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The map label for this gene is yddM [C]

Identifier: 49475115

GI number: 49475115

Start: 386465

End: 386794

Strand: Reverse

Name: yddM [C]

Synonym: BH03120

Alternate gene names: 49475115

Gene position: 386794-386465 (Counterclockwise)

Preceding gene: 49475117

Following gene: 49475113

Centisome position: 20.03

GC content: 42.12

Gene sequence:

>330_bases
ATGACCACACGTAATCCTAATCGTTGTCCTTCTCATCCAGGAGAAATTTTAGCTGAATCCTTAGAACATTTAAATGCAAG
CAAAACCGAAATTGCTAGGATTCTTCAAATATCACGCCAGCACTTGCACGGTATCCTTAAAGGAGAACGTCCAGTCACAG
CCGTAACAGCAGCTCGCATTGGTAAATTGTTAGGAAATGGACCAGCCCTTTGGCTACAGCTTCAAGCCAATTATGATACA
TGGCATGCCTTGAGGGACATTGATGTCTCTTCTATTCCAACACTAACAGCTAATGAAGTAGATACGCAAATGGAACATAG
CCATTCGTAA

Upstream 100 bases:

>100_bases
GCTTGATGTTCATTTTTTAAATTTCTTTAAATGATATAATATCAATGGCATATTGTTTAAATTGTAACGGTTTTAAAATT
AATTGCAAAGAAGACTATCC

Downstream 100 bases:

>100_bases
CCTTCTCCCCACCTTTAAAGACGAGGAGATAAAGCATGTTTCACCTTAAGCAGCTTTTACAATAGTTTTTTCTAAAACTT
GCTTGGCTTCTTCAACAAGC

Product: virulence-associated protein

Products: NA

Alternate protein names: XRE Family Plasmid Maintenance System Antidote Protein; Plasmid Maintenance System Antidote Protein XRE Family; Proteic Killer Active Protein; Plasmid Maintenance System Antidote Protein

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MTTRNPNRCPSHPGEILAESLEHLNASKTEIARILQISRQHLHGILKGERPVTAVTAARIGKLLGNGPALWLQLQANYDT
WHALRDIDVSSIPTLTANEVDTQMEHSHS

Sequences:

>Translated_109_residues
MTTRNPNRCPSHPGEILAESLEHLNASKTEIARILQISRQHLHGILKGERPVTAVTAARIGKLLGNGPALWLQLQANYDT
WHALRDIDVSSIPTLTANEVDTQMEHSHS
>Mature_108_residues
TTRNPNRCPSHPGEILAESLEHLNASKTEIARILQISRQHLHGILKGERPVTAVTAARIGKLLGNGPALWLQLQANYDTW
HALRDIDVSSIPTLTANEVDTQMEHSHS

Specific function: Unknown

COG id: COG3093

COG function: function code R; Plasmid maintenance system antidote protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12062; Mature: 11931

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRNPNRCPSHPGEILAESLEHLNASKTEIARILQISRQHLHGILKGERPVTAVTAARI
CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GKLLGNGPALWLQLQANYDTWHALRDIDVSSIPTLTANEVDTQMEHSHS
HHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TTRNPNRCPSHPGEILAESLEHLNASKTEIARILQISRQHLHGILKGERPVTAVTAARI
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GKLLGNGPALWLQLQANYDTWHALRDIDVSSIPTLTANEVDTQMEHSHS
HHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA