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The map label for this gene is ssb1 [H]

Identifier: 49475156

GI number: 49475156

Start: 414599

End: 415045

Strand: Reverse

Name: ssb1 [H]

Synonym: BH03540

Alternate gene names: 49475156

Gene position: 415045-414599 (Counterclockwise)

Preceding gene: 49475158

Following gene: 49475155

Centisome position: 21.49

GC content: 38.7

Gene sequence:

>447_bases
ATGCTCAATAAAGTGATGTTAATTGGCTATTTAGGAGATGATCCTGAGAGCAAAACGATAACTTCTGGTGCTGAGGTGGT
CAATTTTCGTATGGCAACCTCTGAAAGCTATATGAATAAAAATACGTACCAAAAAGTAGAAAAAACAGAATGGCATTCCG
TAGTGGTTTTTAATCCGCATTTTGCAAAAATAGCACTTCAGTATCTACACAAAGGTTCAAAGGTTTACATAGAAGGCAAA
TTACAAACCCGTAAATGGCAAGATAAAAACGGTCATGACCGTTACACAACAGAGATTGTCCTGCCACAATATAAAGGCGA
GTTGCATTTACTTGATGCAAAGAAAGAGCAATCTGAACACCCCTCACCCATTACTTCTCAAAATTATGCTATTGCCTCAG
GTGCTCAAGATCATAGCACAGCTCTTAATGATGGCGTCCCATTCTGA

Upstream 100 bases:

>100_bases
GTTAATAATCAATAATATCTATTTGAAATAATGGAAAAAATTAACCAAATTATGCTAAGATTTTTTACATATTTAAATAC
AATTTAAGGTAAGTGAAAAC

Downstream 100 bases:

>100_bases
TGGAAAAAATATGGCTAAAAGAAAAAAACGGACAAAACGCGGACGCCCTCGTATTAATGGATGTATCAGAGAACCCAATG
GTCGTATCTCACGGACAAAA

Product: Aingle-strand binding protein SSB

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLNKVMLIGYLGDDPESKTITSGAEVVNFRMATSESYMNKNTYQKVEKTEWHSVVVFNPHFAKIALQYLHKGSKVYIEGK
LQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSEHPSPITSQNYAIASGAQDHSTALNDGVPF

Sequences:

>Translated_148_residues
MLNKVMLIGYLGDDPESKTITSGAEVVNFRMATSESYMNKNTYQKVEKTEWHSVVVFNPHFAKIALQYLHKGSKVYIEGK
LQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSEHPSPITSQNYAIASGAQDHSTALNDGVPF
>Mature_148_residues
MLNKVMLIGYLGDDPESKTITSGAEVVNFRMATSESYMNKNTYQKVEKTEWHSVVVFNPHFAKIALQYLHKGSKVYIEGK
LQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSEHPSPITSQNYAIASGAQDHSTALNDGVPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=104, Percent_Identity=36.5384615384615, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1790494, Length=114, Percent_Identity=49.1228070175439, Blast_Score=120, Evalue=3e-29,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16800; Mature: 16800

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKVMLIGYLGDDPESKTITSGAEVVNFRMATSESYMNKNTYQKVEKTEWHSVVVFNPH
CCCCEEEEEEECCCCCCCEECCCCEEEEEEEECCHHHHCCHHHHHHHCCCCCEEEEECCH
FAKIALQYLHKGSKVYIEGKLQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSEH
HHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCC
PSPITSQNYAIASGAQDHSTALNDGVPF
CCCCCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNKVMLIGYLGDDPESKTITSGAEVVNFRMATSESYMNKNTYQKVEKTEWHSVVVFNPH
CCCCEEEEEEECCCCCCCEECCCCEEEEEEEECCHHHHCCHHHHHHHCCCCCEEEEECCH
FAKIALQYLHKGSKVYIEGKLQTRKWQDKNGHDRYTTEIVLPQYKGELHLLDAKKEQSEH
HHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCC
PSPITSQNYAIASGAQDHSTALNDGVPF
CCCCCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8225607 [H]