| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
Click here to switch to the map view.
The map label for this gene is 49475263
Identifier: 49475263
GI number: 49475263
Start: 540274
End: 540870
Strand: Reverse
Name: 49475263
Synonym: BH04680
Alternate gene names: NA
Gene position: 540870-540274 (Counterclockwise)
Preceding gene: 49475264
Following gene: 49475262
Centisome position: 28.01
GC content: 39.03
Gene sequence:
>597_bases ATGTTTGTTAAGATCATTATTCCCTTTTCCATTTTTGTTTCCTCCATTTTATGTGGAACACTGAGTGTCGATTATATCCT CAATTCTTTTAATCATTTTGGACGCTTCACAATTGGAGAATGGAGTGCTTACCCTCAAATGGGAACATCCAACACTGATC CATATACGCGCGCACGCGCTGCCAAGCGAGGTGATATTTCAATTGGGCGCACTGAAGGACTTATTTTTCAAATTTGGAAA GATAACCACGGACGTCCACTAAAACCCAATTGCCATTACTTACTTAAAGGCCACATCCCTGAAACACACCTCTTTACGCT TTATACAGCTGATAGATCACTCAAACCATACACTTCATCCAAGGAAATACCTTTCGAACTCTACACAAACAATATTATCT ATGAAAATGATGGCTCATTACGCATTAATATTTCGCCAACACCGCAAAGTGGTAATTGGCTTGCAACGGTTAGTCAAAAA GAATTCGGACTTATTCTTACTCTATATGACACCCCAATTATCTCTGCAACAGCATTGCAAAAGCTCACCATGCCATCTGT AGAACAAATTCCATCAGGACAAATAAACTGTGATTAA
Upstream 100 bases:
>100_bases GTACGTCTGATTAACAACGATCTGAAAAAGCTATCTGTAATCTCTTTAAAAAGGGAAACTATCGGAGCTTCAAAACTTTG AATTCGAGATATTTTCTATC
Downstream 100 bases:
>100_bases ATTCTTTCACGCCGCACTTCTTGCAATCATTGGCGCTATCATTGTCCATATTTGCGTTCTCTTTCTGATACCCTATTGGG CAAAAAATAATATATGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MFVKIIIPFSIFVSSILCGTLSVDYILNSFNHFGRFTIGEWSAYPQMGTSNTDPYTRARAAKRGDISIGRTEGLIFQIWK DNHGRPLKPNCHYLLKGHIPETHLFTLYTADRSLKPYTSSKEIPFELYTNNIIYENDGSLRINISPTPQSGNWLATVSQK EFGLILTLYDTPIISATALQKLTMPSVEQIPSGQINCD
Sequences:
>Translated_198_residues MFVKIIIPFSIFVSSILCGTLSVDYILNSFNHFGRFTIGEWSAYPQMGTSNTDPYTRARAAKRGDISIGRTEGLIFQIWK DNHGRPLKPNCHYLLKGHIPETHLFTLYTADRSLKPYTSSKEIPFELYTNNIIYENDGSLRINISPTPQSGNWLATVSQK EFGLILTLYDTPIISATALQKLTMPSVEQIPSGQINCD >Mature_198_residues MFVKIIIPFSIFVSSILCGTLSVDYILNSFNHFGRFTIGEWSAYPQMGTSNTDPYTRARAAKRGDISIGRTEGLIFQIWK DNHGRPLKPNCHYLLKGHIPETHLFTLYTADRSLKPYTSSKEIPFELYTNNIIYENDGSLRINISPTPQSGNWLATVSQK EFGLILTLYDTPIISATALQKLTMPSVEQIPSGQINCD
Specific function: Unknown
COG id: COG5402
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22296; Mature: 22296
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVKIIIPFSIFVSSILCGTLSVDYILNSFNHFGRFTIGEWSAYPQMGTSNTDPYTRARA CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHH AKRGDISIGRTEGLIFQIWKDNHGRPLKPNCHYLLKGHIPETHLFTLYTADRSLKPYTSS CCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCC KEIPFELYTNNIIYENDGSLRINISPTPQSGNWLATVSQKEFGLILTLYDTPIISATALQ CCCCEEEEECCEEEECCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHH KLTMPSVEQIPSGQINCD HHCCCCHHHCCCCCCCCC >Mature Secondary Structure MFVKIIIPFSIFVSSILCGTLSVDYILNSFNHFGRFTIGEWSAYPQMGTSNTDPYTRARA CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHH AKRGDISIGRTEGLIFQIWKDNHGRPLKPNCHYLLKGHIPETHLFTLYTADRSLKPYTSS CCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCC KEIPFELYTNNIIYENDGSLRINISPTPQSGNWLATVSQKEFGLILTLYDTPIISATALQ CCCCEEEEECCEEEECCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHH KLTMPSVEQIPSGQINCD HHCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA