| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is ilvA [H]
Identifier: 49475814
GI number: 49475814
Start: 1178217
End: 1179482
Strand: Reverse
Name: ilvA [H]
Synonym: BH10760
Alternate gene names: 49475814
Gene position: 1179482-1178217 (Counterclockwise)
Preceding gene: 49475815
Following gene: 49475813
Centisome position: 61.08
GC content: 38.39
Gene sequence:
>1266_bases ATGAGTAAATTTATTCAAGATGTAAACAAGGCTATGGTGGCTTTGCATAATGTATTTGCTGAAACACCTCTTCAAAGAAA TGATTTTCTTAGTCAAAAATATGATGCAGAAATTTATTTGAAACGTGAAGATTTAACTCCGGTGCGATCTTATAAAATTC GCGGTGCTTTTAATTTTGTTTCAGAAATGCTTAGTAAGATATCTCAAAATGCAGCATTTGTTTGTGCGTCAGCGGGGAAT CACGCGCAAGGGGTTTCATTTGTTTGTCGCTATTTTAAACGTAAAGGCGTGATTTTTATGCCTGTGACGACTCCGCAACA GAAAATTGATAAGACGCGCGTTTTTGGCAAAGAGTTTGTTGATATCCGTTTAATTGGTGAAACGTTTGACCAATGTTATG CGGCAGCACAATCTTTTGCTACGGAGAGTGGTGGTGTTATGGCACCGCCTTTTGACGATACTCGCATTATTACGGGGCAG GCGACAGTTTTGTGTGAGGCTGTTTTGCAATGGAAAAAACTCAATGGTGAAAGCGAGCCAGATTTGATTCTTGTTCCTGT AGGTGGAGGTGGTTTGGCCAGTGGTGTGAGCAAGTTTTTACATGAATATGGTTGGAAAACCGAGCTTCGCTTTGTTGAGC CGAAGAGAGCTGCAAGCTTGTTCGCTTGTTTGAAGAGTGGAAAACGTGTCAAACTTGAAAATATCGATACATTTGTAGAT GGAGCTGCTGTAGCGGAAATTGGTGCATTAAATTACACAATGCTGAAGAATTTTTCACCAGATTCTGTTATTACAGTTCC TGAGAACCGTGTGTGCTCTACAATGGTTGAAATGCTCAATGTTGAAGGTGTGGTCCTTGAACCAGCTGGTGCTTTATCGA TTGATGCTCTTAATAGTCTTCCTCCTCAAGAGTTAAAAGGCAAAAAAATTCTTCTTGTTATTTCAGGTGGTAATTTTGAT TTTGAGCGTTTGCCAGATATTAAAGAACGTTCTCTCCGTTTTCAGGGATTGAGAAAATATTTTATTTTTAGTTTTCCGCA ACATCCTGGTGCGTTGCGTAGTTTTCTTGCTCAACTTTCTCCCGATGATGATATCGTACGTTTTGAATATCTTAAGAAAT CATCTAGAAGTTTTGGCTCTGTGTTGATTGCAATTGAGACAAAAAAATATGATAATTTTTGTCTTTTAGAGAAAAAATTT CAAGAGTTAGGTTGGCGCTATCGTGATATTACCGATGATCAAACGTTATTTGATTTTGTTATCTGA
Upstream 100 bases:
>100_bases AAACTTTTCATTCTTCGTTCAATTTTTAACTGACAATGGCCGCTTTTATAGCTAGAAGGGGCCTGTATAGTATTAATTGA AGCATGAAATGACTGCTGTT
Downstream 100 bases:
>100_bases CGACCAATTCTTGCTGAAAAAAAAATATAAAAATCAGATCTCTTTTTTTGATTTTGTGCTGGAATTGTCTTTTTAAATAT TACTACTCAACACAGTTTAA
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSKFIQDVNKAMVALHNVFAETPLQRNDFLSQKYDAEIYLKREDLTPVRSYKIRGAFNFVSEMLSKISQNAAFVCASAGN HAQGVSFVCRYFKRKGVIFMPVTTPQQKIDKTRVFGKEFVDIRLIGETFDQCYAAAQSFATESGGVMAPPFDDTRIITGQ ATVLCEAVLQWKKLNGESEPDLILVPVGGGGLASGVSKFLHEYGWKTELRFVEPKRAASLFACLKSGKRVKLENIDTFVD GAAVAEIGALNYTMLKNFSPDSVITVPENRVCSTMVEMLNVEGVVLEPAGALSIDALNSLPPQELKGKKILLVISGGNFD FERLPDIKERSLRFQGLRKYFIFSFPQHPGALRSFLAQLSPDDDIVRFEYLKKSSRSFGSVLIAIETKKYDNFCLLEKKF QELGWRYRDITDDQTLFDFVI
Sequences:
>Translated_421_residues MSKFIQDVNKAMVALHNVFAETPLQRNDFLSQKYDAEIYLKREDLTPVRSYKIRGAFNFVSEMLSKISQNAAFVCASAGN HAQGVSFVCRYFKRKGVIFMPVTTPQQKIDKTRVFGKEFVDIRLIGETFDQCYAAAQSFATESGGVMAPPFDDTRIITGQ ATVLCEAVLQWKKLNGESEPDLILVPVGGGGLASGVSKFLHEYGWKTELRFVEPKRAASLFACLKSGKRVKLENIDTFVD GAAVAEIGALNYTMLKNFSPDSVITVPENRVCSTMVEMLNVEGVVLEPAGALSIDALNSLPPQELKGKKILLVISGGNFD FERLPDIKERSLRFQGLRKYFIFSFPQHPGALRSFLAQLSPDDDIVRFEYLKKSSRSFGSVLIAIETKKYDNFCLLEKKF QELGWRYRDITDDQTLFDFVI >Mature_420_residues SKFIQDVNKAMVALHNVFAETPLQRNDFLSQKYDAEIYLKREDLTPVRSYKIRGAFNFVSEMLSKISQNAAFVCASAGNH AQGVSFVCRYFKRKGVIFMPVTTPQQKIDKTRVFGKEFVDIRLIGETFDQCYAAAQSFATESGGVMAPPFDDTRIITGQA TVLCEAVLQWKKLNGESEPDLILVPVGGGGLASGVSKFLHEYGWKTELRFVEPKRAASLFACLKSGKRVKLENIDTFVDG AAVAEIGALNYTMLKNFSPDSVITVPENRVCSTMVEMLNVEGVVLEPAGALSIDALNSLPPQELKGKKILLVISGGNFDF ERLPDIKERSLRFQGLRKYFIFSFPQHPGALRSFLAQLSPDDDIVRFEYLKKSSRSFGSVLIAIETKKYDNFCLLEKKFQ ELGWRYRDITDDQTLFDFVI
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=321, Percent_Identity=26.1682242990654, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI33469958, Length=333, Percent_Identity=27.6276276276276, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI19923959, Length=334, Percent_Identity=27.5449101796407, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1790207, Length=399, Percent_Identity=30.3258145363409, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI1789505, Length=324, Percent_Identity=30.8641975308642, Blast_Score=124, Evalue=8e-30, Organism=Caenorhabditis elegans, GI71991565, Length=354, Percent_Identity=29.0960451977401, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17537387, Length=402, Percent_Identity=29.8507462686567, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17508781, Length=284, Percent_Identity=26.056338028169, Blast_Score=91, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6320930, Length=415, Percent_Identity=29.6385542168675, Blast_Score=176, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6322631, Length=317, Percent_Identity=28.7066246056782, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6319788, Length=282, Percent_Identity=23.4042553191489, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355833, Length=358, Percent_Identity=27.9329608938547, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR001721 - InterPro: IPR011820 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 47228; Mature: 47097
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFIQDVNKAMVALHNVFAETPLQRNDFLSQKYDAEIYLKREDLTPVRSYKIRGAFNFV CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCCCHHEEECHHHHHH SEMLSKISQNAAFVCASAGNHAQGVSFVCRYFKRKGVIFMPVTTPQQKIDKTRVFGKEFV HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCHHE DIRLIGETFDQCYAAAQSFATESGGVMAPPFDDTRIITGQATVLCEAVLQWKKLNGESEP EEEEHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCC DLILVPVGGGGLASGVSKFLHEYGWKTELRFVEPKRAASLFACLKSGKRVKLENIDTFVD CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCEEEECCCHHHHC GAAVAEIGALNYTMLKNFSPDSVITVPENRVCSTMVEMLNVEGVVLEPAGALSIDALNSL CHHHHHHCCCCHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCCEEECCCCCEEHHHHCCC PPQELKGKKILLVISGGNFDFERLPDIKERSLRFQGLRKYFIFSFPQHPGALRSFLAQLS CCHHHCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCC PDDDIVRFEYLKKSSRSFGSVLIAIETKKYDNFCLLEKKFQELGWRYRDITDDQTLFDFV CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEHHHHHHHHCCCEECCCCCCCHHHHHC I C >Mature Secondary Structure SKFIQDVNKAMVALHNVFAETPLQRNDFLSQKYDAEIYLKREDLTPVRSYKIRGAFNFV CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCCCHHEEECHHHHHH SEMLSKISQNAAFVCASAGNHAQGVSFVCRYFKRKGVIFMPVTTPQQKIDKTRVFGKEFV HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCHHE DIRLIGETFDQCYAAAQSFATESGGVMAPPFDDTRIITGQATVLCEAVLQWKKLNGESEP EEEEHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCC DLILVPVGGGGLASGVSKFLHEYGWKTELRFVEPKRAASLFACLKSGKRVKLENIDTFVD CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCEEEECCCHHHHC GAAVAEIGALNYTMLKNFSPDSVITVPENRVCSTMVEMLNVEGVVLEPAGALSIDALNSL CHHHHHHCCCCHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCCEEECCCCCEEHHHHCCC PPQELKGKKILLVISGGNFDFERLPDIKERSLRFQGLRKYFIFSFPQHPGALRSFLAQLS CCHHHCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCC PDDDIVRFEYLKKSSRSFGSVLIAIETKKYDNFCLLEKKFQELGWRYRDITDDQTLFDFV CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEHHHHHHHHCCCEECCCCCCCHHHHHC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA