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The map label for this gene is ssb3 [H]

Identifier: 49475703

GI number: 49475703

Start: 1043819

End: 1044265

Strand: Reverse

Name: ssb3 [H]

Synonym: BH09470

Alternate gene names: 49475703

Gene position: 1044265-1043819 (Counterclockwise)

Preceding gene: 49475706

Following gene: 49475702

Centisome position: 54.08

GC content: 38.48

Gene sequence:

>447_bases
ATGCTCAATAAAGTGATGTTAATTGGCTATTTAGGGGATGATCCTGAGAGCAAAACGATGACTTCTGGTGCTGAGGTAGT
CAATTTTCGTATGGCAACCTTTGAAAGCTATATGAATAAAAATACGCACCAAAAAGTAGAAAAAACAGAATGGCATTCCG
TAGTGGTTTTTAATCCGCATTTTGCAAAAATAGCACTTCAGTATCTACACAAAGGTTCAAAGGTTTACATAGAAGGCAAA
TTACAAACCCGTAAATGGCAAGATAAAAATGGACATGACCGTTACACAACAGAAATTGTCCTGCCACAATATAAAGGCGA
GTTGCATTTACTTGATGCAAAGAAAGAGCAATCTGCGTCCTCTTCGTCTGTCACTTCTCAAAGTTATGCTATCGCTTCAG
GTGCTGATGATTATGGCATATCTGCTCATGACAGCATGCCATTTTGA

Upstream 100 bases:

>100_bases
TGTTAATAATAAATAATATCTATTTGAAATAATGGAAAAAATAAACAAATTGTGCTAAGATTTTTTACATATTTAAATAC
AATTTAAGGTAAGTGAAAAC

Downstream 100 bases:

>100_bases
TTAAAAAATAGAGCAAAAATAAGAATGTGGATTTCCACAGATACGGGGGATGTATGAGAAAGAAAGATGCCTACATTTCA
CAAGTGAAAGTACGTCAAGA

Product: single-strand binding protein (ssb)

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLNKVMLIGYLGDDPESKTMTSGAEVVNFRMATFESYMNKNTHQKVEKTEWHSVVVFNPHFAKIALQYLHKGSKVYIEGK
LQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSASSSSVTSQSYAIASGADDYGISAHDSMPF

Sequences:

>Translated_148_residues
MLNKVMLIGYLGDDPESKTMTSGAEVVNFRMATFESYMNKNTHQKVEKTEWHSVVVFNPHFAKIALQYLHKGSKVYIEGK
LQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSASSSSVTSQSYAIASGADDYGISAHDSMPF
>Mature_148_residues
MLNKVMLIGYLGDDPESKTMTSGAEVVNFRMATFESYMNKNTHQKVEKTEWHSVVVFNPHFAKIALQYLHKGSKVYIEGK
LQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSASSSSVTSQSYAIASGADDYGISAHDSMPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=104, Percent_Identity=34.6153846153846, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1790494, Length=120, Percent_Identity=47.5, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16737; Mature: 16737

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKVMLIGYLGDDPESKTMTSGAEVVNFRMATFESYMNKNTHQKVEKTEWHSVVVFNPH
CCCCEEEEEEECCCCCCCEECCCCHHEEHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCH
FAKIALQYLHKGSKVYIEGKLQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSAS
HHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCC
SSSVTSQSYAIASGADDYGISAHDSMPF
CCCCCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNKVMLIGYLGDDPESKTMTSGAEVVNFRMATFESYMNKNTHQKVEKTEWHSVVVFNPH
CCCCEEEEEEECCCCCCCEECCCCHHEEHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCH
FAKIALQYLHKGSKVYIEGKLQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSAS
HHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCC
SSSVTSQSYAIASGADDYGISAHDSMPF
CCCCCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8225607 [H]