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The map label for this gene is yneB [H]

Identifier: 49478329

GI number: 49478329

Start: 3528982

End: 3529638

Strand: Reverse

Name: yneB [H]

Synonym: BT9727_3445

Alternate gene names: 49478329

Gene position: 3529638-3528982 (Counterclockwise)

Preceding gene: 49478330

Following gene: 49479436

Centisome position: 67.39

GC content: 35.31

Gene sequence:

>657_bases
ATGAATGCAATTATTTATGCACGTGTGAGTACAACGAAAGAAGCGCAAGAAACATCATTATTACGTCAAAAAGATGAATT
ATTGCATTTAGCAGAGCGCTATCAAATGAATGTTATTAAGGTGATTGAAGAGCAGGCTAGTGGATATACAATTGAACGTG
ACGGTATATTAGAAGTGCTCGATACGATTCGAGATGAACAAATTGATGTGCTACTTATACAAGATGAAACGCGCCTTGGT
AGAGGGAATGCAAAGATTGCGTTAATGCACTGTTTACATAAAGAAGGAATAAAAGTATATACGCATACACATAATGGTGA
ATTGCAATTGTCGGATTCTGATTCAATGGTATTAGATATTATTGGTATTGTTGAAGAATATCAAAGAAAGATTCATAATT
TAAAAATTAAACGAGGTATGCAACGAGCAGTAGAAAAAGGCTATCGTCCAGAAAATAATTTAAAAAATCGTCATTTAAGC
GTAGGAAGAGAGAAAAAAGAAGTGCCAATTGAGGAAATCGTACGTTTGCGCAAAAGTGAACTCACGTTTGAAGAAATTGC
AGCAACGCTTCGCGGCTTTGGTCATAATGTTTCAAAGGCAACTGTGCATCGTAGATATGTAGAGTATACGAAGCAATTGC
TTGATAAAGAAGAGTAA

Upstream 100 bases:

>100_bases
AGTATAACATGTGAAAAAACATTCTACAAACATAAGTTCGAACAAAAGGCGAATTTATGTTACACTGAAGGGAAATAATA
GTGAGAAAGAGGGGTTCATA

Downstream 100 bases:

>100_bases
CTATTGTATGATAATAATCAGTTTTGATTAGAAGGGGGATTCGAGATGCTTAGTCACGAACTCGTTGAACGCATTAACTT
CTTAGCGAAAAAAGCAAAAG

Product: site-specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNAIIYARVSTTKEAQETSLLRQKDELLHLAERYQMNVIKVIEEQASGYTIERDGILEVLDTIRDEQIDVLLIQDETRLG
RGNAKIALMHCLHKEGIKVYTHTHNGELQLSDSDSMVLDIIGIVEEYQRKIHNLKIKRGMQRAVEKGYRPENNLKNRHLS
VGREKKEVPIEEIVRLRKSELTFEEIAATLRGFGHNVSKATVHRRYVEYTKQLLDKEE

Sequences:

>Translated_218_residues
MNAIIYARVSTTKEAQETSLLRQKDELLHLAERYQMNVIKVIEEQASGYTIERDGILEVLDTIRDEQIDVLLIQDETRLG
RGNAKIALMHCLHKEGIKVYTHTHNGELQLSDSDSMVLDIIGIVEEYQRKIHNLKIKRGMQRAVEKGYRPENNLKNRHLS
VGREKKEVPIEEIVRLRKSELTFEEIAATLRGFGHNVSKATVHRRYVEYTKQLLDKEE
>Mature_218_residues
MNAIIYARVSTTKEAQETSLLRQKDELLHLAERYQMNVIKVIEEQASGYTIERDGILEVLDTIRDEQIDVLLIQDETRLG
RGNAKIALMHCLHKEGIKVYTHTHNGELQLSDSDSMVLDIIGIVEEYQRKIHNLKIKRGMQRAVEKGYRPENNLKNRHLS
VGREKKEVPIEEIVRLRKSELTFEEIAATLRGFGHNVSKATVHRRYVEYTKQLLDKEE

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006119 [H]

Pfam domain/function: PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 25315; Mature: 25315

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIIYARVSTTKEAQETSLLRQKDELLHLAERYQMNVIKVIEEQASGYTIERDGILEVL
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHH
DTIRDEQIDVLLIQDETRLGRGNAKIALMHCLHKEGIKVYTHTHNGELQLSDSDSMVLDI
HHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCCCHHHHH
IGIVEEYQRKIHNLKIKRGMQRAVEKGYRPENNLKNRHLSVGREKKEVPIEEIVRLRKSE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHC
LTFEEIAATLRGFGHNVSKATVHRRYVEYTKQLLDKEE
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNAIIYARVSTTKEAQETSLLRQKDELLHLAERYQMNVIKVIEEQASGYTIERDGILEVL
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHH
DTIRDEQIDVLLIQDETRLGRGNAKIALMHCLHKEGIKVYTHTHNGELQLSDSDSMVLDI
HHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCCCHHHHH
IGIVEEYQRKIHNLKIKRGMQRAVEKGYRPENNLKNRHLSVGREKKEVPIEEIVRLRKSE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHC
LTFEEIAATLRGFGHNVSKATVHRRYVEYTKQLLDKEE
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]