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The map label for this gene is yizB [H]

Identifier: 49478332

GI number: 49478332

Start: 3531841

End: 3532170

Strand: Reverse

Name: yizB [H]

Synonym: BT9727_3448

Alternate gene names: 49478332

Gene position: 3532170-3531841 (Counterclockwise)

Preceding gene: 49478333

Following gene: 49478331

Centisome position: 67.44

GC content: 37.58

Gene sequence:

>330_bases
TTGTCCTTGAACGTTCAGTTTAAAAAAGGTGTGTTAGAACTATGTGTACTGGCACTTGTGAAACGTAAGGATTGTTACGG
CTATGAACTTGTTCAGCAAATCTCAAATAAATTTTTAATATCGGAAGGATCGGTATACCCTTTATTACGTCGTTTAACGA
AAGAAGGATATTTTCAAACGTATTTAAAAGAATCTACGGAGGGACCGCCTCGTAAATATTATCAACTAACTGAGCAAGGG
GAAACGCAACTGAATTTGTTAGTAACAGAGTGGCGTGATTTTGCGAAAGGCGTACAAGAAATTATTGAAGGGGTGCAATG
GGATGAGTAA

Upstream 100 bases:

>100_bases
TGTTTAAAAATACAGTACCTTGCAATAAACAATACTAAGTGGTATATTATGGATAAGGAAGGTACCGTGTATTGAACAGT
ACTGAAATGAGAAAGGGGGA

Downstream 100 bases:

>100_bases
AGAACAGTTTCTTAAGGAATTATCAAGTCATCTTAGAAAGTTACCAGACGAAGAGAGGAAAGATATTTTATTTGATTATG
AAGAGCACTTTCAGTTTGGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSLNVQFKKGVLELCVLALVKRKDCYGYELVQQISNKFLISEGSVYPLLRRLTKEGYFQTYLKESTEGPPRKYYQLTEQG
ETQLNLLVTEWRDFAKGVQEIIEGVQWDE

Sequences:

>Translated_109_residues
MSLNVQFKKGVLELCVLALVKRKDCYGYELVQQISNKFLISEGSVYPLLRRLTKEGYFQTYLKESTEGPPRKYYQLTEQG
ETQLNLLVTEWRDFAKGVQEIIEGVQWDE
>Mature_108_residues
SLNVQFKKGVLELCVLALVKRKDCYGYELVQQISNKFLISEGSVYPLLRRLTKEGYFQTYLKESTEGPPRKYYQLTEQGE
TQLNLLVTEWRDFAKGVQEIIEGVQWDE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12758; Mature: 12627

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNVQFKKGVLELCVLALVKRKDCYGYELVQQISNKFLISEGSVYPLLRRLTKEGYFQT
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH
YLKESTEGPPRKYYQLTEQGETQLNLLVTEWRDFAKGVQEIIEGVQWDE
HHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLNVQFKKGVLELCVLALVKRKDCYGYELVQQISNKFLISEGSVYPLLRRLTKEGYFQT
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH
YLKESTEGPPRKYYQLTEQGETQLNLLVTEWRDFAKGVQEIIEGVQWDE
HHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]