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The map label for this gene is ntrC [H]

Identifier: 49475508

GI number: 49475508

Start: 839062

End: 839424

Strand: Reverse

Name: ntrC [H]

Synonym: BH07280

Alternate gene names: 49475508

Gene position: 839424-839062 (Counterclockwise)

Preceding gene: 49475509

Following gene: 49475493

Centisome position: 43.47

GC content: 42.42

Gene sequence:

>363_bases
ATGAAAAGAATCCTGCTCGCAGAAGATGATAACGATATGCGCCGTTTTCTAGCAAAAGCTCTAGAACGTGCCGGCTACGA
AGTGGCCGATTTCGATAATGGTGCTAGCGCCTATGAACGTTTACAAGAAGAAGCATTTTCTCTTCTCCTTACTGATATTG
TGATGCCAGAAATGGATGGAATCGAACTAGCACGACGCGCTACTGAAATTGATCCTGATTTACGAGTAATGTTCATTACA
GGCTTTGCAGCAGTTGCACTCAATTCAAATAGCGATGCCCCTCCAGATGCAAAAGTGCTTTCTAAACCCTTTCACTTACG
TGATCTTGTGAATGAGGTTGAAAAAATACTTATAGCTGCTTAG

Upstream 100 bases:

>100_bases
ATTCCAATTATGAGCATTTTATCACTTTTTTTATAAATACTCTATATTGTATAATCAATGAGGCAAAAACTCTGACGAAT
GGAGTAATTGGAACATAATC

Downstream 100 bases:

>100_bases
AGGCGATATTTTTCTAAATTATTCGTGACTGATTAAAGAAAAAATTAAATTAGGCATTGACGTTTGTAATTCTATGTGGT
GTATGCAACTTCATTGAGTG

Product: response regulator

Products: NADP; 2 glutathione [C]

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKRILLAEDDNDMRRFLAKALERAGYEVADFDNGASAYERLQEEAFSLLLTDIVMPEMDGIELARRATEIDPDLRVMFIT
GFAAVALNSNSDAPPDAKVLSKPFHLRDLVNEVEKILIAA

Sequences:

>Translated_120_residues
MKRILLAEDDNDMRRFLAKALERAGYEVADFDNGASAYERLQEEAFSLLLTDIVMPEMDGIELARRATEIDPDLRVMFIT
GFAAVALNSNSDAPPDAKVLSKPFHLRDLVNEVEKILIAA
>Mature_120_residues
MKRILLAEDDNDMRRFLAKALERAGYEVADFDNGASAYERLQEEAFSLLLTDIVMPEMDGIELARRATEIDPDLRVMFIT
GFAAVALNSNSDAPPDAKVLSKPFHLRDLVNEVEKILIAA

Specific function: Member of the two-component regulatory system ntrB/ntrC involved in the activation of nitrogen assimilatory genes such as glnA. NtrC is phosphorylated by ntrB and interacts with sigma-54 [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011006
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078
- InterPro:   IPR010114
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 13411; Mature: 13411

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILLAEDDNDMRRFLAKALERAGYEVADFDNGASAYERLQEEAFSLLLTDIVMPEMDG
CCCEEEECCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
IELARRATEIDPDLRVMFITGFAAVALNSNSDAPPDAKVLSKPFHLRDLVNEVEKILIAA
HHHHHHHHCCCCCCEEEEEECHHHEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRILLAEDDNDMRRFLAKALERAGYEVADFDNGASAYERLQEEAFSLLLTDIVMPEMDG
CCCEEEECCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
IELARRATEIDPDLRVMFITGFAAVALNSNSDAPPDAKVLSKPFHLRDLVNEVEKILIAA
HHHHHHHHCCCCCCEEEEEECHHHEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADPH2; oxidized glutathione [C]

Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]

General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7553451 [H]