene sequence:

>894_bases
ATGAAAATTTTTATAGAAGATACTATAAGTCAATATGATATATTACTTTCACTATCACCTGAAGAAAGGGAGAATTTTTT
TAGGCATACAATGATGAAACCATTTGAAGGAATGTGGAATGCAATTAATGTACCGATGAAATCTAAGGATCCAAAAGGTT
ATGACGTCATGATGGCAACACGAATGCTAGGGTATTTAGATATAAACGAGACAAAATTAGCAGAAGAAGCATTAAATGAT
TTGAAGAAGATGAATGCATTAAAAATTGCTGAAAAAACTTTAAAAGAATGTATAGATTTCTCTTCTGAGCATGATTTAAG
AGTAAGTGCAGAGGAACTGAGATTTGGTATGTATATTGCAGACCCAAAAAAATTAAAAAATCAAAACAGTTATACTGGTT
TTGGTGGTATTCCTGGTTATGTTATAGCAATAATTCGCCCGAATAGCTACAATGTTCCAAGATTTCCGGCACTCATTGCA
CATGAATTTCATCATAATTTACGATTCTCTTATTTTGAATGGAATCATGGAGATGTAACCGTAGCTGATTATATAATTAT
TGAGGGACTCGCCGATTCTTTTGCTACCGCATTGTATGGTAAAGAATTTTTAGGGCCATGGGTTACTTCAATTGACAATG
AAGACCTTGAATACTCTATTTACGTAATAAAAGAAGGGCTTAATGTGAAAGGGTTTGCGGAGGTAAGTAGCTATATGTTT
GGAGATGATTTCGCCAAAAAAGAAGGTTATCAACCAGTAGGCTTATCAACCGGTGCGGGTTATGCTGTAGGGTATCACAT
TGTGCAGTCTTTTATGAAAAATAATAATGTTACAATCCGAGAAGCTACATTGTTAAGTACAGAAGAAATAATAAAGGGGT
CTAATGTTTTTTAA

Upstream 100 bases:

>100_bases
TAAACCATCTAGAGAATAGCAACGATGAAGATAGTATATTAAATGCTCTTAAACTTGCTCACGTAGTTAATGATAAGTAC
ATGATGAAACGAGGATATTT

Downstream 100 bases:

>100_bases
GTTAATTGTATTTTGAAAGACGCTATTGTTTCTAAAAGTTATGAATTCTTATGTGGATTTGGAAATTAAGTAAGCATAAT
ACCATCCGTAAGAACGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKIFIEDTISQYDILLSLSPEERENFFRHTMMKPFEGMWNAINVPMKSKDPKGYDVMMATRMLGYLDINETKLAEEALND
LKKMNALKIAEKTLKECIDFSSEHDLRVSAEELRFGMYIADPKKLKNQNSYTGFGGIPGYVIAIIRPNSYNVPRFPALIA
HEFHHNLRFSYFEWNHGDVTVADYIIIEGLADSFATALYGKEFLGPWVTSIDNEDLEYSIYVIKEGLNVKGFAEVSSYMF
GDDFAKKEGYQPVGLSTGAGYAVGYHIVQSFMKNNNVTIREATLLSTEEIIKGSNVF

Sequences:

>Translated_297_residues
MKIFIEDTISQYDILLSLSPEERENFFRHTMMKPFEGMWNAINVPMKSKDPKGYDVMMATRMLGYLDINETKLAEEALND
LKKMNALKIAEKTLKECIDFSSEHDLRVSAEELRFGMYIADPKKLKNQNSYTGFGGIPGYVIAIIRPNSYNVPRFPALIA
HEFHHNLRFSYFEWNHGDVTVADYIIIEGLADSFATALYGKEFLGPWVTSIDNEDLEYSIYVIKEGLNVKGFAEVSSYMF
GDDFAKKEGYQPVGLSTGAGYAVGYHIVQSFMKNNNVTIREATLLSTEEIIKGSNVF
>Mature_297_residues
MKIFIEDTISQYDILLSLSPEERENFFRHTMMKPFEGMWNAINVPMKSKDPKGYDVMMATRMLGYLDINETKLAEEALND
LKKMNALKIAEKTLKECIDFSSEHDLRVSAEELRFGMYIADPKKLKNQNSYTGFGGIPGYVIAIIRPNSYNVPRFPALIA
HEFHHNLRFSYFEWNHGDVTVADYIIIEGLADSFATALYGKEFLGPWVTSIDNEDLEYSIYVIKEGLNVKGFAEVSSYMF
GDDFAKKEGYQPVGLSTGAGYAVGYHIVQSFMKNNNVTIREATLLSTEEIIKGSNVF

Specific function: Unknown

COG id: COG5504

COG function: function code O; Predicted Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018728 [H]

Pfam domain/function: PF10026 DUF2268 [H]

EC number: NA

Molecular weight: Translated: 33769; Mature: 33769

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFIEDTISQYDILLSLSPEERENFFRHTMMKPFEGMWNAINVPMKSKDPKGYDVMMAT
CEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHH
RMLGYLDINETKLAEEALNDLKKMNALKIAEKTLKECIDFSSEHDLRVSAEELRFGMYIA
HHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHEEEEEEE
DPKKLKNQNSYTGFGGIPGYVIAIIRPNSYNVPRFPALIAHEFHHNLRFSYFEWNHGDVT
CHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCEE
VADYIIIEGLADSFATALYGKEFLGPWVTSIDNEDLEYSIYVIKEGLNVKGFAEVSSYMF
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH
GDDFAKKEGYQPVGLSTGAGYAVGYHIVQSFMKNNNVTIREATLLSTEEIIKGSNVF
CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCC
>Mature Secondary Structure
MKIFIEDTISQYDILLSLSPEERENFFRHTMMKPFEGMWNAINVPMKSKDPKGYDVMMAT
CEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHH
RMLGYLDINETKLAEEALNDLKKMNALKIAEKTLKECIDFSSEHDLRVSAEELRFGMYIA
HHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHEEEEEEE
DPKKLKNQNSYTGFGGIPGYVIAIIRPNSYNVPRFPALIAHEFHHNLRFSYFEWNHGDVT
CHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCEE
VADYIIIEGLADSFATALYGKEFLGPWVTSIDNEDLEYSIYVIKEGLNVKGFAEVSSYMF
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH
GDDFAKKEGYQPVGLSTGAGYAVGYHIVQSFMKNNNVTIREATLLSTEEIIKGSNVF
CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]