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The map label for this gene is phaF [H]

Identifier: 49476292

GI number: 49476292

Start: 1895012

End: 1895293

Strand: Reverse

Name: phaF [H]

Synonym: BH16420

Alternate gene names: 49476292

Gene position: 1895293-1895012 (Counterclockwise)

Preceding gene: 49476293

Following gene: 49476291

Centisome position: 98.15

GC content: 38.65

Gene sequence:

>282_bases
ATGAGTATAGTAATCCTTTATTGGGGGATTTTCCTTTCGCAGTTTTTTTTAAGTCTGGCGATGATCTTCGCACTGTTTCG
GTTGATTCGTGGTCCTCGGGCGCAGGATCGTGTTGTTGGTTTGGATGCTCTTTATATAACCACTATTCTTTTATTTCTTA
CGTTCGATATCCGTTCAGGAACAACCATTTATTTTGTAGCAGCTTTTATTATTGGGCTGTTAGGTCCTGTCTCAAGTATT
GCTTTGGCAAAATTTTTAATGCGCGGAGAAATTATTGAATGA

Upstream 100 bases:

>100_bases
ATGGTGAACTTTTGCTTCATGTCTTAAATTTAAAAAACAGATATGATTACCAACAGTTAATCAAGCAACGGTATGAGCAA
TTACTTTTGGAGATTTTCTC

Downstream 100 bases:

>100_bases
AGGATGAGATATCGCTTATAGTTGCTCTTTTTATCACTGTTTTCTTAATATTAGGATCGGGACTGACACTGATTGGAACA
ATAGGTTTGGTGCGTTTTTC

Product: putative monovalent cation/H+ antiporter subunit F

Products: NA

Alternate protein names: pH adaptation potassium efflux system protein F; Pha system subunit F [H]

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSIVILYWGIFLSQFFLSLAMIFALFRLIRGPRAQDRVVGLDALYITTILLFLTFDIRSGTTIYFVAAFIIGLLGPVSSI
ALAKFLMRGEIIE

Sequences:

>Translated_93_residues
MSIVILYWGIFLSQFFLSLAMIFALFRLIRGPRAQDRVVGLDALYITTILLFLTFDIRSGTTIYFVAAFIIGLLGPVSSI
ALAKFLMRGEIIE
>Mature_92_residues
SIVILYWGIFLSQFFLSLAMIFALFRLIRGPRAQDRVVGLDALYITTILLFLTFDIRSGTTIYFVAAFIIGLLGPVSSIA
LAKFLMRGEIIE

Specific function: Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development [H]

COG id: COG2212

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhF subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007208 [H]

Pfam domain/function: PF04066 MrpF_PhaF [H]

EC number: NA

Molecular weight: Translated: 10452; Mature: 10321

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVILYWGIFLSQFFLSLAMIFALFRLIRGPRAQDRVVGLDALYITTILLFLTFDIRSG
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TTIYFVAAFIIGLLGPVSSIALAKFLMRGEIIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SIVILYWGIFLSQFFLSLAMIFALFRLIRGPRAQDRVVGLDALYITTILLFLTFDIRSG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TTIYFVAAFIIGLLGPVSSIALAKFLMRGEIIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680201; 11481430 [H]