| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49476063
Identifier: 49476063
GI number: 49476063
Start: 1607638
End: 1609101
Strand: Reverse
Name: 49476063
Synonym: BH13990
Alternate gene names: NA
Gene position: 1609101-1607638 (Counterclockwise)
Preceding gene: 49476064
Following gene: 49476062
Centisome position: 83.33
GC content: 42.49
Gene sequence:
>1464_bases ATGGCTTTTTTCCCAGTTGCTGATTATCGGCCCGATGTTGCTGATATTAATGGCATCTTTACCGATGAGCTTATTAATGT GTTGCCTGCTGATGGGTCCTATATCCCTATGCCAAGCTTTCAACCTGTGTCAGAGCCTTGTCCTCATCCAATTTTAGGAG CTCTTGCTGTTAAAACAAAAAATGGTGTCTCTGTTATTGTTGGGACCGGACAAAAAATCTACCTTCTCGACAATACGACA AAGCAATGGAAAGATATCAGCCAAAAGGGAAAATCTTATCTTGCCAATGTCGATGCTCCATGGTCCTTCGCTTTGTTTGG GGATTATATCATTGCTGTGAATGCCAATGATAAGCCACAAGTGATCGACATTAATCATGACAAAAACTTTAGAGATTTAG GTGGAAATCCACCACAAGCGGGGATTGTGCGTGTGTGGGGAGATTTCGTTTGTCTGATGAAATTGACAGAGCATCCAAGA CGTGTCCATTGGTCAGGATTGAACGATGCCGAATTTTGGACTGTTGGAAAAAAAAGCTGCGATTATCAAGATTTTCCCGA TGGCGGTTTCGTGCAAGGTGCGACCGAAACAACAAATCCAATCATCTTTATGCGGTCCGCAATCTATGCCGGATCTTTTA TTCCTGGATCTAAGATTATTTTCAGTTTCCAAAAAATCCATGATAAACGCGGTGCAAAAAACGCTGAATCTATCGTTTGT CGAGGCGATCTTGCCTTCTTTGCTGATGAGGGAGGATTTTATCAGATCACCAATGAGGGACAAATTATACCAATTGGCTT CGAAAAAGTCGACCGGACGATGACTGCAAAATCGAGGCAGAATAATCTGTATACTCTATCTGCTGCTATCGATGGAGTGT ATAATCGCGTTTATTGGATGGTCGATACCGATGAAAGCGTCCACAAACGTATTTTACTTGTTTATGATTGGGGATTGCAA AAATGGACTAAGGCGGTTGTGGATATCAAAATGATTTTGCCCATCTTTTTAGCAGGAACTACCTTAGAAGGATTGGATCA CGTCGCTCAGAATATTGATGATTTACCCTTTTCTCTCGACAGTAAAGCTTGGAAAAATGAATCTCCTATTCTTGGTGCCT TTGATCATCAAGGGAGAATGGGGTCGTTTTCTGGTCCTCCTATGGCTTGTGTGGTAACATCACAGGAAATGGGGCAGACA AATGGCATGATAACAAGAGTGAAAAATATTATGCCTCAAGTAAATAGTGGAGAGCTTTATTTGTCTGTGGGAATGCGCTT TCGGCAATCCCTCGAAGAGAAAACTGTTTGGTTGCCGGAAAGACAACCTTCCTATAATACGGGGCAAATTCATTTGCGCG CAAGAGCACGGTTTTATCGCTTTAAATTGCGTATCCCGGAAGGAGTAAATTGGTCTCATGTCACGGGCTTTGATGTGGAA TTGCAGTCTGCCGGCATGCGATAA
Upstream 100 bases:
>100_bases CTTATCTTACGGGGCTTTTTTGATTAAAATAAAAAAGTTTTGGCGATTTGAAATCTCGCATTGATAAGGTTTTTCAAATA TTCTTCTAATGGGGTTCTCA
Downstream 100 bases:
>100_bases TGCATGTCTTTGTGATTAAAGACGTTATGCGGTAACCTATACCTTTAAATAAAGACGCTATGTGGAAAAGTGCGCCTCCT ATCGTGCAGGAATGATGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MAFFPVADYRPDVADINGIFTDELINVLPADGSYIPMPSFQPVSEPCPHPILGALAVKTKNGVSVIVGTGQKIYLLDNTT KQWKDISQKGKSYLANVDAPWSFALFGDYIIAVNANDKPQVIDINHDKNFRDLGGNPPQAGIVRVWGDFVCLMKLTEHPR RVHWSGLNDAEFWTVGKKSCDYQDFPDGGFVQGATETTNPIIFMRSAIYAGSFIPGSKIIFSFQKIHDKRGAKNAESIVC RGDLAFFADEGGFYQITNEGQIIPIGFEKVDRTMTAKSRQNNLYTLSAAIDGVYNRVYWMVDTDESVHKRILLVYDWGLQ KWTKAVVDIKMILPIFLAGTTLEGLDHVAQNIDDLPFSLDSKAWKNESPILGAFDHQGRMGSFSGPPMACVVTSQEMGQT NGMITRVKNIMPQVNSGELYLSVGMRFRQSLEEKTVWLPERQPSYNTGQIHLRARARFYRFKLRIPEGVNWSHVTGFDVE LQSAGMR
Sequences:
>Translated_487_residues MAFFPVADYRPDVADINGIFTDELINVLPADGSYIPMPSFQPVSEPCPHPILGALAVKTKNGVSVIVGTGQKIYLLDNTT KQWKDISQKGKSYLANVDAPWSFALFGDYIIAVNANDKPQVIDINHDKNFRDLGGNPPQAGIVRVWGDFVCLMKLTEHPR RVHWSGLNDAEFWTVGKKSCDYQDFPDGGFVQGATETTNPIIFMRSAIYAGSFIPGSKIIFSFQKIHDKRGAKNAESIVC RGDLAFFADEGGFYQITNEGQIIPIGFEKVDRTMTAKSRQNNLYTLSAAIDGVYNRVYWMVDTDESVHKRILLVYDWGLQ KWTKAVVDIKMILPIFLAGTTLEGLDHVAQNIDDLPFSLDSKAWKNESPILGAFDHQGRMGSFSGPPMACVVTSQEMGQT NGMITRVKNIMPQVNSGELYLSVGMRFRQSLEEKTVWLPERQPSYNTGQIHLRARARFYRFKLRIPEGVNWSHVTGFDVE LQSAGMR >Mature_486_residues AFFPVADYRPDVADINGIFTDELINVLPADGSYIPMPSFQPVSEPCPHPILGALAVKTKNGVSVIVGTGQKIYLLDNTTK QWKDISQKGKSYLANVDAPWSFALFGDYIIAVNANDKPQVIDINHDKNFRDLGGNPPQAGIVRVWGDFVCLMKLTEHPRR VHWSGLNDAEFWTVGKKSCDYQDFPDGGFVQGATETTNPIIFMRSAIYAGSFIPGSKIIFSFQKIHDKRGAKNAESIVCR GDLAFFADEGGFYQITNEGQIIPIGFEKVDRTMTAKSRQNNLYTLSAAIDGVYNRVYWMVDTDESVHKRILLVYDWGLQK WTKAVVDIKMILPIFLAGTTLEGLDHVAQNIDDLPFSLDSKAWKNESPILGAFDHQGRMGSFSGPPMACVVTSQEMGQTN GMITRVKNIMPQVNSGELYLSVGMRFRQSLEEKTVWLPERQPSYNTGQIHLRARARFYRFKLRIPEGVNWSHVTGFDVEL QSAGMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54525; Mature: 54394
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFFPVADYRPDVADINGIFTDELINVLPADGSYIPMPSFQPVSEPCPHPILGALAVKTK CCCCCCCCCCCCHHHCCCEEHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEEC NGVSVIVGTGQKIYLLDNTTKQWKDISQKGKSYLANVDAPWSFALFGDYIIAVNANDKPQ CCCEEEEECCCEEEEEECCCHHHHHHHHHCHHEEECCCCCEEEEEECCEEEEECCCCCCE VIDINHDKNFRDLGGNPPQAGIVRVWGDFVCLMKLTEHPRRVHWSGLNDAEFWTVGKKSC EEECCCCCCHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCC DYQDFPDGGFVQGATETTNPIIFMRSAIYAGSFIPGSKIIFSFQKIHDKRGAKNAESIVC CCCCCCCCCEEECCCCCCCCEEEEEEHHHCCCCCCCCHHEEHHHHHHHHCCCCCCCEEEE RGDLAFFADEGGFYQITNEGQIIPIGFEKVDRTMTAKSRQNNLYTLSAAIDGVYNRVYWM ECCEEEEECCCCEEEECCCCCEEEECHHHHHHHHHHHCCCCCEEEEHHHHHHHCCEEEEE VDTDESVHKRILLVYDWGLQKWTKAVVDIKMILPIFLAGTTLEGLDHVAQNIDDLPFSLD EECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC SKAWKNESPILGAFDHQGRMGSFSGPPMACVVTSQEMGQTNGMITRVKNIMPQVNSGELY CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECHHCCCCCCHHHHHHHHCCCCCCCCEE LSVGMRFRQSLEEKTVWLPERQPSYNTGQIHLRARARFYRFKLRIPEGVNWSHVTGFDVE EEECHHHHHHHHHCEEECCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEECCEEE LQSAGMR ECCCCCC >Mature Secondary Structure AFFPVADYRPDVADINGIFTDELINVLPADGSYIPMPSFQPVSEPCPHPILGALAVKTK CCCCCCCCCCCHHHCCCEEHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEEC NGVSVIVGTGQKIYLLDNTTKQWKDISQKGKSYLANVDAPWSFALFGDYIIAVNANDKPQ CCCEEEEECCCEEEEEECCCHHHHHHHHHCHHEEECCCCCEEEEEECCEEEEECCCCCCE VIDINHDKNFRDLGGNPPQAGIVRVWGDFVCLMKLTEHPRRVHWSGLNDAEFWTVGKKSC EEECCCCCCHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCC DYQDFPDGGFVQGATETTNPIIFMRSAIYAGSFIPGSKIIFSFQKIHDKRGAKNAESIVC CCCCCCCCCEEECCCCCCCCEEEEEEHHHCCCCCCCCHHEEHHHHHHHHCCCCCCCEEEE RGDLAFFADEGGFYQITNEGQIIPIGFEKVDRTMTAKSRQNNLYTLSAAIDGVYNRVYWM ECCEEEEECCCCEEEECCCCCEEEECHHHHHHHHHHHCCCCCEEEEHHHHHHHCCEEEEE VDTDESVHKRILLVYDWGLQKWTKAVVDIKMILPIFLAGTTLEGLDHVAQNIDDLPFSLD EECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC SKAWKNESPILGAFDHQGRMGSFSGPPMACVVTSQEMGQTNGMITRVKNIMPQVNSGELY CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECHHCCCCCCHHHHHHHHCCCCCCCCEE LSVGMRFRQSLEEKTVWLPERQPSYNTGQIHLRARARFYRFKLRIPEGVNWSHVTGFDVE EEECHHHHHHHHHCEEECCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEECCEEE LQSAGMR ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA