| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49474888
Identifier: 49474888
GI number: 49474888
Start: 86412
End: 86972
Strand: Reverse
Name: 49474888
Synonym: BH00640
Alternate gene names: NA
Gene position: 86972-86412 (Counterclockwise)
Preceding gene: 49474894
Following gene: 49474886
Centisome position: 4.5
GC content: 39.93
Gene sequence:
>561_bases ATGATAACATTTATCGTCGAGCAAATGAAAGATCTCATACTTCAAATTTCAGCTTTCGTACAATATCTACTCAAAAAAGT TATCAAAAATGTGGTATGGGTTCTTCTTCTTGCTTCCATAGCCCACCCCCACCCTGCAATTGCTCAACAATATAAAGTTG GAGAGATAGAAATCCTTCATCCTTGGACACGCGCAACACCCAGAGGCATAAAAGTGGGCAGCGGCTATCTCTATATCATT AATCATAGCAATACCCCAGATCGTTTGGTTTCTGTTTCAACCAACGGAGTACAAACAACAGAAATCCACTCCATGGCAGT TGTTAACGATATTATGAAAATGGAAAAAATGCACAATGGCATTGAAATCCCAGGAAATGGGGAAATTACCCTTAAGCCTG GGGGTGATCATATTATGTTCATGGGGCTTTCACAACCATTCAAGCTAGGCGACAAAATTAGTGCAACATTAACATTTGAA AAAGCGGGAACAGTTGATGTTGAATTCTCTGTAAATGCTACGGTAGACAGATTACCTTCCAAAACAGCTCCTACGCCTTA A
Upstream 100 bases:
>100_bases TTCAGATTAGTATAACCCTCATAATTCTTTCTTTTATTTTGAACAAAATTTCTGCTAGAAATAGACATAAAGTGAATTTC ACATTAAGGAGGGTAAATAA
Downstream 100 bases:
>100_bases ATTTTTTCCTCACCATTCAAGGCACATTTCAATATGAAAATGAGAAGTATGAAAAAATTTTCATACTTCTCATTTTTTAA TGCCGTAAATATGCTATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MITFIVEQMKDLILQISAFVQYLLKKVIKNVVWVLLLASIAHPHPAIAQQYKVGEIEILHPWTRATPRGIKVGSGYLYII NHSNTPDRLVSVSTNGVQTTEIHSMAVVNDIMKMEKMHNGIEIPGNGEITLKPGGDHIMFMGLSQPFKLGDKISATLTFE KAGTVDVEFSVNATVDRLPSKTAPTP
Sequences:
>Translated_186_residues MITFIVEQMKDLILQISAFVQYLLKKVIKNVVWVLLLASIAHPHPAIAQQYKVGEIEILHPWTRATPRGIKVGSGYLYII NHSNTPDRLVSVSTNGVQTTEIHSMAVVNDIMKMEKMHNGIEIPGNGEITLKPGGDHIMFMGLSQPFKLGDKISATLTFE KAGTVDVEFSVNATVDRLPSKTAPTP >Mature_186_residues MITFIVEQMKDLILQISAFVQYLLKKVIKNVVWVLLLASIAHPHPAIAQQYKVGEIEILHPWTRATPRGIKVGSGYLYII NHSNTPDRLVSVSTNGVQTTEIHSMAVVNDIMKMEKMHNGIEIPGNGEITLKPGGDHIMFMGLSQPFKLGDKISATLTFE KAGTVDVEFSVNATVDRLPSKTAPTP
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20502; Mature: 20502
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITFIVEQMKDLILQISAFVQYLLKKVIKNVVWVLLLASIAHPHPAIAQQYKVGEIEILH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEC PWTRATPRGIKVGSGYLYIINHSNTPDRLVSVSTNGVQTTEIHSMAVVNDIMKMEKMHNG CCCCCCCCCEEECCCEEEEEECCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCC IEIPGNGEITLKPGGDHIMFMGLSQPFKLGDKISATLTFEKAGTVDVEFSVNATVDRLPS EECCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEEECCHHHHCCC KTAPTP CCCCCC >Mature Secondary Structure MITFIVEQMKDLILQISAFVQYLLKKVIKNVVWVLLLASIAHPHPAIAQQYKVGEIEILH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEC PWTRATPRGIKVGSGYLYIINHSNTPDRLVSVSTNGVQTTEIHSMAVVNDIMKMEKMHNG CCCCCCCCCEEECCCEEEEEECCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCC IEIPGNGEITLKPGGDHIMFMGLSQPFKLGDKISATLTFEKAGTVDVEFSVNATVDRLPS EECCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEEECCHHHHCCC KTAPTP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA