| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is zraS [C]
Identifier: 49475714
GI number: 49475714
Start: 1057037
End: 1059514
Strand: Reverse
Name: zraS [C]
Synonym: BH09640
Alternate gene names: 49475714
Gene position: 1059514-1057037 (Counterclockwise)
Preceding gene: 49475716
Following gene: 49475713
Centisome position: 54.87
GC content: 35.47
Gene sequence:
>2478_bases ATGATTCTTCGTGTTGTTTTTGTAATAGCTTTTCTCTTCATTTTAGGTCTTCTAGGTTTTTTTTATCCGCAGGGCTTTTT ACAAAAAGCTACGTTGATATTTTTTTTGGCTTTAGCAATTATAGGGGGTGCTGCACTTGTTTTGGTTGGAATGGGGATTT TAAGATATAATGCAGCGCAGTTATATGAAGACTTTGATTTCACCATCTTTAATAATACCGATGATGCAATTATTATTTCT GATTTATCCGGTTTTGTTTATTATTCTAATCAAAATTATCAAAAAATCTTTACCTATAAGCCTAATTCTTCTTGTTATGC TGTCATTGCTGATCTTCCGGGAGCTGGTGCGTTGGCGTATCGCTTAAAAGTTGCAGCATATAGTGATCTTGCCGCGCAAG AAGAATTAAGGGTAGAACAGTCGATTTTTGTCCATTCACCGCAAAAAAACTCCGTTTGGTATAATATTTCTGTTCAACCA ATGGCAAGGCGAAGAAAAAAGTTTTTATTTTGGCGTATTGCCGATATTTCTCATTTGCAAGAGTGTCGTGAAGTTTTTTT CTCAAACCTTCAAGAAGCTATCAATCACTTAGATCAAGCGCCTGTTGGTTTTTTATCCGTTAATACACAGGGAACGATTC TTTATGCAAATGCGATTTTTGCCGAATGGTTTTCAATTGATTTGGCGAATTTTACTGTTGGGAAATATAGTTTTGATCAA TTATTTGATAGCGTTGGAGCTAATAGCTCATGGAGTGATATTTGTTTGCAAAATAACAAATATCAAAGTTCAGGGTACTC TTTGCCTTATAGGTTTTCCTTATCTTTAAATTCAGAGATCGGTTTGAAAATCTTGAATTGTTTTATGTGTGCTTCTTCTC TCTTAGAGGACAAAGTCATTTATCGTATTGTGGTAATCCCACAGAAAATACAAAAAGAAGAAAACGATAATCAATTAAAA TTACCCAGTGTCTTAGTAGAGTATTTTGATGCGAGTCCATTTGCAATAGCGGTGGTAAAGCAGGAAGGACAATTGCTTTA TATGAATAATGCCTTTTTATCACTCATGGGATGTACGGGCAATATTAATCTTTATGATGTCATATCTCGCCGTGATCGTG TGCAGCTAGAGCGTGCATTTTTGAAAATTACGACAAATAAAAACTATTCTGTTTCGATAGAAACAGTTTTAGAAAATAGT GAAGAACGCCATTTGCGTCTTCATGTTATGTCTATAACGCCATATCATGATGATGCATTACGAGATTTGATCATTATCTC TGTTATAGAAACAACAGAACAAAAAACGCTTGAAGATAAAATGATGCAAAATCAGAAAATGCAAGCTGTTGGGCAGCTGG CTGGAGGTATTGCGCATGATTTTAATAATGTTTTAACAGCAATTTTGATGTCGTGTGATCTTCTGTTAAATACGCATCGT AGTTTTGATCCTGCATATGCCGATCTTATTAATATTAAAAATAATGCTAACCGTGCGGCTGCACTTGTACAGCAGTTATT AGCTTTTTCTAGAAAGCAAACGCTTCAACCGGAAAAAGTTGATTTTACAGAACTTTTGTCAGATATTCGCAATCTTATTT TACCTCTTTTAGGCAATAATATTCAGTTAAAAATTATTCATGGAAGAGATTTGTGGAGTGTTGAAGTTGATCAAGCATCT TTCCAGCGTGTTATTATGAATTTGGTTATTAATGCGCGTGATGCTATGCCCAATGGCGGTATTGTTACGATTGCAACTAA CAATATTACAAAACAACAAAGTGCTGAGTTTCATCATGTTGGTTTTGGATTTGGTGAGTATGTACAGTTGACTATTTCAG ATACAGGAACTGGTATATCAGCTGCTGTACAAGAAAAAATGTTTGAGCCATTTTTTACAACAAAAGAAGTTGGAAAAGGA ACCGGGCTTGGTTTATCGATGGTTTATGGAATTATTAAACAGACAGGTGGTTACATTTACTGTGATAGCCGAGAAGGGGA AGGAACAACGTTTCATATTTTTCTTCCTCGTTATATTCCTGATACTGTCCATGTAGGTTCTCAGCAGATTGAAAAAGTTG AAGAACAAGAGAAAAATACCGACTTAACCGGATCTGCAACTATTTTGCTTGTTGAAGATGAAGATGCTGTCAGAATGGGT GGGGTGAGAGCGCTCCAAATGAGAGGATATACTGTTTTAGAAGCTGCAACTGGGGTTGAAGCACTTGCCGTTCTTGAAGA AAATAAGGGTGCTGTGGATATTGTTATTTCTGATGTGGTGATGCCAGAAATGGATGGACCTACTTTGCTTAAGGAATCGC GTAAAAATTATCCTGACATCAAATTTATTTTTGTTTCTGGGTATGCAAAAGATGCTTTTGCTAAAAATCTTCCACAAGAT GCTGTTTTTAGTTTTTTATCTAAGCCATTTACACTCAAACAGTTAGCTTTGAAAGTTAAAGAAACACTTACACAATAA
Upstream 100 bases:
>100_bases TTTGTGGCATAAGAAACGTCTATAATCAAGGCAAAGTGAGATGGATACAGGTTTTGAGAATAATGAGAGCTTATCATCTT CTTTTGTATATCGAGGAGGT
Downstream 100 bases:
>100_bases AATAGTGGGTTTTATGTTTTAAGATTTTTTAGATAAAAAGTTCGTGTCTCTGATAAGATATATAATAATGTATAATCGAT TTAACTGGGAGGAGATAGAC
Product: sensor histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 825; Mature: 825
Protein sequence:
>825_residues MILRVVFVIAFLFILGLLGFFYPQGFLQKATLIFFLALAIIGGAALVLVGMGILRYNAAQLYEDFDFTIFNNTDDAIIIS DLSGFVYYSNQNYQKIFTYKPNSSCYAVIADLPGAGALAYRLKVAAYSDLAAQEELRVEQSIFVHSPQKNSVWYNISVQP MARRRKKFLFWRIADISHLQECREVFFSNLQEAINHLDQAPVGFLSVNTQGTILYANAIFAEWFSIDLANFTVGKYSFDQ LFDSVGANSSWSDICLQNNKYQSSGYSLPYRFSLSLNSEIGLKILNCFMCASSLLEDKVIYRIVVIPQKIQKEENDNQLK LPSVLVEYFDASPFAIAVVKQEGQLLYMNNAFLSLMGCTGNINLYDVISRRDRVQLERAFLKITTNKNYSVSIETVLENS EERHLRLHVMSITPYHDDALRDLIIISVIETTEQKTLEDKMMQNQKMQAVGQLAGGIAHDFNNVLTAILMSCDLLLNTHR SFDPAYADLINIKNNANRAAALVQQLLAFSRKQTLQPEKVDFTELLSDIRNLILPLLGNNIQLKIIHGRDLWSVEVDQAS FQRVIMNLVINARDAMPNGGIVTIATNNITKQQSAEFHHVGFGFGEYVQLTISDTGTGISAAVQEKMFEPFFTTKEVGKG TGLGLSMVYGIIKQTGGYIYCDSREGEGTTFHIFLPRYIPDTVHVGSQQIEKVEEQEKNTDLTGSATILLVEDEDAVRMG GVRALQMRGYTVLEAATGVEALAVLEENKGAVDIVISDVVMPEMDGPTLLKESRKNYPDIKFIFVSGYAKDAFAKNLPQD AVFSFLSKPFTLKQLALKVKETLTQ
Sequences:
>Translated_825_residues MILRVVFVIAFLFILGLLGFFYPQGFLQKATLIFFLALAIIGGAALVLVGMGILRYNAAQLYEDFDFTIFNNTDDAIIIS DLSGFVYYSNQNYQKIFTYKPNSSCYAVIADLPGAGALAYRLKVAAYSDLAAQEELRVEQSIFVHSPQKNSVWYNISVQP MARRRKKFLFWRIADISHLQECREVFFSNLQEAINHLDQAPVGFLSVNTQGTILYANAIFAEWFSIDLANFTVGKYSFDQ LFDSVGANSSWSDICLQNNKYQSSGYSLPYRFSLSLNSEIGLKILNCFMCASSLLEDKVIYRIVVIPQKIQKEENDNQLK LPSVLVEYFDASPFAIAVVKQEGQLLYMNNAFLSLMGCTGNINLYDVISRRDRVQLERAFLKITTNKNYSVSIETVLENS EERHLRLHVMSITPYHDDALRDLIIISVIETTEQKTLEDKMMQNQKMQAVGQLAGGIAHDFNNVLTAILMSCDLLLNTHR SFDPAYADLINIKNNANRAAALVQQLLAFSRKQTLQPEKVDFTELLSDIRNLILPLLGNNIQLKIIHGRDLWSVEVDQAS FQRVIMNLVINARDAMPNGGIVTIATNNITKQQSAEFHHVGFGFGEYVQLTISDTGTGISAAVQEKMFEPFFTTKEVGKG TGLGLSMVYGIIKQTGGYIYCDSREGEGTTFHIFLPRYIPDTVHVGSQQIEKVEEQEKNTDLTGSATILLVEDEDAVRMG GVRALQMRGYTVLEAATGVEALAVLEENKGAVDIVISDVVMPEMDGPTLLKESRKNYPDIKFIFVSGYAKDAFAKNLPQD AVFSFLSKPFTLKQLALKVKETLTQ >Mature_825_residues MILRVVFVIAFLFILGLLGFFYPQGFLQKATLIFFLALAIIGGAALVLVGMGILRYNAAQLYEDFDFTIFNNTDDAIIIS DLSGFVYYSNQNYQKIFTYKPNSSCYAVIADLPGAGALAYRLKVAAYSDLAAQEELRVEQSIFVHSPQKNSVWYNISVQP MARRRKKFLFWRIADISHLQECREVFFSNLQEAINHLDQAPVGFLSVNTQGTILYANAIFAEWFSIDLANFTVGKYSFDQ LFDSVGANSSWSDICLQNNKYQSSGYSLPYRFSLSLNSEIGLKILNCFMCASSLLEDKVIYRIVVIPQKIQKEENDNQLK LPSVLVEYFDASPFAIAVVKQEGQLLYMNNAFLSLMGCTGNINLYDVISRRDRVQLERAFLKITTNKNYSVSIETVLENS EERHLRLHVMSITPYHDDALRDLIIISVIETTEQKTLEDKMMQNQKMQAVGQLAGGIAHDFNNVLTAILMSCDLLLNTHR SFDPAYADLINIKNNANRAAALVQQLLAFSRKQTLQPEKVDFTELLSDIRNLILPLLGNNIQLKIIHGRDLWSVEVDQAS FQRVIMNLVINARDAMPNGGIVTIATNNITKQQSAEFHHVGFGFGEYVQLTISDTGTGISAAVQEKMFEPFFTTKEVGKG TGLGLSMVYGIIKQTGGYIYCDSREGEGTTFHIFLPRYIPDTVHVGSQQIEKVEEQEKNTDLTGSATILLVEDEDAVRMG GVRALQMRGYTVLEAATGVEALAVLEENKGAVDIVISDVVMPEMDGPTLLKESRKNYPDIKFIFVSGYAKDAFAKNLPQD AVFSFLSKPFTLKQLALKVKETLTQ
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=244, Percent_Identity=28.6885245901639, Blast_Score=110, Evalue=4e-25, Organism=Escherichia coli, GI1788549, Length=264, Percent_Identity=29.9242424242424, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1788713, Length=227, Percent_Identity=31.2775330396476, Blast_Score=90, Evalue=8e-19, Organism=Escherichia coli, GI48994928, Length=495, Percent_Identity=24.4444444444444, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790300, Length=275, Percent_Identity=26.5454545454545, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI87081816, Length=205, Percent_Identity=24.390243902439, Blast_Score=68, Evalue=3e-12, Organism=Escherichia coli, GI1790346, Length=254, Percent_Identity=25.9842519685039, Blast_Score=68, Evalue=3e-12, Organism=Escherichia coli, GI1788905, Length=120, Percent_Identity=36.6666666666667, Blast_Score=66, Evalue=1e-11, Organism=Escherichia coli, GI145693157, Length=271, Percent_Identity=25.830258302583, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 92418; Mature: 92418
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRVVFVIAFLFILGLLGFFYPQGFLQKATLIFFLALAIIGGAALVLVGMGILRYNAAQ CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LYEDFDFTIFNNTDDAIIISDLSGFVYYSNQNYQKIFTYKPNSSCYAVIADLPGAGALAY HHCCCCEEEECCCCCEEEEEECCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEE RLKVAAYSDLAAQEELRVEQSIFVHSPQKNSVWYNISVQPMARRRKKFLFWRIADISHLQ EEEEEHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECHHHHHHHHEEEEEEHHHHHHH ECREVFFSNLQEAINHLDQAPVGFLSVNTQGTILYANAIFAEWFSIDLANFTVGKYSFDQ HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHHHHHHHEEEECCEEECCCCHHH LFDSVGANSSWSDICLQNNKYQSSGYSLPYRFSLSLNSEIGLKILNCFMCASSLLEDKVI HHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEE YRIVVIPQKIQKEENDNQLKLPSVLVEYFDASPFAIAVVKQEGQLLYMNNAFLSLMGCTG EEEEEECHHHCCCCCCCCEEHHHHHHHHHCCCCEEEEEEECCCCEEEEECCEEEEEECCC NINLYDVISRRDRVQLERAFLKITTNKNYSVSIETVLENSEERHLRLHVMSITPYHDDAL CCCHHHHHCCHHHHHHEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCHHH RDLIIISVIETTEQKTLEDKMMQNQKMQAVGQLAGGIAHDFNNVLTAILMSCDLLLNTHR HHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SFDPAYADLINIKNNANRAAALVQQLLAFSRKQTLQPEKVDFTELLSDIRNLILPLLGNN CCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC IQLKIIHGRDLWSVEVDQASFQRVIMNLVINARDAMPNGGIVTIATNNITKQQSAEFHHV EEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEE GFGFGEYVQLTISDTGTGISAAVQEKMFEPFFTTKEVGKGTGLGLSMVYGIIKQTGGYIY CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCEEE CDSREGEGTTFHIFLPRYIPDTVHVGSQQIEKVEEQEKNTDLTGSATILLVEDEDAVRMG EECCCCCCCEEEEEECCCCCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHC GVRALQMRGYTVLEAATGVEALAVLEENKGAVDIVISDVVMPEMDGPTLLKESRKNYPDI CEEEEEECCEEEEEHHCCHHEEEEEECCCCEEEEEEECEECCCCCCCHHHHHHCCCCCCE KFIFVSGYAKDAFAKNLPQDAVFSFLSKPFTLKQLALKVKETLTQ EEEEEECCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MILRVVFVIAFLFILGLLGFFYPQGFLQKATLIFFLALAIIGGAALVLVGMGILRYNAAQ CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LYEDFDFTIFNNTDDAIIISDLSGFVYYSNQNYQKIFTYKPNSSCYAVIADLPGAGALAY HHCCCCEEEECCCCCEEEEEECCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEE RLKVAAYSDLAAQEELRVEQSIFVHSPQKNSVWYNISVQPMARRRKKFLFWRIADISHLQ EEEEEHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECHHHHHHHHEEEEEEHHHHHHH ECREVFFSNLQEAINHLDQAPVGFLSVNTQGTILYANAIFAEWFSIDLANFTVGKYSFDQ HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHHHHHHHEEEECCEEECCCCHHH LFDSVGANSSWSDICLQNNKYQSSGYSLPYRFSLSLNSEIGLKILNCFMCASSLLEDKVI HHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEE YRIVVIPQKIQKEENDNQLKLPSVLVEYFDASPFAIAVVKQEGQLLYMNNAFLSLMGCTG EEEEEECHHHCCCCCCCCEEHHHHHHHHHCCCCEEEEEEECCCCEEEEECCEEEEEECCC NINLYDVISRRDRVQLERAFLKITTNKNYSVSIETVLENSEERHLRLHVMSITPYHDDAL CCCHHHHHCCHHHHHHEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCHHH RDLIIISVIETTEQKTLEDKMMQNQKMQAVGQLAGGIAHDFNNVLTAILMSCDLLLNTHR HHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SFDPAYADLINIKNNANRAAALVQQLLAFSRKQTLQPEKVDFTELLSDIRNLILPLLGNN CCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC IQLKIIHGRDLWSVEVDQASFQRVIMNLVINARDAMPNGGIVTIATNNITKQQSAEFHHV EEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEE GFGFGEYVQLTISDTGTGISAAVQEKMFEPFFTTKEVGKGTGLGLSMVYGIIKQTGGYIY CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCEEE CDSREGEGTTFHIFLPRYIPDTVHVGSQQIEKVEEQEKNTDLTGSATILLVEDEDAVRMG EECCCCCCCEEEEEECCCCCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHC GVRALQMRGYTVLEAATGVEALAVLEENKGAVDIVISDVVMPEMDGPTLLKESRKNYPDI CEEEEEECCEEEEEHHCCHHEEEEEECCCCEEEEEEECEECCCCCCCHHHHHHCCCCCCE KFIFVSGYAKDAFAKNLPQDAVFSFLSKPFTLKQLALKVKETLTQ EEEEEECCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA