Definition Bartonella henselae str. Houston-1, complete genome.
Accession NC_005956
Length 1,931,047

Click here to switch to the map view.

The map label for this gene is 49475473

Identifier: 49475473

GI number: 49475473

Start: 810104

End: 810835

Strand: Reverse

Name: 49475473

Synonym: BH06900

Alternate gene names: NA

Gene position: 810835-810104 (Counterclockwise)

Preceding gene: 49475474

Following gene: 49475472

Centisome position: 41.99

GC content: 38.93

Gene sequence:

>732_bases
ATGCGAAACTTTATTACAACATCTGAAAACAATTTTCAAAACACAACAGTCCAAACTATGTCTAGCCGTGAAATTGCAGA
GTTATGCGGTAAAAGACATGACCATGTTATGCGTGATATCAAGAAAATGCTTGAAGAACTTAACGCCCCCAAATTTGGGG
TGGTTGATTTTAGTGGTTATTATCTTGATAGCAAAGGTGAAAGCCGCCCTTGTTATAACCTCCCCAAACGTGAATGTTTA
ATTCTCGTATCTGGTTACAGCACTGCTTTACGCGCAAAAATAATTGACCGCTGGCAAGAATTGGAAAAGCAAGCAATAAC
ACCACAAATCGACTATTCAAGTCCAAAAGCTATGATTGGCTTTTTGAATTACCTACAAGGTCAAATAGATCAAAAAGACA
CCATCATTGAAGATTTAACACCAAAAGCCATGGCTCTTGAAAGCTTACAGCGCCATGATGGGCTCTTCGGTCTTACAGAA
GCTGCTAAAATACTCGAGATGCAACCAAAACAATTCATTCAATTTTTACAGCAAAAAGGTTGGGTTTACAGACGTGCAGC
AGGTGGAAATTTGCTTCCGTATCAAGACAAAATCCAAAAGCAACTGATGGATTGTCCAACCATCACGCTTCAAACCGCAA
GTGGAATAGAAAAAGTCATTCCTTGCGCAAAAATCACCACAAAAGGCATTGGTGTGTTGTCTGAAGAAATCAAAAAACAA
AGCATGCATTAA

Upstream 100 bases:

>100_bases
AAATTCACGTAGCAAAGAAAATCGCTCAAGCAGAGCGCCATAGAAACTATGGCAGAATATTATACCAAGACTTGTGTTTT
CATTAATTTAGGAAGTGATG

Downstream 100 bases:

>100_bases
AAGGCAATAAGCATGGAAAAGAAATACGAACTGACTGATGAAACCACCGATATTGTAAGTTGCCATACATTGTACCGCAT
TCGTGCTTTAAGAGATTTTG

Product: anti-repressor protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRNFITTSENNFQNTTVQTMSSREIAELCGKRHDHVMRDIKKMLEELNAPKFGVVDFSGYYLDSKGESRPCYNLPKRECL
ILVSGYSTALRAKIIDRWQELEKQAITPQIDYSSPKAMIGFLNYLQGQIDQKDTIIEDLTPKAMALESLQRHDGLFGLTE
AAKILEMQPKQFIQFLQQKGWVYRRAAGGNLLPYQDKIQKQLMDCPTITLQTASGIEKVIPCAKITTKGIGVLSEEIKKQ
SMH

Sequences:

>Translated_243_residues
MRNFITTSENNFQNTTVQTMSSREIAELCGKRHDHVMRDIKKMLEELNAPKFGVVDFSGYYLDSKGESRPCYNLPKRECL
ILVSGYSTALRAKIIDRWQELEKQAITPQIDYSSPKAMIGFLNYLQGQIDQKDTIIEDLTPKAMALESLQRHDGLFGLTE
AAKILEMQPKQFIQFLQQKGWVYRRAAGGNLLPYQDKIQKQLMDCPTITLQTASGIEKVIPCAKITTKGIGVLSEEIKKQ
SMH
>Mature_243_residues
MRNFITTSENNFQNTTVQTMSSREIAELCGKRHDHVMRDIKKMLEELNAPKFGVVDFSGYYLDSKGESRPCYNLPKRECL
ILVSGYSTALRAKIIDRWQELEKQAITPQIDYSSPKAMIGFLNYLQGQIDQKDTIIEDLTPKAMALESLQRHDGLFGLTE
AAKILEMQPKQFIQFLQQKGWVYRRAAGGNLLPYQDKIQKQLMDCPTITLQTASGIEKVIPCAKITTKGIGVLSEEIKKQ
SMH

Specific function: Unknown

COG id: COG3646

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27652; Mature: 27652

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNFITTSENNFQNTTVQTMSSREIAELCGKRHDHVMRDIKKMLEELNAPKFGVVDFSGY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCE
YLDSKGESRPCYNLPKRECLILVSGYSTALRAKIIDRWQELEKQAITPQIDYSSPKAMIG
EECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
FLNYLQGQIDQKDTIIEDLTPKAMALESLQRHDGLFGLTEAAKILEMQPKQFIQFLQQKG
HHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCC
WVYRRAAGGNLLPYQDKIQKQLMDCPTITLQTASGIEKVIPCAKITTKGIGVLSEEIKKQ
CEEEECCCCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SMH
CCC
>Mature Secondary Structure
MRNFITTSENNFQNTTVQTMSSREIAELCGKRHDHVMRDIKKMLEELNAPKFGVVDFSGY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCE
YLDSKGESRPCYNLPKRECLILVSGYSTALRAKIIDRWQELEKQAITPQIDYSSPKAMIG
EECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
FLNYLQGQIDQKDTIIEDLTPKAMALESLQRHDGLFGLTEAAKILEMQPKQFIQFLQQKG
HHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCC
WVYRRAAGGNLLPYQDKIQKQLMDCPTITLQTASGIEKVIPCAKITTKGIGVLSEEIKKQ
CEEEECCCCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SMH
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA