| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
Click here to switch to the map view.
The map label for this gene is 49475160
Identifier: 49475160
GI number: 49475160
Start: 416776
End: 417888
Strand: Reverse
Name: 49475160
Synonym: BH03590
Alternate gene names: NA
Gene position: 417888-416776 (Counterclockwise)
Preceding gene: 49475161
Following gene: 49475159
Centisome position: 21.64
GC content: 38.54
Gene sequence:
>1113_bases ATGTCAACTAAATTGGCTTGGACGAGACTTAATACAGACCAGTGGCTATTTAAACTCTCTGATTTACCACCTATGGAAGT CAATGTTTATGTGAAGTTGCGGATAAGAATGTTACACATGCGGGAACCTCTTTTGAATGATGCACGAATATTATCTCATT TTACTTGTTGTACAGTAAAAAGATTTGAAAAGGCGTTAGATTATTTATTTAGATCCGGACACATCATTTGTTTAGAAGAT GGACGTTTGTGGAGTTCAGATGTTGAAGAAGAACTCAATAACTCAAACGAAAATTTAAATAAGTTTTCAGAGAGAGCAAA GAAAGCAGCGCAGGCAAAATGGGAAAAATATCATAAAGCAAAAACAATGAGTGATGATCAAGATGCTAAAAATGCTAAGC ATGATGCTAACGGTATGCTTAAGGATGCTAAGCATGATGCTTGTGGGGATTTTAGCAATGCACAAGCAATGCTTAATGAT GCCATTAACAATAACAATAACATATATAATAAAAAAACTAAAACTATCGTTTTAGCAAAAAAAGAAATTGGTTCTGAAAA TTTACAAACAACGGATTTGGTTGAAGAGCCAACAGAGGTTGATGCTGTTGAGAGCCAATCAGATCAAATCGCAACATCAT CAGATAACCAACCTCCCATTCACGAGCAAGAAAACGTTCCTAAGAAAGCCAAGCGGTCAAAAGCTAATCGGGGTTGTCGA TTACCGGATGATTTCGAACCCGATTACGATTTTGCAATCGAAGAGGGCTTGCCTCCAGAGCGTGTCAAAGTCGAAATCGC AAAGTTTCGAGATTACTGGCATTCAAAAGCTGGAGCAAATGCAACCAAAATCGATTGGCAAGCAACGTGGCGTAACTGGG TGAGAAATTCAAAAAATTACAAACAAGGAGAAAATTATGGAACACAAACCAATTCCCAAACAGGACAACAGCGCGGTCGT GCCTATAGAATTACACAACACATGTCCGATTTCAAAAATGCAGACAGTCCGTACAAATTTTTGTTCGAGGATGATGCAAA ACCCTCCATTCCATTGGCTACCGGGCAAAAAGCCATCACCTGCAGAAGCGAAGAGAATTATTTCGTTGGGTAA
Upstream 100 bases:
>100_bases GGTCGTTTATGGAATCTCGATGTTGAAGAGGAACTCAATAACCTCAGTGAAGAGTTAGATAATTTTACCTTTAATAATAA TGAAGAAAAGGAGGTAAAAT
Downstream 100 bases:
>100_bases TGAAGCTTTGCAAATGCTTGATGAAAAAGCTTCTGAGGAAGAAATAAAAGCTATGTTTCTCATGCTTTCTGGTGGACTTA AAAGCCAACCTGGAGAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MSTKLAWTRLNTDQWLFKLSDLPPMEVNVYVKLRIRMLHMREPLLNDARILSHFTCCTVKRFEKALDYLFRSGHIICLED GRLWSSDVEEELNNSNENLNKFSERAKKAAQAKWEKYHKAKTMSDDQDAKNAKHDANGMLKDAKHDACGDFSNAQAMLND AINNNNNIYNKKTKTIVLAKKEIGSENLQTTDLVEEPTEVDAVESQSDQIATSSDNQPPIHEQENVPKKAKRSKANRGCR LPDDFEPDYDFAIEEGLPPERVKVEIAKFRDYWHSKAGANATKIDWQATWRNWVRNSKNYKQGENYGTQTNSQTGQQRGR AYRITQHMSDFKNADSPYKFLFEDDAKPSIPLATGQKAITCRSEENYFVG
Sequences:
>Translated_370_residues MSTKLAWTRLNTDQWLFKLSDLPPMEVNVYVKLRIRMLHMREPLLNDARILSHFTCCTVKRFEKALDYLFRSGHIICLED GRLWSSDVEEELNNSNENLNKFSERAKKAAQAKWEKYHKAKTMSDDQDAKNAKHDANGMLKDAKHDACGDFSNAQAMLND AINNNNNIYNKKTKTIVLAKKEIGSENLQTTDLVEEPTEVDAVESQSDQIATSSDNQPPIHEQENVPKKAKRSKANRGCR LPDDFEPDYDFAIEEGLPPERVKVEIAKFRDYWHSKAGANATKIDWQATWRNWVRNSKNYKQGENYGTQTNSQTGQQRGR AYRITQHMSDFKNADSPYKFLFEDDAKPSIPLATGQKAITCRSEENYFVG >Mature_369_residues STKLAWTRLNTDQWLFKLSDLPPMEVNVYVKLRIRMLHMREPLLNDARILSHFTCCTVKRFEKALDYLFRSGHIICLEDG RLWSSDVEEELNNSNENLNKFSERAKKAAQAKWEKYHKAKTMSDDQDAKNAKHDANGMLKDAKHDACGDFSNAQAMLNDA INNNNNIYNKKTKTIVLAKKEIGSENLQTTDLVEEPTEVDAVESQSDQIATSSDNQPPIHEQENVPKKAKRSKANRGCRL PDDFEPDYDFAIEEGLPPERVKVEIAKFRDYWHSKAGANATKIDWQATWRNWVRNSKNYKQGENYGTQTNSQTGQQRGRA YRITQHMSDFKNADSPYKFLFEDDAKPSIPLATGQKAITCRSEENYFVG
Specific function: Unknown
COG id: COG3756
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42524; Mature: 42393
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKLAWTRLNTDQWLFKLSDLPPMEVNVYVKLRIRMLHMREPLLNDARILSHFTCCTVK CCCCEEEEEECCHHHHEEECCCCCCEEEEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHH RFEKALDYLFRSGHIICLEDGRLWSSDVEEELNNSNENLNKFSERAKKAAQAKWEKYHKA HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KTMSDDQDAKNAKHDANGMLKDAKHDACGDFSNAQAMLNDAINNNNNIYNKKTKTIVLAK HCCCCCHHHHCCCHHHCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCEEEEEH KEIGSENLQTTDLVEEPTEVDAVESQSDQIATSSDNQPPIHEQENVPKKAKRSKANRGCR HHCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC LPDDFEPDYDFAIEEGLPPERVKVEIAKFRDYWHSKAGANATKIDWQATWRNWVRNSKNY CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCC KQGENYGTQTNSQTGQQRGRAYRITQHMSDFKNADSPYKFLFEDDAKPSIPLATGQKAIT CCCCCCCCCCCCHHHHHCCCEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEE CRSEENYFVG EECCCCCCCC >Mature Secondary Structure STKLAWTRLNTDQWLFKLSDLPPMEVNVYVKLRIRMLHMREPLLNDARILSHFTCCTVK CCCEEEEEECCHHHHEEECCCCCCEEEEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHH RFEKALDYLFRSGHIICLEDGRLWSSDVEEELNNSNENLNKFSERAKKAAQAKWEKYHKA HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KTMSDDQDAKNAKHDANGMLKDAKHDACGDFSNAQAMLNDAINNNNNIYNKKTKTIVLAK HCCCCCHHHHCCCHHHCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCEEEEEH KEIGSENLQTTDLVEEPTEVDAVESQSDQIATSSDNQPPIHEQENVPKKAKRSKANRGCR HHCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC LPDDFEPDYDFAIEEGLPPERVKVEIAKFRDYWHSKAGANATKIDWQATWRNWVRNSKNY CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCC KQGENYGTQTNSQTGQQRGRAYRITQHMSDFKNADSPYKFLFEDDAKPSIPLATGQKAIT CCCCCCCCCCCCHHHHHCCCEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEE CRSEENYFVG EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA