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The map label for this gene is 49475280

Identifier: 49475280

GI number: 49475280

Start: 564775

End: 565602

Strand: Reverse

Name: 49475280

Synonym: BH04850

Alternate gene names: NA

Gene position: 565602-564775 (Counterclockwise)

Preceding gene: 49475281

Following gene: 49475279

Centisome position: 29.29

GC content: 39.25

Gene sequence:

>828_bases
ATGTTAAATCATACTCCGTGCTCAATCACATATGAAGAACTGTTAAGCTTCTATAAAGAAAGCGGTGTAGATACTGCCTT
AACAGATCTACCTATTGATCGCTTTAGTCAATCTGCTTCTTTAGAAAAAAAATCAACACAAGTAGTAAAGATTTCTCATA
ATCAACAGACATCGCCATCCATAAAGTTAGACAATCATCCGCTTTCTAACTCTACTATCATACAAGGTGAACTTTCGGCT
ATAGAGAGTGCAAAAAATGCGAATACACTTGATGAATTAAAATCTGCTCTCCTCGCGTTTAATGGCTGCTCATTAAAATT
GACAGCAAAAAATACCTGTTTTTCAGATGGAACAGCAGGAAGTCCTCTCATGCTTATAGGAGAAGCACCAGGACGAGAGG
AAGATATACAAGGAATTCCTTTTGTAGGGAAAGCAGGAATGTTACTGAATAAAATTCTTGCATCAATTGGCTTAACAAGA
AATAGTGTTTACATAGCTAATACTATTCCTTGGCGTCCACCAGGAAATCGCACACCCACGCCAAGAGAAGTTGCATTATG
CCGCCCTTTCATTGAACGGCAAATTTATTTAGCTAATCCTCGTATTCTTATAGCACTGGGAGGGGTTGCGACACAGTTCC
TTACGGGAGCGCAAAATGGAATTATCCGAACCCGAGGTAAATGGCTCACCTATAAAAGCGAGAACAACATAAAAATACCT
GTTATGCCAACCTTTCACCCTGCTTATCTTCTTCGAACGCCGAGTCAGAAAAAGCTTACGTGGCTAGACTTTCTAGAAGT
AAAAAATCGCTTAGACAGCCTTTTATAA

Upstream 100 bases:

>100_bases
ATTGTTTCCTACATAAAAATTACTCATAAACACATCATAAAGCTTGAAGGATAATTTTATCTGCTCTATTCCTAATAGAG
AGATTATAAGAAAAAATAAA

Downstream 100 bases:

>100_bases
TTGGTTAATTCTGCTTTACCTCAACGCGTAAGCTCTCTTTTAATTTGTAACTTTTAAACACTAATAGGAAAAAATTATGC
AACAATCATCAGTCCCTATT

Product: DNA polymerase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase-Related Protein; DNA Glycosylase; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; DNA Polymerase Bacteriophage-Type Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MLNHTPCSITYEELLSFYKESGVDTALTDLPIDRFSQSASLEKKSTQVVKISHNQQTSPSIKLDNHPLSNSTIIQGELSA
IESAKNANTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGSPLMLIGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTR
NSVYIANTIPWRPPGNRTPTPREVALCRPFIERQIYLANPRILIALGGVATQFLTGAQNGIIRTRGKWLTYKSENNIKIP
VMPTFHPAYLLRTPSQKKLTWLDFLEVKNRLDSLL

Sequences:

>Translated_275_residues
MLNHTPCSITYEELLSFYKESGVDTALTDLPIDRFSQSASLEKKSTQVVKISHNQQTSPSIKLDNHPLSNSTIIQGELSA
IESAKNANTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGSPLMLIGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTR
NSVYIANTIPWRPPGNRTPTPREVALCRPFIERQIYLANPRILIALGGVATQFLTGAQNGIIRTRGKWLTYKSENNIKIP
VMPTFHPAYLLRTPSQKKLTWLDFLEVKNRLDSLL
>Mature_275_residues
MLNHTPCSITYEELLSFYKESGVDTALTDLPIDRFSQSASLEKKSTQVVKISHNQQTSPSIKLDNHPLSNSTIIQGELSA
IESAKNANTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGSPLMLIGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTR
NSVYIANTIPWRPPGNRTPTPREVALCRPFIERQIYLANPRILIALGGVATQFLTGAQNGIIRTRGKWLTYKSENNIKIP
VMPTFHPAYLLRTPSQKKLTWLDFLEVKNRLDSLL

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 30278; Mature: 30278

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNHTPCSITYEELLSFYKESGVDTALTDLPIDRFSQSASLEKKSTQVVKISHNQQTSPS
CCCCCCCCEEHHHHHHHHHHCCCCHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCC
IKLDNHPLSNSTIIQGELSAIESAKNANTLDELKSALLAFNGCSLKLTAKNTCFSDGTAG
EEECCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
SPLMLIGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTRNSVYIANTIPWRPPGNRTPT
CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
PREVALCRPFIERQIYLANPRILIALGGVATQFLTGAQNGIIRTRGKWLTYKSENNIKIP
CHHHHHHHHHHHCEEEEECCEEEEEECCHHHHHHHCCCCCEEEECCCEEEEECCCCEEEE
VMPTFHPAYLLRTPSQKKLTWLDFLEVKNRLDSLL
EECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNHTPCSITYEELLSFYKESGVDTALTDLPIDRFSQSASLEKKSTQVVKISHNQQTSPS
CCCCCCCCEEHHHHHHHHHHCCCCHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCC
IKLDNHPLSNSTIIQGELSAIESAKNANTLDELKSALLAFNGCSLKLTAKNTCFSDGTAG
EEECCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
SPLMLIGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTRNSVYIANTIPWRPPGNRTPT
CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
PREVALCRPFIERQIYLANPRILIALGGVATQFLTGAQNGIIRTRGKWLTYKSENNIKIP
CHHHHHHHHHHHCEEEEECCEEEEEECCHHHHHHHCCCCCEEEECCCEEEEECCCCEEEE
VMPTFHPAYLLRTPSQKKLTWLDFLEVKNRLDSLL
EECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA