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The map label for this gene is ATPD [H]

Identifier: 49476187

GI number: 49476187

Start: 1762888

End: 1764483

Strand: Reverse

Name: ATPD [H]

Synonym: BH15320

Alternate gene names: 49476187

Gene position: 1764483-1762888 (Counterclockwise)

Preceding gene: 49476188

Following gene: 49476186

Centisome position: 91.37

GC content: 43.61

Gene sequence:

>1596_bases
ATGGTAAAAGCAGTGACGTCAAGTAAGGAAACAGCAAAAGTTGAGAAAAAGAAATCTGCTCCTCGTTCAGGCGTGAAAAA
AGCCGTCTCGAAATCTCAAGCTGGTGTAAAGGATTCCTCTAGTCCTGTGCATAAGTCTTCTAAAAAAGCTCCGCTTGCAG
AAGCAGCAGTCGGTGTGATCAAACAAGTTATTGGTGCTGTTGTTGATGTGCAGTTTGAAGGCCCTTTGCCAAATATTCTC
AATGCATTAGAAACAGATAATTTGGGCAATCGGCTAGTTTTAGAAGTTGCTCAGCATTTGGGTGAAAATACCGTGCGTAC
CATTGCCATGGATACTACCGATGGTCTTGTCCGTGGTCAAAAAGTTTTTGATACAGGAACACAGATCAGTGTTCCCGTGG
GAGAAGCAACACTTGGTCGTATTATGAATGTGATTGGAGAGCCGGTTGATAATGTTGGCCCAATTGCTACAAGCAAAACC
CGTTCCATTCACCAAGAGGCTCCTGAATATGTGGAGCAATCAACCGCATCAGAAATCCTTGTGACTGGTATTAAAGTCGT
TGATCTGTTAGCTCCTTATTCTAAAGGGGGGAAGGTTGGTTTGTTTGGAGGTGCCGGTGTTGGTAAAACCGTTCTCATTA
TGGAGCTTATCAACAATATTGCAAAGGCGCATGGTGGCTATTCAGTGTTTGCCGGTGTTGGTGAACGTACACGTGAGGGA
AATGATCTTTATTATGAAATGATCGAAAGCCGTGTGAATGTGAATCCAAAAGACAACAATGGTTCAACAGAAGGATCAAA
ATGTGCACTCGTTTATGGGCAAATGAATGAACCACCAGGGGCGCGTGCACGTGTGGCTCTTTCAGGATTGACCATTGCAG
AAAGTTTCCGTGATGAGGGACAAGATGTTTTGTTCTTCGTAGATAATATTTTCCGTTTTACGCAAGCAGGCGCTGAAGTG
TCAGCTCTTTTAGGGCGTATTCCTTCTGCTGTAGGGTATCAGCCAACTTTGGCAACTGATATGGGGGCTTTGCAAGAGCG
TATTACCAGTACAAGAACAGGCTCTATTACCTCTGTTCAGGCTATTTATGTTCCTGCCGATGACTTGACAGATCCCGCTC
CTGCAACATCTTTTGCCCATTTGGATGCGACCACAGTTCTTTCTCGTTCCATTGCTGAAAAGGGTATTTATCCAGCAGTC
GATCCACTCGATTCTTTCTCACGTATGTTAGATCCATTGATCGTGGGGGAAGAGCATTATACTGTTGCTTGTCAAGTTCA
GACCATTTTGCAACGTTATAGGTCATTGCAGGATATTATTGCTATTCTTGGAATGGATGAACTTTCTGAAGATGATAAGT
TACTGGTAGGGCGTGCCCGTAAAATTGAACGTTTCCTTTCCCAACCTTTCCATGTTGCTGAAGCCTTTACCGGTTCACCT
GGAAAATTGGTGCCTTTAGAAGAGACAATCAAAGGCTTTAAGGGTCTTTGCGCTGGTGAGTATGATAATTTGCCAGAAGC
GGCTTTTTATATGGTCGGTTCGATTGATGAAGCAGTTGAAAAAGGAAAGCGTCTTATTGCAGAAGTTTCTTCATAA

Upstream 100 bases:

>100_bases
ACGGTGGCTTATAATCGTCAGCGTCAGGCACAGATTACGACAGAATTGATCGAAATTATTGCGGGCGCTGAAGCGCTTTA
AATTGAAAAGGTAAGGATTG

Downstream 100 bases:

>100_bases
AAGAAAATCTGTAATGAATGTTTTTTGTAGAGAGGATAGTAAGTCCTCATAATTGAGCCTCGTGGAGATTTTTGTGGAAA
ACAATAGAGTAAACCATTTT

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MVKAVTSSKETAKVEKKKSAPRSGVKKAVSKSQAGVKDSSSPVHKSSKKAPLAEAAVGVIKQVIGAVVDVQFEGPLPNIL
NALETDNLGNRLVLEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSKT
RSIHQEAPEYVEQSTASEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG
NDLYYEMIESRVNVNPKDNNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRFTQAGAEV
SALLGRIPSAVGYQPTLATDMGALQERITSTRTGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAV
DPLDSFSRMLDPLIVGEEHYTVACQVQTILQRYRSLQDIIAILGMDELSEDDKLLVGRARKIERFLSQPFHVAEAFTGSP
GKLVPLEETIKGFKGLCAGEYDNLPEAAFYMVGSIDEAVEKGKRLIAEVSS

Sequences:

