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The map label for this gene is ybcS [C]

Identifier: 49475660

GI number: 49475660

Start: 1012321

End: 1012782

Strand: Reverse

Name: ybcS [C]

Synonym: BH08990

Alternate gene names: 49475660

Gene position: 1012782-1012321 (Counterclockwise)

Preceding gene: 49475664

Following gene: 49475659

Centisome position: 52.45

GC content: 40.91

Gene sequence:

>462_bases
TTGCGTCAATATGAGCAAGCAGTTGAGAAAGCGGTTTATGTCGACTTAAGTGATGAGCAATTTGGAGCTCTTGTTAATAT
AGGGATAGCGGCTTTTCAAAACTCTACATTGCTTAAGAAGCTTAATAAAGGCGATTATGAATCTGTGCCAATTGAATTGC
AGAAATGGACTAAAGCGGGAGGAAAGCGTTTAAAAGACCTTGTACACCGTCGTGCAGCAGAGGCAGGATTATGGGCTAAG
AGTGCTTATGTTTCGTCTAATTATCAGCTCGTTGAAAAACAAGAACCAACAGGGATTTTAAAAGCAGAAATTCTTGCTCC
TATTATAGCTTCTTTTTCGGGACTTGGGGAATTTTTAGCAGGGAGTGGTCCTGTGCAATGGGCTTTAGCAACGATTATGG
TTTGTGTGTCCTGTCTGGGATTAGTATTTATTGCTAAGCGCTTACGAGAGCAACGTTTATGA

Upstream 100 bases:

>100_bases
ATTATATTTGCCAGCTCCCAATGTTGCGACAGCCTTGCATTAAGACGGTTCATAAGAGCCATTTTAAATCCTTTCTTATA
CAAATTTTATCCACACATTT

Downstream 100 bases:

>100_bases
TCTTGTGGGGAAAAAGATATTTTGTGGTGGTAATGGCGGTTTTAACCGCTTTTTTTGTAGCCTTAGTTAGGGTTTTTCGT
TTGGGGAAGAAGACTGAACG

Product: hypothetical protein

Products: Hydrolysed Peptidoglycan; Chitodextrin [C]

Alternate protein names: Lysozyme; Phage-Related Lysozyme; Phage Lysozyme; Glycoside Hydrolase Family

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MRQYEQAVEKAVYVDLSDEQFGALVNIGIAAFQNSTLLKKLNKGDYESVPIELQKWTKAGGKRLKDLVHRRAAEAGLWAK
SAYVSSNYQLVEKQEPTGILKAEILAPIIASFSGLGEFLAGSGPVQWALATIMVCVSCLGLVFIAKRLREQRL

Sequences:

>Translated_153_residues
MRQYEQAVEKAVYVDLSDEQFGALVNIGIAAFQNSTLLKKLNKGDYESVPIELQKWTKAGGKRLKDLVHRRAAEAGLWAK
SAYVSSNYQLVEKQEPTGILKAEILAPIIASFSGLGEFLAGSGPVQWALATIMVCVSCLGLVFIAKRLREQRL
>Mature_153_residues
MRQYEQAVEKAVYVDLSDEQFGALVNIGIAAFQNSTLLKKLNKGDYESVPIELQKWTKAGGKRLKDLVHRRAAEAGLWAK
SAYVSSNYQLVEKQEPTGILKAEILAPIIASFSGLGEFLAGSGPVQWALATIMVCVSCLGLVFIAKRLREQRL

Specific function: Essential For Lysis Of Bacterial Cell Wall, By Showing Cell Wall Hydrolyzing Activity (By Similarity). [C]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.17 [C]

Molecular weight: Translated: 16842; Mature: 16842

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQYEQAVEKAVYVDLSDEQFGALVNIGIAAFQNSTLLKKLNKGDYESVPIELQKWTKAG
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHH
GKRLKDLVHRRAAEAGLWAKSAYVSSNYQLVEKQEPTGILKAEILAPIIASFSGLGEFLA
HHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
GSGPVQWALATIMVCVSCLGLVFIAKRLREQRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRQYEQAVEKAVYVDLSDEQFGALVNIGIAAFQNSTLLKKLNKGDYESVPIELQKWTKAG
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHH
GKRLKDLVHRRAAEAGLWAKSAYVSSNYQLVEKQEPTGILKAEILAPIIASFSGLGEFLA
HHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
GSGPVQWALATIMVCVSCLGLVFIAKRLREQRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Peptidoglycan (N-acetylmuraminic acid and N-acetyl-D-glucosamine Residues); Chitodextrin (N-acetyl-D-glucosamine residues) [C]

Specific reaction: Hydrolysis of beta-linkage between N-acetylmuraminic acid and N-acetyl- D-glucosamine residues in peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrin [C]

General reaction: O-Glycosyl bond hydrolysis; glycosyltransfer to saccharides other alcohols and H2O [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA