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The map label for this gene is ywqJ [H]

Identifier: 49478137

GI number: 49478137

Start: 3139429

End: 3139914

Strand: Reverse

Name: ywqJ [H]

Synonym: BT9727_3065

Alternate gene names: 49478137

Gene position: 3139914-3139429 (Counterclockwise)

Preceding gene: 49478138

Following gene: 49478136

Centisome position: 59.95

GC content: 36.63

Gene sequence:

>486_bases
TTGCGTAATAAATATGGTCGATTTACTCCACGCAAATTAAATCATAGAATTAATTTGCGTGGTGCTGTAGAAAAAGAGGT
TGAAAGATTAAATACATTAGGGCTAACCAAAAACGAAATGGGTCCAGCGGTTGCAGGAACATTTGATAAAAATACTGGAA
AATATTATTTTGGAATTAACAATACTGACGGTGATATTCCAGTTACATTGCACACAATTATTAGGGATCGGATAGAGAAC
ATGCCTAGTAGCGTTAGAGATGGTTATAAATTTACGTATGGAGCAGGTTCCCACGCAGAGGTATACTCCTTGAATCAGGC
ATTACTTGCGAATCACAACGCACAGCCAACAGATTTTATTACCCACGTCGTAAGATCTGGTAAGAAATTGAAACCGGCTG
GTATGATGATGCCAACCTATCCACATTGTAATTTTATTACTGAAGGATTTGAATTTAGTTCAGAGGTGAGAAAAATTGGA
AAATAA

Upstream 100 bases:

>100_bases
TTTTATATGGTTTGTTTTTTTATTGTAAGAGTTTAAGATTACAACATAGGGTACGGGTGAAGTTTCTAATAGTAGTGAAA
AATTAAGTAGAATAGAATAC

Downstream 100 bases:

>100_bases
GATGGGTGTATTAAGTAAAGAATATGTATTAGAACAGGGTATAGATTTTGATGAGGAACTATGGTTTACCTCTTACAGCG
ATGAAGTGCTGGATAACCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRNKYGRFTPRKLNHRINLRGAVEKEVERLNTLGLTKNEMGPAVAGTFDKNTGKYYFGINNTDGDIPVTLHTIIRDRIEN
MPSSVRDGYKFTYGAGSHAEVYSLNQALLANHNAQPTDFITHVVRSGKKLKPAGMMMPTYPHCNFITEGFEFSSEVRKIG
K

Sequences:

>Translated_161_residues
MRNKYGRFTPRKLNHRINLRGAVEKEVERLNTLGLTKNEMGPAVAGTFDKNTGKYYFGINNTDGDIPVTLHTIIRDRIEN
MPSSVRDGYKFTYGAGSHAEVYSLNQALLANHNAQPTDFITHVVRSGKKLKPAGMMMPTYPHCNFITEGFEFSSEVRKIG
K
>Mature_161_residues
MRNKYGRFTPRKLNHRINLRGAVEKEVERLNTLGLTKNEMGPAVAGTFDKNTGKYYFGINNTDGDIPVTLHTIIRDRIEN
MPSSVRDGYKFTYGAGSHAEVYSLNQALLANHNAQPTDFITHVVRSGKKLKPAGMMMPTYPHCNFITEGFEFSSEVRKIG
K

Specific function: Unknown

COG id: COG5444

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0720 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006829 [H]

Pfam domain/function: PF04740 Transposase_30 [H]

EC number: NA

Molecular weight: Translated: 18138; Mature: 18138

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKYGRFTPRKLNHRINLRGAVEKEVERLNTLGLTKNEMGPAVAGTFDKNTGKYYFGIN
CCCCCCCCCCHHHCCEECCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEEEC
NTDGDIPVTLHTIIRDRIENMPSSVRDGYKFTYGAGSHAEVYSLNQALLANHNAQPTDFI
CCCCCCCCHHHHHHHHHHHHCCHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHH
THVVRSGKKLKPAGMMMPTYPHCNFITEGFEFSSEVRKIGK
HHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MRNKYGRFTPRKLNHRINLRGAVEKEVERLNTLGLTKNEMGPAVAGTFDKNTGKYYFGIN
CCCCCCCCCCHHHCCEECCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEEEC
NTDGDIPVTLHTIIRDRIENMPSSVRDGYKFTYGAGSHAEVYSLNQALLANHNAQPTDFI
CCCCCCCCHHHHHHHHHHHHCCHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHH
THVVRSGKKLKPAGMMMPTYPHCNFITEGFEFSSEVRKIGK
HHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]