>Translated_531_residues
MVKAVTSSKETAKVEKKKSAPRSGVKKAVSKSQAGVKDSSSPVHKSSKKAPLAEAAVGVIKQVIGAVVDVQFEGPLPNIL
NALETDNLGNRLVLEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSKT
RSIHQEAPEYVEQSTASEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG
NDLYYEMIESRVNVNPKDNNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRFTQAGAEV
SALLGRIPSAVGYQPTLATDMGALQERITSTRTGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAV
DPLDSFSRMLDPLIVGEEHYTVACQVQTILQRYRSLQDIIAILGMDELSEDDKLLVGRARKIERFLSQPFHVAEAFTGSP
GKLVPLEETIKGFKGLCAGEYDNLPEAAFYMVGSIDEAVEKGKRLIAEVSS
>Mature_531_residues
MVKAVTSSKETAKVEKKKSAPRSGVKKAVSKSQAGVKDSSSPVHKSSKKAPLAEAAVGVIKQVIGAVVDVQFEGPLPNIL
NALETDNLGNRLVLEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSKT
RSIHQEAPEYVEQSTASEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG
NDLYYEMIESRVNVNPKDNNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRFTQAGAEV
SALLGRIPSAVGYQPTLATDMGALQERITSTRTGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAV
DPLDSFSRMLDPLIVGEEHYTVACQVQTILQRYRSLQDIIAILGMDELSEDDKLLVGRARKIERFLSQPFHVAEAFTGSP
GKLVPLEETIKGFKGLCAGEYDNLPEAAFYMVGSIDEAVEKGKRLIAEVSS

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=531, Percent_Identity=71.939736346516, Blast_Score=736, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=310, Percent_Identity=28.3870967741935, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI19913428, Length=372, Percent_Identity=25.5376344086022, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI19913426, Length=378, Percent_Identity=25.6613756613757, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI50345984, Length=444, Percent_Identity=25.4504504504505, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4757810, Length=444, Percent_Identity=25.4504504504505, Blast_Score=95, Evalue=2e-19,
Organism=Escherichia coli, GI1790170, Length=471, Percent_Identity=69.6390658174098, Blast_Score=651, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=347, Percent_Identity=28.2420749279539, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1790172, Length=336, Percent_Identity=25.5952380952381, Blast_Score=103, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25144756, Length=482, Percent_Identity=73.2365145228216, Blast_Score=695, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17565854, Length=352, Percent_Identity=27.5568181818182, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17570191, Length=361, Percent_Identity=25.207756232687, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17510931, Length=359, Percent_Identity=23.9554317548747, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI71988063, Length=415, Percent_Identity=24.8192771084337, Blast_Score=98, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI71988080, Length=415, Percent_Identity=24.8192771084337, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71988074, Length=340, Percent_Identity=25, Blast_Score=79, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=500, Percent_Identity=70.4, Blast_Score=685, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=364, Percent_Identity=25.5494505494505, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6319370, Length=376, Percent_Identity=26.063829787234, Blast_Score=94, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6320016, Length=225, Percent_Identity=26.2222222222222, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24638766, Length=474, Percent_Identity=77.8481012658228, Blast_Score=736, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=476, Percent_Identity=69.7478991596639, Blast_Score=663, Evalue=0.0,
Organism=Drosophila melanogaster, GI24638768, Length=90, Percent_Identity=75.5555555555556, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI20129479, Length=309, Percent_Identity=27.831715210356, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583988, Length=317, Percent_Identity=29.0220820189274, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24583986, Length=317, Percent_Identity=29.0220820189274, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24583984, Length=317, Percent_Identity=29.0220820189274, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24583992, Length=339, Percent_Identity=27.7286135693215, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI281361666, Length=368, Percent_Identity=26.3586956521739, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24646341, Length=368, Percent_Identity=26.3586956521739, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI17136796, Length=368, Percent_Identity=26.3586956521739, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24658560, Length=424, Percent_Identity=25, Blast_Score=87, Evalue=4e-17,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 56595; Mature: 56595

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKAVTSSKETAKVEKKKSAPRSGVKKAVSKSQAGVKDSSSPVHKSSKKAPLAEAAVGVI
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
KQVIGAVVDVQFEGPLPNILNALETDNLGNRLVLEVAQHLGENTVRTIAMDTTDGLVRGQ
HHHHHHHEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHCCC
KVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSKTRSIHQEAPEYVEQSTASEIL
HHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG
HHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
NDLYYEMIESRVNVNPKDNNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEG
CHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCC
QDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTRTGSITSVQ
CEEEHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
AIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHY
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEECCCCE
TVACQVQTILQRYRSLQDIIAILGMDELSEDDKLLVGRARKIERFLSQPFHVAEAFTGSP
EEEHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCC
GKLVPLEETIKGFKGLCAGEYDNLPEAAFYMVGSIDEAVEKGKRLIAEVSS
CCEECHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKAVTSSKETAKVEKKKSAPRSGVKKAVSKSQAGVKDSSSPVHKSSKKAPLAEAAVGVI
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
KQVIGAVVDVQFEGPLPNILNALETDNLGNRLVLEVAQHLGENTVRTIAMDTTDGLVRGQ
HHHHHHHEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHCCC
KVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSKTRSIHQEAPEYVEQSTASEIL
HHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG
HHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
NDLYYEMIESRVNVNPKDNNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEG
CHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCC
QDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTRTGSITSVQ
CEEEHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
AIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHY
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEECCCCE
TVACQVQTILQRYRSLQDIIAILGMDELSEDDKLLVGRARKIERFLSQPFHVAEAFTGSP
EEEHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCC
GKLVPLEETIKGFKGLCAGEYDNLPEAAFYMVGSIDEAVEKGKRLIAEVSS
CCEECHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA