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The map label for this gene is lpcC [H]

Identifier: 49475892

GI number: 49475892

Start: 1300302

End: 1301360

Strand: Reverse

Name: lpcC [H]

Synonym: BH11690

Alternate gene names: 49475892

Gene position: 1301360-1300302 (Counterclockwise)

Preceding gene: 49475893

Following gene: 49475890

Centisome position: 67.39

GC content: 42.3

Gene sequence:

>1059_bases
ATGCATGTGTCTTTAGAAGAGACAGAGATTATTGCTCCTCACTTTAAAAAGCGTTTATCGGGTATAACCTCTACTGTTGT
TCAGCTTATTCCATTACAGCGAAAGCAGGGTATACGGATAGCGACTTTTGGATTTGGATTACCAAACAATTTGCCGGCTC
TTGCCTTTAAGGATCTTTTCGGGCTTTGGAAAAGCCCGATTGGTAAACCATTTCGTATTTGGCATGCACGGCGCAATATT
GAGATGCTTTGTGGGATCTTTTTGCGTGATGTCTTGCGAATGAAGCTTAAACTTCTCTTTACATCGGCTTCTCAACGTCA
TCATAAGTCTTTTACCAAATGGTTGATTCGGCGTATGGATAAGGTTATTGCTACCAGTATACGTACGGGAACCTATTTAG
AAGTGCCGCATCAGGTTATTATGCATGGGGTGGATGTTAGGCGTTTTTCACCACCCAAAACTTTTGAAGATTGCTTTTCT
TCATCTGGGTTTCCTGGAAAATATGCTGTGGGATGTTTTGGACGTGTACGCTATTCAAAGGGCACTGATTTGTTTGTGGA
TGCAATGATCGCATTATTGCCACGCTATCCTGAGTGGACAGCACTTATTGCTGGTCGCACGATAGAGCAACATTATTATT
TTGAAAAAAAATTACGTCAAAAAATTGCAGAAGCAGGTCTGAATGATCGCATTGTTTTTCTTGGTGAGGTGCTCAATACA
CCTTTATGGTACCGCCGTTTGTCGCTATATGTAGCACCTTCTCGTACAGAAGGTTTCGGTTTGACACCCTTGGAGGCAAT
GGCATCACAAACAGCTGTCGTAGCGAGTGATGCGGGAGCTTATAAAGAATTGGTGGTGGAAGGAACAGGAACGATTGTTC
AAGCAGGAGATGGAGGTGCTTTAACAGCAGCGATTGAACCTTATTTTGCTGATTTAGAAAAAACAATGGCTGCAGGGGAA
AAAGCTTTAGCACATGTCCGTACCCATTTTCCTTTGGAAAAGGAGGCAGCTGCAATTAGGAATGTTTATGAGACAGTGTT
TGCGCAAAAAACACTTTAA

Upstream 100 bases:

>100_bases
TGCATTGATTGGCAAGCAAGAGGGGGATGTGATTGAAGTCAATGCTCCCGGGGGAGCTCATAATTATGAAATTATTGAAG
TCCAATATATCTAAATTATT

Downstream 100 bases:

>100_bases
ATATGCAAAAACCTTTTTGAGGAGTGCAGAGAATAAACCTCTTTTATAGGAAGGACCCTTGCATATCAGTTTTTAAGCGA
ATAGCAAAGTAACGCAAATA

Product: lipopolysaccharide core biosynthesis mannosyltransferase lpcc

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MHVSLEETEIIAPHFKKRLSGITSTVVQLIPLQRKQGIRIATFGFGLPNNLPALAFKDLFGLWKSPIGKPFRIWHARRNI
EMLCGIFLRDVLRMKLKLLFTSASQRHHKSFTKWLIRRMDKVIATSIRTGTYLEVPHQVIMHGVDVRRFSPPKTFEDCFS
SSGFPGKYAVGCFGRVRYSKGTDLFVDAMIALLPRYPEWTALIAGRTIEQHYYFEKKLRQKIAEAGLNDRIVFLGEVLNT
PLWYRRLSLYVAPSRTEGFGLTPLEAMASQTAVVASDAGAYKELVVEGTGTIVQAGDGGALTAAIEPYFADLEKTMAAGE
KALAHVRTHFPLEKEAAAIRNVYETVFAQKTL

Sequences:

>Translated_352_residues
MHVSLEETEIIAPHFKKRLSGITSTVVQLIPLQRKQGIRIATFGFGLPNNLPALAFKDLFGLWKSPIGKPFRIWHARRNI
EMLCGIFLRDVLRMKLKLLFTSASQRHHKSFTKWLIRRMDKVIATSIRTGTYLEVPHQVIMHGVDVRRFSPPKTFEDCFS
SSGFPGKYAVGCFGRVRYSKGTDLFVDAMIALLPRYPEWTALIAGRTIEQHYYFEKKLRQKIAEAGLNDRIVFLGEVLNT
PLWYRRLSLYVAPSRTEGFGLTPLEAMASQTAVVASDAGAYKELVVEGTGTIVQAGDGGALTAAIEPYFADLEKTMAAGE
KALAHVRTHFPLEKEAAAIRNVYETVFAQKTL
>Mature_352_residues
MHVSLEETEIIAPHFKKRLSGITSTVVQLIPLQRKQGIRIATFGFGLPNNLPALAFKDLFGLWKSPIGKPFRIWHARRNI
EMLCGIFLRDVLRMKLKLLFTSASQRHHKSFTKWLIRRMDKVIATSIRTGTYLEVPHQVIMHGVDVRRFSPPKTFEDCFS
SSGFPGKYAVGCFGRVRYSKGTDLFVDAMIALLPRYPEWTALIAGRTIEQHYYFEKKLRQKIAEAGLNDRIVFLGEVLNT
PLWYRRLSLYVAPSRTEGFGLTPLEAMASQTAVVASDAGAYKELVVEGTGTIVQAGDGGALTAAIEPYFADLEKTMAAGE
KALAHVRTHFPLEKEAAAIRNVYETVFAQKTL

Specific function: Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 39535; Mature: 39535

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVSLEETEIIAPHFKKRLSGITSTVVQLIPLQRKQGIRIATFGFGLPNNLPALAFKDLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCHHHHHHHHH
GLWKSPIGKPFRIWHARRNIEMLCGIFLRDVLRMKLKLLFTSASQRHHKSFTKWLIRRMD
HHHHCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIATSIRTGTYLEVPHQVIMHGVDVRRFSPPKTFEDCFSSSGFPGKYAVGCFGRVRYSK
HHHHHHHCCCCEECCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEEHHHHEEEEECC
GTDLFVDAMIALLPRYPEWTALIAGRTIEQHYYFEKKLRQKIAEAGLNDRIVFLGEVLNT
CCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCC
PLWYRRLSLYVAPSRTEGFGLTPLEAMASQTAVVASDAGAYKELVVEGTGTIVQAGDGGA
CHHHHHEEEEECCCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHEEECCCCEEECCCCCE
LTAAIEPYFADLEKTMAAGEKALAHVRTHFPLEKEAAAIRNVYETVFAQKTL
EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHVSLEETEIIAPHFKKRLSGITSTVVQLIPLQRKQGIRIATFGFGLPNNLPALAFKDLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCHHHHHHHHH
GLWKSPIGKPFRIWHARRNIEMLCGIFLRDVLRMKLKLLFTSASQRHHKSFTKWLIRRMD
HHHHCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIATSIRTGTYLEVPHQVIMHGVDVRRFSPPKTFEDCFSSSGFPGKYAVGCFGRVRYSK
HHHHHHHCCCCEECCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEEHHHHEEEEECC
GTDLFVDAMIALLPRYPEWTALIAGRTIEQHYYFEKKLRQKIAEAGLNDRIVFLGEVLNT
CCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCC
PLWYRRLSLYVAPSRTEGFGLTPLEAMASQTAVVASDAGAYKELVVEGTGTIVQAGDGGA
CHHHHHEEEEECCCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHEEECCCCEEECCCCCE
LTAAIEPYFADLEKTMAAGEKALAHVRTHFPLEKEAAAIRNVYETVFAQKTL
EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9756877 [H]